BLASTX 7.6.2
Query= UN68165 /QuerySize=722
(721 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 220 9e-058
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 159 1e-039
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 100 1e-021
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 68 4e-012
TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular... 68 6e-012
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 64 1e-010
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 62 3e-010
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 50 9e-007
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 220 bits (559), Expect = 9e-058
Identities = 124/189 (65%), Positives = 145/189 (76%), Gaps = 17/189 (8%)
Frame = -3
Query: 719 VEFATAGEAQNALEFHGRPLLGRELRLDVAQ---ERGERPAYNTPRSGN--GGGGGGSE- 558
VEFA++ EAQ ALEFHGRPLLGRE+RLD+AQ ERGERPA+ TP+SGN GG GG E
Sbjct: 343 VEFASSEEAQKALEFHGRPLLGREIRLDIAQERGERGERPAF-TPQSGNFRSGGDGGDEK 401
Query: 557 -VFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEKAF 381
+FVKGFD+SL +DIK+ L EHF+SCGEI VSVP+DR+TG S+GIAYLEF EG EKA
Sbjct: 402 KIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSEGKEKAL 461
Query: 380 ELNGSEM-GGWNLVVDEPRPKENNSSGRSNYGGGRDSGR-GRGRGRGGDNFRGR----GG 219
ELNGS+M GG+ LVVDEPRP+ ++S G G GR +GR G G GRG D RGR GG
Sbjct: 462 ELNGSDMGGGFYLVVDEPRPRGDSSGGG---GFGRGNGRFGSGGGRGRDGGRGRFGSGGG 518
Query: 218 RGRENGRGR 192
RGR+ GRGR
Sbjct: 519 RGRDGGRGR 527
Score = 64 bits (153), Expect = 1e-010
Identities = 39/64 (60%), Positives = 41/64 (64%), Gaps = 10/64 (15%)
Frame = -3
Query: 308 SGRSNYGG--GRDSGRGR---GRGRGGDNFRGR----GGRGRENGRGRPSFTHSDGKKTT 156
+GR GG GRD GRGR G GRG D RGR GGRG + GRGRPSFT GKKTT
Sbjct: 495 NGRFGSGGGRGRDGGRGRFGSGGGRGRDGGRGRFGSGGGRGSDRGRGRPSFT-PQGKKTT 553
Query: 155 FSDE 144
F DE
Sbjct: 554 FGDE 557
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 159 bits (402), Expect = 1e-039
Identities = 87/183 (47%), Positives = 118/183 (64%), Gaps = 12/183 (6%)
Frame = -3
Query: 719 VEFATAGEAQNALEFHGRPLLGRELRLDVAQERGERPAYNTPRSGN-GGGGGGSE---VF 552
+EFA+ EAQ ALE +G+ LLGR++RLD+A ERG TPR+ N G G GS+ ++
Sbjct: 429 IEFASPEEAQKALEMNGKLLLGRDVRLDLANERG------TPRNSNPGRKGEGSQSRTIY 482
Query: 551 VKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEKAFELN 372
V+GF SSL ++IK L HF+ CGE+TRV VP DRETG SRG AY++ G ++A +L+
Sbjct: 483 VRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLS 542
Query: 371 GSEMGGWNLVVDEPRPKENNSSGRSNYGGGRDSGRGRGRGRG--GDNFRGRGGRGRENGR 198
GSE+GG N+ V+E RP++++ SN R + RGR R G F R RGR + R
Sbjct: 543 GSEIGGGNIHVEESRPRDSDEGRSSNRAPARGAPRGRHSDRAPRGGRFSDRAPRGRHSDR 602
Query: 197 GRP 189
G P
Sbjct: 603 GAP 605
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 100 bits (247), Expect = 1e-021
Identities = 50/90 (55%), Positives = 63/90 (70%)
Frame = -3
Query: 575 GGGGSEVFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEG 396
G G V GFD+SLPV+DIKSALS++F+S GEITRV VP TGGS G AY++ KEG
Sbjct: 230 GVNGRSFSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYAYIDLKEG 289
Query: 395 TEKAFELNGSEMGGWNLVVDEPRPKENNSS 306
EKA EL ++GGW+LVV + P + S+
Sbjct: 290 AEKALELGRHDVGGWDLVVGKAEPIRSGST 319
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 68 bits (165), Expect = 4e-012
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Frame = -3
Query: 557 VFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFK-EGTE-KA 384
+ V+G+D+SL ++ AL++HFASCGEIT++ VP D + + ++++ K EG E KA
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 383 FELNGSEMGGWNLVVDEPRPKENNSS 306
+L+G+++GGW ++V +P+PK S
Sbjct: 86 LQLSGTDVGGWTVIV-KPKPKHEPPS 110
Score = 62 bits (148), Expect = 4e-010
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = -3
Query: 557 VFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFK-EGTE-KA 384
+ V+G+D+SL ++ L +HF SCGEI V VP D E G + +A+L + EG E KA
Sbjct: 115 ISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGAEDKA 174
Query: 383 FELNGSEMGGWNLVVDEPRPKENNSS 306
+L+G+++ GW ++V +NSS
Sbjct: 175 LQLSGTDVVGWTVIVKPSEIFYDNSS 200
Score = 57 bits (135), Expect = 1e-008
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = -3
Query: 551 VKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEKAFELN 372
V G+D+SLP DI+ AL +HF+SCGEI +V+V S L + +KA EL+
Sbjct: 217 VTGYDASLPEIDIQMALCKHFSSCGEIWQVTVL------SSTAFVSLRGERCVDKALELS 270
Query: 371 GSEMGGWNLVVDEP 330
G MG LVV+EP
Sbjct: 271 GCNMGERTLVVNEP 284
>TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding /
nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins
in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr5:21011418-21013657 FORWARD
Length = 413
Score = 68 bits (164), Expect = 6e-012
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = -3
Query: 626 ERGERPAYNTPRSGNGGGGGGSEVFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVD 447
E GER + + G G +FVKG+DSSL ND+ AL EHF+ CG I+R+ +
Sbjct: 175 EVGERALFIPKQGGRYDCG---TIFVKGYDSSLGENDLARALLEHFSPCGMISRIYFQTN 231
Query: 446 RETGGSRGIAYLEFKEGTEKAFELNGSEMGGWNLVVDEPRPKE 318
++ +GTE A +LNGS+MGG NL V + ++
Sbjct: 232 DAGEAVLKHVFIVMLQGTEDALKLNGSDMGGCNLEVHDATERD 274
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 64 bits (153), Expect = 1e-010
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = -3
Query: 557 VFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEKAFE 378
V V G+D+ +P DI+ AL EHF+SCGE+T+V V G YL+ + +KA +
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVV-----LPSGSGSIYLQGERCEDKALQ 184
Query: 377 LNGSEMGGWNLVVD 336
LNG +MGG NLVV+
Sbjct: 185 LNGCKMGGMNLVVE 198
Score = 63 bits (152), Expect = 1e-010
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = -3
Query: 563 SEVFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFK--EGTE 390
+++ V+G+D+ L +K L +HFASCG+IT + VP D E G + +A++ K G E
Sbjct: 29 TKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGGEE 88
Query: 389 KAFELNGSEMGGWNLVV 339
KA L+G++ GGW +V
Sbjct: 89 KALLLSGTDAGGWTAIV 105
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 62 bits (149), Expect = 3e-010
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Frame = -3
Query: 563 SEVFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEF--KEG-- 396
S++ V+G+D+S+ +K AL++HFASCG+I + VP D + + ++ F KEG
Sbjct: 21 SKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFHAKEGES 80
Query: 395 -TEKAFELNGSEMGGWNLVV 339
+KA EL+G+++GGWN+VV
Sbjct: 81 PVDKALELSGTDVGGWNVVV 100
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 50 bits (119), Expect = 9e-007
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Frame = -3
Query: 590 SGNGGGGGGSEVFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYL 411
SGN G + V G+D+ LP++D+ +AL+EHF+SCGEI + +P+ +
Sbjct: 18 SGNDVG----RIKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFD---ETNTILN 70
Query: 410 EFKEGTEKAFELNGS---EMGGWNLVVDE-PRPKENNSSGRS 297
F F N S +GGWN+ V+ P P N S R+
Sbjct: 71 RFWWLLPPPFLSNSSAQVNVGGWNVSVEAYPYPAHANDSVRA 112
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,301,091,011
Number of Sequences: 33410
Number of Extensions: 30301091011
Number of Successful Extensions: 1027421337
Number of sequences better than 0.0: 0
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