BLASTX 7.6.2
Query= UN68362 /QuerySize=572
(571 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, pu... 273 5e-074
TAIR9_protein||AT4G03110.2 | Symbols: | RNA-binding protein, pu... 273 5e-074
TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, pu... 231 3e-061
TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, pu... 146 9e-036
TAIR9_protein||AT4G16280.2 | Symbols: FCA | FCA; RNA binding | c... 125 2e-029
TAIR9_protein||AT4G16280.3 | Symbols: FCA | FCA; RNA binding | c... 125 2e-029
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 47 9e-006
>TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, putative |
chr4:1376612-1379275 REVERSE
Length = 442
Score = 273 bits (698), Expect = 5e-074
Identities = 138/151 (91%), Positives = 143/151 (94%), Gaps = 1/151 (0%)
Frame = +1
Query: 118 EENREKQNNGEESVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFV 297
EENREK N EESVK+FVGQIP+HMSESQLLTLFQEFA VDEVNIIKDKITRASRGCCF+
Sbjct: 6 EENREK-NEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFL 64
Query: 298 QCPSREEADKLVNTCHNKKTLPGAASLLQVKYADGELERLEHKLFIGMLPKNVSEAELLS 477
CPSREEADKLVN CHNKKTLPGA SLLQVKYADGELERLEHKLF+GMLPKNVSEAE+ S
Sbjct: 65 LCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQS 124
Query: 478 LFSKYGTIKDLQILRGAQQTSKGCAFLKYET 570
LFSKYGTIKDLQILRGAQQTSKGCAFLKYET
Sbjct: 125 LFSKYGTIKDLQILRGAQQTSKGCAFLKYET 155
>TAIR9_protein||AT4G03110.2 | Symbols: | RNA-binding protein, putative |
chr4:1376710-1379275 REVERSE
Length = 440
Score = 273 bits (698), Expect = 5e-074
Identities = 138/151 (91%), Positives = 143/151 (94%), Gaps = 1/151 (0%)
Frame = +1
Query: 118 EENREKQNNGEESVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFV 297
EENREK N EESVK+FVGQIP+HMSESQLLTLFQEFA VDEVNIIKDKITRASRGCCF+
Sbjct: 6 EENREK-NEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFL 64
Query: 298 QCPSREEADKLVNTCHNKKTLPGAASLLQVKYADGELERLEHKLFIGMLPKNVSEAELLS 477
CPSREEADKLVN CHNKKTLPGA SLLQVKYADGELERLEHKLF+GMLPKNVSEAE+ S
Sbjct: 65 LCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQS 124
Query: 478 LFSKYGTIKDLQILRGAQQTSKGCAFLKYET 570
LFSKYGTIKDLQILRGAQQTSKGCAFLKYET
Sbjct: 125 LFSKYGTIKDLQILRGAQQTSKGCAFLKYET 155
>TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 430
Score = 231 bits (587), Expect = 3e-061
Identities = 110/147 (74%), Positives = 131/147 (89%)
Frame = +1
Query: 130 EKQNNGEESVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFVQCPS 309
E+ EE VK+FVGQ+P+HM+E QLLTLF+EF+ V+EVNIIK+K TRA RGCCF+ CP+
Sbjct: 3 EETMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPT 62
Query: 310 REEADKLVNTCHNKKTLPGAASLLQVKYADGELERLEHKLFIGMLPKNVSEAELLSLFSK 489
RE+ADK++N+ HNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE E+ SLFS+
Sbjct: 63 REDADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSE 122
Query: 490 YGTIKDLQILRGAQQTSKGCAFLKYET 570
YGTIKDLQILRG+ QTSKGC FLKYE+
Sbjct: 123 YGTIKDLQILRGSLQTSKGCLFLKYES 149
>TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 439
Score = 146 bits (368), Expect = 9e-036
Identities = 68/97 (70%), Positives = 85/97 (87%)
Frame = +1
Query: 130 EKQNNGEESVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFVQCPS 309
E+ EE VK+FVGQ+P+HM+E QLLTLF+EF+ V+EVNIIK+K TRA RGCCF+ CP+
Sbjct: 3 EETMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPT 62
Query: 310 REEADKLVNTCHNKKTLPGAASLLQVKYADGELERLE 420
RE+ADK++N+ HNKKTLPGA+S LQVKYADGELERL+
Sbjct: 63 REDADKVINSFHNKKTLPGASSPLQVKYADGELERLD 99
Score = 90 bits (221), Expect = 1e-018
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +1
Query: 418 EHKLFIGMLPKNVSEAELLSLFSKYGTIKDLQILRGAQQTSKGCAFLKYET 570
EHKLF+GMLPKNVSE E+ SLFS+YGTIKDLQILRG+ QTSKGC FLKYE+
Sbjct: 108 EHKLFVGMLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYES 158
>TAIR9_protein||AT4G16280.2 | Symbols: FCA | FCA; RNA binding |
chr4:9207164-9214412 REVERSE
Length = 748
Score = 125 bits (313), Expect = 2e-029
Identities = 59/140 (42%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Frame = +1
Query: 154 SVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFVQCPSREEADKLV 333
+VK+FVG +PR +E ++ F++ +V EV +IKDK T +GCCFV+ + ++AD+ +
Sbjct: 119 TVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAI 178
Query: 334 NTCHNKKTLPGAASLLQVKYADGELER---LEHKLFIGMLPKNVSEAELLSLFSKYGTIK 504
HN+ TLPG +QV+YADGE ER LE KLF+G L K +E E+ +F ++G ++
Sbjct: 179 RALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVE 238
Query: 505 DLQILRGAQQTSKGCAFLKY 564
D+ ++R + S+GC F+KY
Sbjct: 239 DVYLMRDEYRQSRGCGFVKY 258
>TAIR9_protein||AT4G16280.3 | Symbols: FCA | FCA; RNA binding |
chr4:9208564-9214412 REVERSE
Length = 534
Score = 125 bits (313), Expect = 2e-029
Identities = 59/140 (42%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Frame = +1
Query: 154 SVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFVQCPSREEADKLV 333
+VK+FVG +PR +E ++ F++ +V EV +IKDK T +GCCFV+ + ++AD+ +
Sbjct: 119 TVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAI 178
Query: 334 NTCHNKKTLPGAASLLQVKYADGELER---LEHKLFIGMLPKNVSEAELLSLFSKYGTIK 504
HN+ TLPG +QV+YADGE ER LE KLF+G L K +E E+ +F ++G ++
Sbjct: 179 RALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVE 238
Query: 505 DLQILRGAQQTSKGCAFLKY 564
D+ ++R + S+GC F+KY
Sbjct: 239 DVYLMRDEYRQSRGCGFVKY 258
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 47 bits (109), Expect = 9e-006
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 133 KQNNGEESVKVFVGQIPRHMSESQLLTLFQEFADVDEVNIIKDKITRASRGCCFVQCPSR 312
K+ + +K+FVG +P ++ +QL LF+ +V+ V +I DKIT SRG FV S
Sbjct: 83 KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142
Query: 313 EEAD 324
E +
Sbjct: 143 SEVE 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,344,743,188
Number of Sequences: 33410
Number of Extensions: 30344743188
Number of Successful Extensions: 1027522861
Number of sequences better than 0.0: 0
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