BLASTX 7.6.2
Query= UN68264 /QuerySize=728
(727 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297853052|ref|XP_002894407.1| hypothetical protein ARALYDRAFT... 111 1e-022
gi|15219110|ref|NP_175696.1| NAC domain-containing protein 18 [A... 109 5e-022
gi|21554226|gb|AAM63301.1| NAM-like protein [Arabidopsis thaliana] 109 5e-022
gi|20466640|gb|AAM20637.1| NAM-like protein [Arabidopsis thaliana] 106 3e-021
>gi|297853052|ref|XP_002894407.1| hypothetical protein ARALYDRAFT_474412
[Arabidopsis lyrata subsp. lyrata]
Length = 320
Score = 111 bits (276), Expect = 1e-022
Identities = 72/155 (46%), Positives = 88/155 (56%), Gaps = 40/155 (25%)
Frame = -3
Query: 725 HHRHLDIDKDHHHHHFHHDMTTDDDLYRLPLSIPGQNVSRVNIFPAGFSDNNDPAAIYNG 546
HH HL +D + HH HDM DD+ +R +V FPA FSDNNDP AIY+G
Sbjct: 187 HHHHLHLDNNDHH---RHDMMIDDERFR--------HVPHGLHFPAIFSDNNDPTAIYDG 235
Query: 545 GGG------YSMNHDFATSSGLNQ--KPNIPMPFWDQD--------PAKRFN-GGVGDCS 417
GGG YSMNH+FA+ S Q P + M +QD P+KRFN GG+GDCS
Sbjct: 236 GGGGYGGGNYSMNHNFASGSKQEQLFPPVMMMTSINQDSGIGSSSSPSKRFNGGGLGDCS 295
Query: 416 DIVSSVAAAPLMQQQGGVLEEGLDRTSYQLTGLNW 312
+S+AA PLMQ QGG+ YQL+GLNW
Sbjct: 296 ---TSLAATPLMQNQGGI---------YQLSGLNW 318
>gi|15219110|ref|NP_175696.1| NAC domain-containing protein 18 [Arabidopsis
thaliana]
Length = 320
Score = 109 bits (271), Expect = 5e-022
Identities = 75/156 (48%), Positives = 88/156 (56%), Gaps = 43/156 (27%)
Frame = -3
Query: 725 HHRHLDIDKDHHHHHFHHDMTTDDDLYR-LPLSIPGQNVSRVNIFPAGFSDNNDPAAIYN 549
H H+ +D DHH HDM DDD +R +P PG + FPA FSDNNDP AIY+
Sbjct: 188 HLHHIHLDNDHH----RHDMMIDDDRFRHVP---PGLH------FPAIFSDNNDPTAIYD 234
Query: 548 GGGG------YSMNHDFATSSGLNQ--KPNIPMPFWDQD--------PAKRFN-GGVGDC 420
GGGG YSMNH FA+ S Q P + M +QD P+KRFN GGVGDC
Sbjct: 235 GGGGGYGGGSYSMNHCFASGSKQEQLFPPVMMMTSLNQDSGIGSSSSPSKRFNGGGVGDC 294
Query: 419 SDIVSSVAAAPLMQQQGGVLEEGLDRTSYQLTGLNW 312
S +S+AA PLMQ QGG+ YQL GLNW
Sbjct: 295 S---TSMAATPLMQNQGGI---------YQLPGLNW 318
>gi|21554226|gb|AAM63301.1| NAM-like protein [Arabidopsis thaliana]
Length = 320
Score = 109 bits (271), Expect = 5e-022
Identities = 75/156 (48%), Positives = 88/156 (56%), Gaps = 43/156 (27%)
Frame = -3
Query: 725 HHRHLDIDKDHHHHHFHHDMTTDDDLYR-LPLSIPGQNVSRVNIFPAGFSDNNDPAAIYN 549
H H+ +D DHH HDM DDD +R +P PG + FPA FSDNNDP AIY+
Sbjct: 188 HLHHIHLDNDHH----RHDMMIDDDRFRHVP---PGLH------FPAIFSDNNDPTAIYD 234
Query: 548 GGGG------YSMNHDFATSSGLNQ--KPNIPMPFWDQD--------PAKRFN-GGVGDC 420
GGGG YSMNH FA+ S Q P + M +QD P+KRFN GGVGDC
Sbjct: 235 GGGGGYGGGSYSMNHCFASGSKQEQLFPPVMMMTSLNQDSGIGSSSSPSKRFNGGGVGDC 294
Query: 419 SDIVSSVAAAPLMQQQGGVLEEGLDRTSYQLTGLNW 312
S +S+AA PLMQ QGG+ YQL GLNW
Sbjct: 295 S---TSMAATPLMQNQGGI---------YQLPGLNW 318
>gi|20466640|gb|AAM20637.1| NAM-like protein [Arabidopsis thaliana]
Length = 320
Score = 106 bits (264), Expect = 3e-021
Identities = 74/156 (47%), Positives = 87/156 (55%), Gaps = 43/156 (27%)
Frame = -3
Query: 725 HHRHLDIDKDHHHHHFHHDMTTDDDLYR-LPLSIPGQNVSRVNIFPAGFSDNNDPAAIYN 549
H H+ +D DHH HDM DD +R +P PG + FPA FSDNNDP AIY+
Sbjct: 188 HLHHIHLDNDHH----RHDMMIGDDRFRHVP---PGLH------FPAIFSDNNDPTAIYD 234
Query: 548 GGGG------YSMNHDFATSSGLNQ--KPNIPMPFWDQD--------PAKRFN-GGVGDC 420
GGGG YSMNH FA+ S Q P + M +QD P+KRFN GGVGDC
Sbjct: 235 GGGGGYGGGSYSMNHCFASGSKQEQLFPPVMMMTSLNQDSGIGSSSSPSKRFNGGGVGDC 294
Query: 419 SDIVSSVAAAPLMQQQGGVLEEGLDRTSYQLTGLNW 312
S +S+AA PLMQ QGG+ YQL GLNW
Sbjct: 295 S---TSMAATPLMQNQGGI---------YQLPGLNW 318
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 368,101,844,212
Number of Sequences: 15229318
Number of Extensions: 368101844212
Number of Successful Extensions: 143757773
Number of sequences better than 0.0: 0
|
