BLASTX 7.6.2
Query= UN68787 /QuerySize=793
(792 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7ZUG0|RUXE_DANRE Small nuclear ribonucleoprotein E OS=Danio ... 122 2e-027
sp|Q9VLV5|RUXE_DROME Probable small nuclear ribonucleoprotein E ... 121 9e-027
sp|A4FUI2|RUXE_BOVIN Small nuclear ribonucleoprotein E OS=Bos ta... 120 1e-026
sp|P62303|RUXE_CHICK Small nuclear ribonucleoprotein E OS=Gallus... 120 1e-026
sp|P62304|RUXE_HUMAN Small nuclear ribonucleoprotein E OS=Homo s... 120 1e-026
sp|P62305|RUXE_MOUSE Small nuclear ribonucleoprotein E OS=Mus mu... 120 1e-026
sp|A1XQR9|RUXE_PIG Small nuclear ribonucleoprotein E OS=Sus scro... 120 1e-026
sp|Q5VYJ4|RUEL1_HUMAN Putative small nuclear ribonucleoprotein p... 117 1e-025
sp|A8XDT0|RUXE_CAEBR Probable small nuclear ribonucleoprotein E ... 111 6e-024
sp|Q9XTU6|RUXE_CAEEL Probable small nuclear ribonucleoprotein E ... 109 3e-023
sp|Q9USZ3|RUXE_SCHPO Small nuclear ribonucleoprotein E OS=Schizo... 101 8e-021
sp|Q12330|RUXE_YEAST Small nuclear ribonucleoprotein E OS=Saccha... 90 1e-017
>sp|Q7ZUG0|RUXE_DANRE Small nuclear ribonucleoprotein E OS=Danio rerio GN=snrpe
PE=2 SV=1
Length = 92
Score = 122 bits (306), Expect = 2e-027
Identities = 56/81 (69%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RI +WL+EQ ++RIEG I GFDEYMNLVLD+AEEV +K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
RKPLGRI+LKGDNITL+ +
Sbjct: 69 KNRKPLGRIMLKGDNITLLQS 89
>sp|Q9VLV5|RUXE_DROME Probable small nuclear ribonucleoprotein E OS=Drosophila
melanogaster GN=CG18591 PE=1 SV=1
Length = 94
Score = 121 bits (301), Expect = 9e-027
Identities = 55/81 (67%), Positives = 69/81 (85%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I GFDEYMNLVLD+AEEV +K
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYVKT 67
Query: 560 NTRKPLGRILLKGDNITLMMN 622
R+ LGRI+LKGDNITL+ N
Sbjct: 68 RQRRNLGRIMLKGDNITLIQN 88
>sp|A4FUI2|RUXE_BOVIN Small nuclear ribonucleoprotein E OS=Bos taurus GN=SNRPE
PE=3 SV=1
Length = 92
Score = 120 bits (300), Expect = 1e-026
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|P62303|RUXE_CHICK Small nuclear ribonucleoprotein E OS=Gallus gallus
GN=SNRPE PE=3 SV=1
Length = 92
Score = 120 bits (300), Expect = 1e-026
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|P62304|RUXE_HUMAN Small nuclear ribonucleoprotein E OS=Homo sapiens GN=SNRPE
PE=1 SV=1
Length = 92
Score = 120 bits (300), Expect = 1e-026
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|P62305|RUXE_MOUSE Small nuclear ribonucleoprotein E OS=Mus musculus GN=Snrpe
PE=2 SV=1
Length = 92
Score = 120 bits (300), Expect = 1e-026
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|A1XQR9|RUXE_PIG Small nuclear ribonucleoprotein E OS=Sus scrofa GN=SNRPE
PE=3 SV=1
Length = 92
Score = 120 bits (300), Expect = 1e-026
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|Q5VYJ4|RUEL1_HUMAN Putative small nuclear ribonucleoprotein polypeptide
E-like protein 1 OS=Homo sapiens GN=SNRPEL1 PE=5 SV=1
Length = 92
Score = 117 bits (292), Expect = 1e-025
Identities = 53/81 (65%), Positives = 71/81 (87%)
Frame = +2
Query: 380 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKK 559
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ +++IEG I GFDEYMNLVLD+AEE+ K
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEEIHSKT 68
Query: 560 NTRKPLGRILLKGDNITLMMN 622
+RK LGRI+LKGDNITL+ +
Sbjct: 69 KSRKQLGRIMLKGDNITLLQS 89
>sp|A8XDT0|RUXE_CAEBR Probable small nuclear ribonucleoprotein E
OS=Caenorhabditis briggsae GN=snr-6 PE=3 SV=1
Length = 90
Score = 111 bits (277), Expect = 6e-024
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +2
Query: 368 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 547
M+ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG I GFDE+MN+V DEAEEV
Sbjct: 1 MSQRKIQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 548 SIKKNTRKPLGRILLKGDNITLM 616
++K R +GRILLKGDNITL+
Sbjct: 61 NMKTKGRNKIGRILLKGDNITLI 83
>sp|Q9XTU6|RUXE_CAEEL Probable small nuclear ribonucleoprotein E
OS=Caenorhabditis elegans GN=snr-6 PE=1 SV=1
Length = 90
Score = 109 bits (271), Expect = 3e-023
Identities = 49/83 (59%), Positives = 67/83 (80%)
Frame = +2
Query: 368 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 547
M++ K+ ++M QP+NLIFR+LQ++ R+QIWL+E R+EG I GFDE+MN+V DEAEEV
Sbjct: 1 MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV 60
Query: 548 SIKKNTRKPLGRILLKGDNITLM 616
++K R +GRILLKGDNITL+
Sbjct: 61 NMKTKGRNKIGRILLKGDNITLI 83
>sp|Q9USZ3|RUXE_SCHPO Small nuclear ribonucleoprotein E OS=Schizosaccharomyces
pombe GN=sme1 PE=1 SV=1
Length = 84
Score = 101 bits (250), Expect = 8e-021
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +2
Query: 374 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 553
S +VQ++M PIN IF+ LQ + IWLFEQ D+R++G+I GFDE+MN+VLD+A +V
Sbjct: 2 SGRVQKVMIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDA 61
Query: 554 KKNTRKPLGRILLKGDNITLM 616
K N R+ LGRILLKGDNITL+
Sbjct: 62 KNNKRE-LGRILLKGDNITLI 81
>sp|Q12330|RUXE_YEAST Small nuclear ribonucleoprotein E OS=Saccharomyces
cerevisiae GN=SME1 PE=1 SV=1
Length = 94
Score = 90 bits (222), Expect = 1e-017
Identities = 48/89 (53%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Frame = +2
Query: 374 STKVQ-RIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVS 550
S KV+ + M PIN IF FLQ + + IWLFEQ +RI+G+I GFDE+MN+V+DEA E+
Sbjct: 2 SNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIP 61
Query: 551 I-----KKNTRK--PLGRILLKGDNITLM 616
+ K++ K PLG+ILLKGDNITL+
Sbjct: 62 VNSADGKEDVEKGTPLGKILLKGDNITLI 90
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,958,350,165
Number of Sequences: 518415
Number of Extensions: 230958350165
Number of Successful Extensions: 1437040323
Number of sequences better than 0.0: 0
|
