Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN68780


BLASTX 7.6.2

Query= UN68780 /QuerySize=711
        (710 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297819570|ref|XP_002877668.1| rab GTPase activator [Arabidops...    154   1e-035
gi|12324453|gb|AAG52193.1|AC012329_20 putative GTPase activator ...    150   3e-034
gi|145339281|ref|NP_190504.2| RabGAP/TBC domain-containing prote...    150   3e-034
gi|297812621|ref|XP_002874194.1| RabGAP/TBC domain-containing pr...    132   5e-029
gi|225455272|ref|XP_002273689.1| PREDICTED: hypothetical protein...    129   6e-028
gi|225455274|ref|XP_002273720.1| PREDICTED: hypothetical protein...    129   6e-028
gi|302143956|emb|CBI23061.3| unnamed protein product [Vitis vini...    129   6e-028
gi|15238518|ref|NP_197827.1| RabGAP/TBC domain-containing protei...    124   1e-026
gi|51971575|dbj|BAD44452.1| GTPase activator like protein of Rab...    124   1e-026
gi|225426598|ref|XP_002280223.1| PREDICTED: hypothetical protein...    119   6e-025
gi|297742433|emb|CBI34582.3| unnamed protein product [Vitis vini...    119   6e-025
gi|297796189|ref|XP_002865979.1| hypothetical protein ARALYDRAFT...    117   2e-024
gi|15238777|ref|NP_200169.1| RabGAP/TBC domain-containing protei...    116   3e-024
gi|255554357|ref|XP_002518218.1| conserved hypothetical protein ...    116   3e-024
gi|238481558|ref|NP_001154777.1| RabGAP/TBC domain-containing pr...    116   3e-024
gi|9759196|dbj|BAB09733.1| GTPase activator protein of Rab-like ...    116   4e-024
gi|219363723|ref|NP_001136455.1| hypothetical protein LOC1002165...    112   6e-023
gi|242045370|ref|XP_002460556.1| hypothetical protein SORBIDRAFT...     97   3e-018
gi|218201562|gb|EEC83989.1| hypothetical protein OsI_30142 [Oryz...     94   2e-017
gi|242081963|ref|XP_002445750.1| hypothetical protein SORBIDRAFT...     91   1e-016

>gi|297819570|ref|XP_002877668.1| rab GTPase activator [Arabidopsis lyrata
        subsp. lyrata]

          Length = 538

 Score =  154 bits (388), Expect = 1e-035
 Identities = 74/88 (84%), Positives = 80/88 (90%)
 Frame = +3

Query: 357 SSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGRLR 536
           SSSSSWI +RSALFVVASSSP+S SSDR RLKSPWS ++RKRPLR +QWKRFFT DGRLR
Sbjct:  25 SSSSSWIQIRSALFVVASSSPASCSSDRPRLKSPWSRRRRKRPLRPQQWKRFFTPDGRLR 84

Query: 537 NGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           NGGVDLL+KVR RGIEPSIR EVWPFLL
Sbjct:  85 NGGVDLLKKVRSRGIEPSIRLEVWPFLL 112

>gi|12324453|gb|AAG52193.1|AC012329_20 putative GTPase activator protein of
        Rab-like small GTPases; 20638-18455 [Arabidopsis thaliana]

          Length = 554

 Score =  150 bits (377), Expect = 3e-034
 Identities = 75/90 (83%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +3

Query: 351 SFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SSSSSWI +RSALFVVASSSP +S SDR RLKSPWS +KRKRPLR +QWKRFFT DGR
Sbjct:  25 SSSSSSSWIQIRSALFVVASSSP-ASCSDRPRLKSPWSRRKRKRPLRPQQWKRFFTPDGR 83

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           LRNGGVDLL+KVR RGIEPSIR EVWPFLL
Sbjct:  84 LRNGGVDLLKKVRSRGIEPSIRLEVWPFLL 113

>gi|145339281|ref|NP_190504.2| RabGAP/TBC domain-containing protein [Arabidopsis
        thaliana]

          Length = 539

 Score =  150 bits (377), Expect = 3e-034
 Identities = 75/90 (83%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +3

Query: 351 SFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SSSSSWI +RSALFVVASSSP +S SDR RLKSPWS +KRKRPLR +QWKRFFT DGR
Sbjct:  25 SSSSSSSWIQIRSALFVVASSSP-ASCSDRPRLKSPWSRRKRKRPLRPQQWKRFFTPDGR 83

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           LRNGGVDLL+KVR RGIEPSIR EVWPFLL
Sbjct:  84 LRNGGVDLLKKVRSRGIEPSIRLEVWPFLL 113

>gi|297812621|ref|XP_002874194.1| RabGAP/TBC domain-containing protein
        [Arabidopsis lyrata subsp. lyrata]

          Length = 528

 Score =  132 bits (331), Expect = 5e-029
 Identities = 64/89 (71%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
 Frame = +3

Query: 357 SSSSSWIHLRSALFVVASSSPSS-SSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGRL 533
           S SS W HLRSA  +V SSSP+S SSSD  RLKSPWS +KRK+PL  ++W+RFFT +GRL
Sbjct:  18 SPSSPWTHLRSAFVIVTSSSPASCSSSDPHRLKSPWSRRKRKKPLTLRRWRRFFTPEGRL 77

Query: 534 RNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           RNGGVDLL+KVR RGI+PSIR EVWPFLL
Sbjct:  78 RNGGVDLLKKVRSRGIDPSIRSEVWPFLL 106

>gi|225455272|ref|XP_002273689.1| PREDICTED: hypothetical protein isoform 1
        [Vitis vinifera]

          Length = 546

 Score =  129 bits (322), Expect = 6e-028
 Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPS-SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSD 524
           SS SSSSSWIHLRS LFVVASSSP+ S S DR RLKSPWS KK+K  L  +QW+   T D
Sbjct:  21 SSSSSSSSWIHLRSVLFVVASSSPAYSCSPDRGRLKSPWSRKKKKHALSPRQWRNMLTPD 80

Query: 525 GRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLLECIVLIVPK-LRELL*DMEKKGVRETTQ 701
           G+LR+GGV L++KVR  G++PSIR EVWPFLL    L   K  R+++    +K   +  +
Sbjct:  81 GKLRDGGVKLVKKVRSGGVDPSIRAEVWPFLLGVYDLNSSKEERDIVKTQNRKEYEKLRR 140

Query: 702 EC 707
           EC
Sbjct: 141 EC 142

>gi|225455274|ref|XP_002273720.1| PREDICTED: hypothetical protein isoform 2
        [Vitis vinifera]

          Length = 549

 Score =  129 bits (322), Expect = 6e-028
 Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPS-SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSD 524
           SS SSSSSWIHLRS LFVVASSSP+ S S DR RLKSPWS KK+K  L  +QW+   T D
Sbjct:  21 SSSSSSSSWIHLRSVLFVVASSSPAYSCSPDRGRLKSPWSRKKKKHALSPRQWRNMLTPD 80

Query: 525 GRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLLECIVLIVPK-LRELL*DMEKKGVRETTQ 701
           G+LR+GGV L++KVR  G++PSIR EVWPFLL    L   K  R+++    +K   +  +
Sbjct:  81 GKLRDGGVKLVKKVRSGGVDPSIRAEVWPFLLGVYDLNSSKEERDIVKTQNRKEYEKLRR 140

Query: 702 EC 707
           EC
Sbjct: 141 EC 142

>gi|302143956|emb|CBI23061.3| unnamed protein product [Vitis vinifera]

          Length = 405

 Score =  129 bits (322), Expect = 6e-028
 Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPS-SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSD 524
           SS SSSSSWIHLRS LFVVASSSP+ S S DR RLKSPWS KK+K  L  +QW+   T D
Sbjct:  21 SSSSSSSSWIHLRSVLFVVASSSPAYSCSPDRGRLKSPWSRKKKKHALSPRQWRNMLTPD 80

Query: 525 GRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLLECIVLIVPK-LRELL*DMEKKGVRETTQ 701
           G+LR+GGV L++KVR  G++PSIR EVWPFLL    L   K  R+++    +K   +  +
Sbjct:  81 GKLRDGGVKLVKKVRSGGVDPSIRAEVWPFLLGVYDLNSSKEERDIVKTQNRKEYEKLRR 140

Query: 702 EC 707
           EC
Sbjct: 141 EC 142

>gi|15238518|ref|NP_197827.1| RabGAP/TBC domain-containing protein [Arabidopsis
        thaliana]

          Length = 528

 Score =  124 bits (311), Expect = 1e-026
 Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = +3

Query: 357 SSSSSWIHLRSALFVVASSSPS--SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SS W HLRSA  +V SSSP+  SSSSD  RLKSPWS +K K+PL  ++W+R FT +GR
Sbjct:  18 SPSSPWTHLRSAFVLVTSSSPASCSSSSDPHRLKSPWSRRKGKKPLTLRRWRRCFTPEGR 77

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +RNGGVDLL+KVR RGI+PSIR EVWPFLL
Sbjct:  78 IRNGGVDLLKKVRTRGIDPSIRSEVWPFLL 107

>gi|51971575|dbj|BAD44452.1| GTPase activator like protein of Rab-like small
        GTPases [Arabidopsis thaliana]

          Length = 528

 Score =  124 bits (311), Expect = 1e-026
 Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = +3

Query: 357 SSSSSWIHLRSALFVVASSSPS--SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SS W HLRSA  +V SSSP+  SSSSD  RLKSPWS +K K+PL  ++W+R FT +GR
Sbjct:  18 SPSSPWTHLRSAFVLVTSSSPASCSSSSDPHRLKSPWSRRKGKKPLTLRRWRRCFTPEGR 77

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +RNGGVDLL+KVR RGI+PSIR EVWPFLL
Sbjct:  78 IRNGGVDLLKKVRTRGIDPSIRSEVWPFLL 107

>gi|225426598|ref|XP_002280223.1| PREDICTED: hypothetical protein isoform 1
        [Vitis vinifera]

          Length = 554

 Score =  119 bits (296), Expect = 6e-025
 Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = +3

Query: 351 SFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SSSSSWIHLR+ L VVASSSP   S+DR  LKSPWS ++RK  L AKQWK  FT DG+
Sbjct:  30 SSSSSSSWIHLRTVLLVVASSSP--VSTDRGTLKSPWSRRRRKHALLAKQWKSLFTPDGK 87

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
             +GGV  L+KVR  G++PSIR EVWPFLL
Sbjct:  88 FTDGGVKFLKKVRSGGVDPSIRVEVWPFLL 117

>gi|297742433|emb|CBI34582.3| unnamed protein product [Vitis vinifera]

          Length = 398

 Score =  119 bits (296), Expect = 6e-025
 Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = +3

Query: 351 SFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
           S SSSSSWIHLR+ L VVASSSP   S+DR  LKSPWS ++RK  L AKQWK  FT DG+
Sbjct:  30 SSSSSSSWIHLRTVLLVVASSSP--VSTDRGTLKSPWSRRRRKHALLAKQWKSLFTPDGK 87

Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
             +GGV  L+KVR  G++PSIR EVWPFLL
Sbjct:  88 FTDGGVKFLKKVRSGGVDPSIRVEVWPFLL 117

>gi|297796189|ref|XP_002865979.1| hypothetical protein ARALYDRAFT_495433
        [Arabidopsis lyrata subsp. lyrata]

          Length = 550

 Score =  117 bits (291), Expect = 2e-024
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = +3

Query: 342 NISSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
           N SS +SSSSWIHLRS LFV   SSPSS +S   R KSPWS +KRK  L   QW+  FT 
Sbjct:  51 NSSSSNSSSSWIHLRSVLFVANPSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTP 110

Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +G+LR+GGV  L+KVR RG++PSIR EVW FLL
Sbjct: 111 EGKLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 143

>gi|15238777|ref|NP_200169.1| RabGAP/TBC domain-containing protein [Arabidopsis
        thaliana]

          Length = 550

 Score =  116 bits (290), Expect = 3e-024
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = +3

Query: 342 NISSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
           N +S SSSSSWIHLRS LFV   SSPSS +S   R KSPWS +KRK  L   QW+  FT 
Sbjct:  48 NSNSSSSSSSWIHLRSVLFVANLSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTP 107

Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +G+LR+GGV  L+KVR RG++PSIR EVW FLL
Sbjct: 108 EGKLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 140

>gi|255554357|ref|XP_002518218.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 547

 Score =  116 bits (290), Expect = 3e-024
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPSS-SSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSD 524
           S+ S SSSW+HLRS L +V SSSP+S S S R  LKSPWSH+KRK  L  +QW+  FT +
Sbjct:  21 SASSGSSSWVHLRSVLLIVNSSSPASCSDSHRGHLKSPWSHRKRKHVLTPRQWRSLFTPE 80

Query: 525 GRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           G+LR+ GV  L+KVR  G++PSIR EVWPFLL
Sbjct:  81 GKLRDRGVKFLKKVRSGGVDPSIRAEVWPFLL 112

>gi|238481558|ref|NP_001154777.1| RabGAP/TBC domain-containing protein
        [Arabidopsis thaliana]

          Length = 577

 Score =  116 bits (290), Expect = 3e-024
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = +3

Query: 342 NISSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
           N +S SSSSSWIHLRS LFV   SSPSS +S   R KSPWS +KRK  L   QW+  FT 
Sbjct:  75 NSNSSSSSSSWIHLRSVLFVANLSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTP 134

Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +G+LR+GGV  L+KVR RG++PSIR EVW FLL
Sbjct: 135 EGKLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 167

>gi|9759196|dbj|BAB09733.1| GTPase activator protein of Rab-like small
        GTPases-like protein [Arabidopsis thaliana]

          Length = 524

 Score =  116 bits (289), Expect = 4e-024
 Identities = 58/91 (63%), Positives = 67/91 (73%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDG 527
           SS SSSSSWIHLRS LFV   SSPSS +S   R KSPWS +KRK  L   QW+  FT +G
Sbjct:  24 SSSSSSSSWIHLRSVLFVANLSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTPEG 83

Query: 528 RLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +LR+GGV  L+KVR RG++PSIR EVW FLL
Sbjct:  84 KLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 114

>gi|219363723|ref|NP_001136455.1| hypothetical protein LOC100216563 [Zea mays]

          Length = 547

 Score =  112 bits (279), Expect = 6e-023
 Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 3/94 (3%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPSSSS---SDRARLKSPWSHKKRKRPLRAKQWKRFFT 518
           +S   SSSWIH+RS L   ASSS SSSS   SDR  +KSPWS +KRKR L  +QW+  F+
Sbjct:  22 ASSPPSSSWIHIRSLLVAAASSSSSSSSSPHSDRGGIKSPWSRRKRKRALSREQWESLFS 81

Query: 519 SDGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           ++G+LR+GG   L+KVR  GIEPSIR EVWPFLL
Sbjct:  82 ANGKLRDGGKKFLKKVRSGGIEPSIRSEVWPFLL 115

>gi|242045370|ref|XP_002460556.1| hypothetical protein SORBIDRAFT_02g030630
        [Sorghum bicolor]

          Length = 574

 Score =  97 bits (239), Expect = 3e-018
 Identities = 50/93 (53%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
 Frame = +3

Query: 348 SSFSSSSSWIHLRSALFVVASSSPSSSS--SDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
           +S ++ S+   + +A  V +SSSP+SSS  SDR  +KSPWS +KRKR L  +QW+  F++
Sbjct:  51 ASAAAGSAVAVVSAAAAVSSSSSPASSSPHSDRGGIKSPWSRRKRKRALLREQWESLFSA 110

Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           +G+LR+GG   L+KVR  GIEPSIR EVWPFLL
Sbjct: 111 NGKLRDGGKKFLKKVRSGGIEPSIRAEVWPFLL 143

>gi|218201562|gb|EEC83989.1| hypothetical protein OsI_30142 [Oryza sativa Indica
        Group]

          Length = 563

 Score =  94 bits (231), Expect = 2e-017
 Identities = 54/105 (51%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
 Frame = +3

Query: 327 SFLAVNISSFSSSSSWI-----HLRSALFVVASSSPSSSS--SDRARLKSPWSHKKRKRP 485
           S L  + SS SSSSS          +A    AS SP+S S  SDR   KSPWS +KRKRP
Sbjct:  33 SLLVASSSSSSSSSSLAASGNSASPAAAAASASFSPASYSPHSDRGGTKSPWSRRKRKRP 92

Query: 486 LRAKQWKRFFTSDGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           L  + W   F+SDG+LR+GG   L+KVR  G+EP IR +VWPFLL
Sbjct:  93 LSCRHWNHLFSSDGKLRDGGRKFLKKVRGGGVEPEIRAKVWPFLL 137

>gi|242081963|ref|XP_002445750.1| hypothetical protein SORBIDRAFT_07g025070
        [Sorghum bicolor]

          Length = 576

 Score =  91 bits (225), Expect = 1e-016
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
 Frame = +3

Query: 342 NISSFSSSSSWIHLRSALFVVASSS-----PSSSSSDRARLKSPWSHKKRKRPLRAKQWK 506
           ++S+ ++S++     +   VVA+SS     PSS + DR  +KSPWS +KRKR L  + W 
Sbjct:  49 SLSTSANSAAEASDSAPASVVAASSSPSLAPSSPNMDRGGIKSPWSRRKRKRALTCQHWN 108

Query: 507 RFFTSDGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
           R F+++G+LR+GG   L+KVR  GIEP IR EVWPFLL
Sbjct: 109 RLFSANGKLRDGGRKFLKKVRSGGIEPGIRAEVWPFLL 146

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,046,832,148
Number of Sequences: 15229318
Number of Extensions: 469046832148
Number of Successful Extensions: 163530061
Number of sequences better than 0.0: 0