Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN68830


BLASTX 7.6.2

Query= UN68830 /QuerySize=664
        (663 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box p...     96   1e-020
TAIR9_protein||AT4G24390.2 | Symbols:  | F-box family protein (F...     72   2e-013
TAIR9_protein||AT4G24390.1 | Symbols:  | F-box family protein (F...     72   2e-013

>TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5);
        ubiquitin-protein ligase | chr5:20334420-20336531 REVERSE

          Length = 620

 Score =  96 bits (238), Expect = 1e-020
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +1

Query: 265 KDVARAMPNLVVEVIGSDDDDENREFVETLYMYRSLDGPRKDAPQFVTIL* 417
           KD+ARAMPNLVVEVIGSDDDD+NR++VETLYMYRSLDGPR DAP+FVTIL*
Sbjct: 570 KDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGPRNDAPKFVTIL* 620


 Score =  86 bits (212), Expect = 1e-017
 Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
 Frame = +3

Query:  60 KQKRDMSEDEEDQSPPPSDLRSQQQQQRPPC----SPNKSRNCISSSSQTFPDHVLENVL 227
           + + +MSED++DQ  PP DL S       PC    SPNKSRNCI S+SQTFPDHVLENVL
Sbjct:   3 QDRSEMSEDDDDQQSPPLDLPSTAIAD--PCSSSSSPNKSRNCI-SNSQTFPDHVLENVL 59

Query: 228 ENVLQFLESRTDQGCCTCNAKS 293
           ENVLQFL+SR D+   +   KS
Sbjct:  60 ENVLQFLDSRCDRNAASLVCKS 81

>TAIR9_protein||AT4G24390.2 | Symbols:  | F-box family protein (FBX14) |
        chr4:12613909-12615966 REVERSE

          Length = 624

 Score =  72 bits (176), Expect = 2e-013
 Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 4/55 (7%)
 Frame = +1

Query: 265 KDVARAMPNLVVEVIGSD-DDDENR---EFVETLYMYRSLDGPRKDAPQFVTIL* 417
           + V+ A+PN+VVEV G+D DDDE+    ++VETLY+YRSLDGPRKDAP+FVTIL*
Sbjct: 570 RGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL* 624


 Score =  52 bits (124), Expect = 2e-007
 Identities = 39/83 (46%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
 Frame = +3

Query:  75 MSEDEE---DQSPPPSDLRSQQQQQRPPCSPNKSRNCISSSSQTFPDHVLENVLENVLQF 245
           MSED E   + +PP S   S           NKSRN   SS    PDHVLENVLENVLQF
Sbjct:  10 MSEDVEKYLNLNPPCS---SSSSSSSAATFTNKSRN-FKSSPPPCPDHVLENVLENVLQF 65

Query: 246 LESRTDQGCCTCNAKSSCGSNWF 314
           L SR D+     NA S    +W+
Sbjct:  66 LTSRCDR-----NAVSLVCRSWY 83

>TAIR9_protein||AT4G24390.1 | Symbols:  | F-box family protein (FBX14) |
        chr4:12613909-12615966 REVERSE

          Length = 624

 Score =  72 bits (176), Expect = 2e-013
 Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 4/55 (7%)
 Frame = +1

Query: 265 KDVARAMPNLVVEVIGSD-DDDENR---EFVETLYMYRSLDGPRKDAPQFVTIL* 417
           + V+ A+PN+VVEV G+D DDDE+    ++VETLY+YRSLDGPRKDAP+FVTIL*
Sbjct: 570 RGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL* 624


 Score =  52 bits (124), Expect = 2e-007
 Identities = 39/83 (46%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
 Frame = +3

Query:  75 MSEDEE---DQSPPPSDLRSQQQQQRPPCSPNKSRNCISSSSQTFPDHVLENVLENVLQF 245
           MSED E   + +PP S   S           NKSRN   SS    PDHVLENVLENVLQF
Sbjct:  10 MSEDVEKYLNLNPPCS---SSSSSSSAATFTNKSRN-FKSSPPPCPDHVLENVLENVLQF 65

Query: 246 LESRTDQGCCTCNAKSSCGSNWF 314
           L SR D+     NA S    +W+
Sbjct:  66 LTSRCDR-----NAVSLVCRSWY 83

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,470,012,363
Number of Sequences: 33410
Number of Extensions: 30470012363
Number of Successful Extensions: 1027624851
Number of sequences better than 0.0: 0