BLASTX 7.6.2
Query= UN68780 /QuerySize=711
(710 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49350.1 | Symbols: | RAB GTPase activator | ... 150 1e-036
TAIR9_protein||AT5G24390.1 | Symbols: | RabGAP/TBC domain-conta... 124 5e-029
TAIR9_protein||AT5G53570.1 | Symbols: | RabGAP/TBC domain-conta... 116 1e-026
TAIR9_protein||AT5G53570.2 | Symbols: | RabGAP/TBC domain-conta... 116 1e-026
TAIR9_protein||AT5G41940.1 | Symbols: | RabGAP/TBC domain-conta... 84 6e-017
TAIR9_protein||AT4G27100.1 | Symbols: | RAB GTPase activator | ... 48 6e-006
TAIR9_protein||AT4G27100.2 | Symbols: | RAB GTPase activator | ... 48 6e-006
>TAIR9_protein||AT3G49350.1 | Symbols: | RAB GTPase activator |
chr3:18297663-18299846 REVERSE
Length = 540
Score = 150 bits (377), Expect = 1e-036
Identities = 75/90 (83%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Frame = +3
Query: 351 SFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
S SSSSSWI +RSALFVVASSSP +S SDR RLKSPWS +KRKRPLR +QWKRFFT DGR
Sbjct: 25 SSSSSSSWIQIRSALFVVASSSP-ASCSDRPRLKSPWSRRKRKRPLRPQQWKRFFTPDGR 83
Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
LRNGGVDLL+KVR RGIEPSIR EVWPFLL
Sbjct: 84 LRNGGVDLLKKVRSRGIEPSIRLEVWPFLL 113
Score = 49 bits (115), Expect = 3e-006
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Frame = +1
Query: 283 MKALRRIQTTSSSSNPSSPLTSP------RSLLHLLGSIYVLLSSS 402
MKALRRIQTTSSSSNPSSPL+SP S + + +++V+ SSS
Sbjct: 1 MKALRRIQTTSSSSNPSSPLSSPPSSSSSSSWIQIRSALFVVASSS 46
>TAIR9_protein||AT5G24390.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:8327004-8329238 REVERSE
Length = 529
Score = 124 bits (311), Expect = 5e-029
Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +3
Query: 357 SSSSSWIHLRSALFVVASSSPS--SSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGR 530
S SS W HLRSA +V SSSP+ SSSSD RLKSPWS +K K+PL ++W+R FT +GR
Sbjct: 18 SPSSPWTHLRSAFVLVTSSSPASCSSSSDPHRLKSPWSRRKGKKPLTLRRWRRCFTPEGR 77
Query: 531 LRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
+RNGGVDLL+KVR RGI+PSIR EVWPFLL
Sbjct: 78 IRNGGVDLLKKVRTRGIDPSIRSEVWPFLL 107
>TAIR9_protein||AT5G53570.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:21760924-21763082 REVERSE
Length = 551
Score = 116 bits (290), Expect = 1e-026
Identities = 58/93 (62%), Positives = 68/93 (73%)
Frame = +3
Query: 342 NISSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
N +S SSSSSWIHLRS LFV SSPSS +S R KSPWS +KRK L QW+ FT
Sbjct: 48 NSNSSSSSSSWIHLRSVLFVANLSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTP 107
Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
+G+LR+GGV L+KVR RG++PSIR EVW FLL
Sbjct: 108 EGKLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 140
>TAIR9_protein||AT5G53570.2 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:21760924-21763280 REVERSE
Length = 578
Score = 116 bits (290), Expect = 1e-026
Identities = 58/93 (62%), Positives = 68/93 (73%)
Frame = +3
Query: 342 NISSFSSSSSWIHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTS 521
N +S SSSSSWIHLRS LFV SSPSS +S R KSPWS +KRK L QW+ FT
Sbjct: 75 NSNSSSSSSSWIHLRSVLFVANLSSPSSVTSSDRRRKSPWSRRKRKWALTPHQWRSLFTP 134
Query: 522 DGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLL 620
+G+LR+GGV L+KVR RG++PSIR EVW FLL
Sbjct: 135 EGKLRDGGVGFLKKVRSRGVDPSIRAEVWLFLL 167
>TAIR9_protein||AT5G41940.1 | Symbols: | RabGAP/TBC domain-containing protein |
chr5:16782039-16785451 FORWARD
Length = 550
Score = 84 bits (207), Expect = 6e-017
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +3
Query: 375 IHLRSALFVVASSSPSSSSSDRARLKSPWSHKKRKRPLRAKQWKRFFTSDGRLRNGGVDL 554
+ L A+ V+A + + S R + SPWS ++RKR L+ KQW FFT +GRL +GGV
Sbjct: 52 VGLAVAVTVMAVAVAFTVYSRRGSIGSPWSLRRRKRVLQPKQWNAFFTEEGRLSDGGVKF 111
Query: 555 LRKVRRRGIEPSIRFEVWPFLL 620
L+KVR G+ PSIR EVWPFLL
Sbjct: 112 LKKVRSGGVHPSIRPEVWPFLL 133
>TAIR9_protein||AT4G27100.1 | Symbols: | RAB GTPase activator |
chr4:13595845-13598534 FORWARD
Length = 437
Score = 48 bits (112), Expect = 6e-006
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 471 KRKRPLRAKQWKRFFTSDGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLLEC 626
K + L ++W+ F +G L G LR++RR GI PSIR EVW FLL C
Sbjct: 30 KPGKTLSVRKWQAVFVQEGSLHIG--KTLRRIRRGGIHPSIRGEVWEFLLGC 79
>TAIR9_protein||AT4G27100.2 | Symbols: | RAB GTPase activator |
chr4:13595845-13598620 FORWARD
Length = 434
Score = 48 bits (112), Expect = 6e-006
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 471 KRKRPLRAKQWKRFFTSDGRLRNGGVDLLRKVRRRGIEPSIRFEVWPFLLEC 626
K + L ++W+ F +G L G LR++RR GI PSIR EVW FLL C
Sbjct: 30 KPGKTLSVRKWQAVFVQEGSLHIG--KTLRRIRRGGIHPSIRGEVWEFLLGC 79
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,470,012,363
Number of Sequences: 33410
Number of Extensions: 30470012363
Number of Successful Extensions: 1027624851
Number of sequences better than 0.0: 0
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