BLASTX 7.6.2
Query= UN68202 /QuerySize=690
(689 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis GN=... 73 1e-012
sp|Q1RIM1|TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (s... 69 2e-011
sp|Q9ZDK2|TOP1_RICPR DNA topoisomerase 1 OS=Rickettsia prowazeki... 69 2e-011
sp|Q68X45|TOP1_RICTY DNA topoisomerase 1 OS=Rickettsia typhi GN=... 69 3e-011
sp|P73810|TOP1_SYNY3 DNA topoisomerase 1 OS=Synechocystis sp. (s... 64 6e-010
sp|Q92IH1|TOP1_RICCN DNA topoisomerase 1 OS=Rickettsia conorii G... 64 8e-010
sp|P34185|TOP1_SYNE7 DNA topoisomerase 1 OS=Synechococcus elonga... 62 3e-009
>sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis GN=topA PE=3 SV=1
Length = 776
Score = 73 bits (178), Expect = 1e-012
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = -3
Query: 687 KLLGVHPNTSEKVILKCGPYGHYVQLGEDKKGHVPKRANASHIKDVNSITLEGALELLRY 508
K+LG + E + LK GPYG YVQLGE + PKR+ + N ITLE AL+LL
Sbjct: 654 KVLGTDKDGIE-IYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQNDITLEMALKLLSL 712
Query: 507 PLTLGNHPEDGQPVFLKLSKSGFTVRHRRTMATVPKNVEPGEVTFEKAMKLLSGKNVRL 331
PL +G H + G+ + + K G +++ ++PK + ++ + AMKL+ +L
Sbjct: 713 PLKIGIHKDSGEEIMIGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDAMKLIEDNKAKL 771
>sp|Q1RIM1|TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C)
GN=topA PE=3 SV=1
Length = 800
Score = 69 bits (168), Expect = 2e-011
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = -3
Query: 654 KVILKCGPYGHYVQLGEDKKGHV-PKRANASHIKDVNSITLEGALELLRYPLTLGNHPED 478
++ LK GPYG Y+Q GE + PKR+ + N ITL+ AL+LL PL +GNH E
Sbjct: 664 EIYLKKGPYGPYIQYGEQVDSKIKPKRSPLPAGLNQNDITLDMALKLLSLPLKIGNHKES 723
Query: 477 GQPVFLKLSKSGFTVRHRRTMATVPKNVEPGEVTFEKAMKLLSGK 343
G+ V + K G +++ ++PK + ++ + AMKL+ K
Sbjct: 724 GEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDAMKLIEEK 768
>sp|Q9ZDK2|TOP1_RICPR DNA topoisomerase 1 OS=Rickettsia prowazekii GN=topA PE=3
SV=1
Length = 776
Score = 69 bits (168), Expect = 2e-011
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -3
Query: 687 KLLGVHPNTSEKVILKCGPYGHYVQLGEDKKGHVPKRANASHIKDVNSITLEGALELLRY 508
K+LG + E + LK GPYG Y+QLGE PKR + ITLE AL+LL
Sbjct: 654 KILGTDQDGVE-IYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLKQSEITLEIALKLLNL 712
Query: 507 PLTLGNHPEDGQPVFLKLSKSGFTVRHRRTMATVPKNVEPGEVTFEKAMKLLSGKNVRL 331
PL +G H + G+ + + SK G +++ +VPK + ++ AMKL+ +L
Sbjct: 713 PLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLSLNDAMKLIQNNKAKL 771
>sp|Q68X45|TOP1_RICTY DNA topoisomerase 1 OS=Rickettsia typhi GN=topA PE=3 SV=1
Length = 779
Score = 69 bits (167), Expect = 3e-011
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -3
Query: 687 KLLGVHPNTSEKVILKCGPYGHYVQLGEDKKGHVPKRANASHIKDVNSITLEGALELLRY 508
K+LG + E + LK GPYG Y+QLGE PKR + ITLE AL+LL
Sbjct: 654 KILGTDKDGVE-IYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLKQSEITLEVALKLLSL 712
Query: 507 PLTLGNHPEDGQPVFLKLSKSGFTVRHRRTMATVPKNVEPGEVTFEKAMKLLSGKNVRL 331
PL +G H + G+ + + SK G +++ +VPK + + + A+KL+ +L
Sbjct: 713 PLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNLDDAIKLIENNKAKL 771
>sp|P73810|TOP1_SYNY3 DNA topoisomerase 1 OS=Synechocystis sp. (strain PCC 6803)
GN=topA PE=3 SV=1
Length = 898
Score = 64 bits (155), Expect = 6e-010
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Frame = -3
Query: 681 LGVHPNTSEKVILKCGPYGHYVQLGE-DKKGHVPKRANASHIKDVNSITLEGALELLRYP 505
+G+HP T E + + G YG YVQLGE ++ PKR + +TLE A+ LL P
Sbjct: 660 VGIHPETGEPIFILIGAYGPYVQLGEATEENKKPKRTSLPKGVKPEDVTLEMAVGLLALP 719
Query: 504 LTLGNHPEDGQPVFLKLSKSGFTVRH-----RRTMATVPKNVEPGEVTFEKAMKLLSGKN 340
LG HPE G+ + L + G V H + ++ + + +T E+A++LL+
Sbjct: 720 RNLGEHPESGKNIKASLGRFGPYVVHDQGKDGKDYRSLKGDDDVLTITLERALELLAEPK 779
Query: 339 VRLCGRPKRKPTVVDEEEEE 280
R K + E++E
Sbjct: 780 RGRGSRTPLKQLGLHPEDQE 799
>sp|Q92IH1|TOP1_RICCN DNA topoisomerase 1 OS=Rickettsia conorii GN=topA PE=3
SV=1
Length = 776
Score = 64 bits (154), Expect = 8e-010
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -3
Query: 687 KLLGVHPNTSEKVILKCGPYGHYVQLGEDKKGHVPKRANASHIKDVNSITLEGALELLRY 508
K+LG + E + LK GPYG Y+QLG+ + PKR+ + N ITL+ AL+LL
Sbjct: 654 KVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQNDITLDIALKLLSL 712
Query: 507 PLTLGNHPEDGQPVFLKLSKSGFTVRHRRTMATVPKNVEPGEVTFEKAMKLLSGKNVRL 331
PL +G H + + + + K G +++ +V K + ++ + AMKL+ +L
Sbjct: 713 PLKIGIHKDSDEEIMIGYGKFGPYIKYMGQFISVQKKYDFLNLSLDDAMKLIEENKAKL 771
>sp|P34185|TOP1_SYNE7 DNA topoisomerase 1 OS=Synechococcus elongatus (strain PCC
7942) GN=topA PE=3 SV=2
Length = 883
Score = 62 bits (149), Expect = 3e-009
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 681 LGVHPNTSEKVILKCGPYGHYVQLG-EDKKGHVPKRANASHIKDVNSITLEGALELLRYP 505
LG HP T E + L G YG YVQLG ++ PKRA+ + +I+LE A+ LL P
Sbjct: 660 LGTHPETDEPIYLLTGAYGPYVQLGAATEEKPKPKRASLPKGMSLETISLEQAVGLLSLP 719
Query: 504 LTLGNHPEDGQPVFLKLSKSG 442
TLG HPE G+ + L + G
Sbjct: 720 RTLGEHPETGRRIQAGLGRFG 740
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,958,350,165
Number of Sequences: 518415
Number of Extensions: 230958350165
Number of Successful Extensions: 1437040323
Number of sequences better than 0.0: 0
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