BLASTX 7.6.2
Query= UN68933 /QuerySize=657
(656 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G10360.1 | Symbols: | FUNCTIONS IN: molecular... 180 7e-046
TAIR9_protein||AT4G10360.2 | Symbols: | FUNCTIONS IN: molecular... 180 7e-046
TAIR9_protein||AT1G31300.1 | Symbols: | FUNCTIONS IN: molecular... 79 2e-015
TAIR9_protein||AT1G31300.2 | Symbols: | FUNCTIONS IN: molecular... 79 2e-015
TAIR9_protein||AT4G19645.1 | Symbols: | FUNCTIONS IN: molecular... 67 6e-012
TAIR9_protein||AT4G19645.2 | Symbols: | FUNCTIONS IN: molecular... 67 6e-012
>TAIR9_protein||AT4G10360.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins
in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97;
Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). |
chr4:6420679-6422108 FORWARD
Length = 267
Score = 180 bits (456), Expect = 7e-046
Identities = 91/107 (85%), Positives = 97/107 (90%), Gaps = 3/107 (2%)
Frame = +2
Query: 344 MTTNFDD---SSKQLVLLASVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNR 514
MTT+ DD SS+QL+LLAS+CSG LMCKIVYDLT FISPLLFS YGKLD KVRMEWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 515 GFSTFHAVFVSVASIYLLVISDQFDESVHGDSVINSTTRLSESVMGV 655
GFSTFHAVF SVASIY LVISDQFDE+VHGDSVINSTTRLSESVMG+
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGI 107
>TAIR9_protein||AT4G10360.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 453 Blast hits to 451 proteins
in 101 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 97;
Plants - 91; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). |
chr4:6420679-6422108 FORWARD
Length = 267
Score = 180 bits (456), Expect = 7e-046
Identities = 91/107 (85%), Positives = 97/107 (90%), Gaps = 3/107 (2%)
Frame = +2
Query: 344 MTTNFDD---SSKQLVLLASVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNR 514
MTT+ DD SS+QL+LLAS+CSG LMCKIVYDLT FISPLLFS YGKLD KVRMEWNNR
Sbjct: 1 MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60
Query: 515 GFSTFHAVFVSVASIYLLVISDQFDESVHGDSVINSTTRLSESVMGV 655
GFSTFHAVF SVASIY LVISDQFDE+VHGDSVINSTTRLSESVMG+
Sbjct: 61 GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGI 107
>TAIR9_protein||AT1G31300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins
in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98;
Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
chr1:11194308-11195955 FORWARD
Length = 279
Score = 79 bits (194), Expect = 2e-015
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +2
Query: 392 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 571
SV +GI +CK+VYDL FIS Y L R+EWNNRG ST HA+F+S S+Y +
Sbjct: 37 SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96
Query: 572 ISDQFDESVHGDSVINSTTRLSESVMGV 655
SD F + H D V+ ++RLS +G+
Sbjct: 97 WSDLFSDRWHNDLVVFRSSRLSSLGLGI 124
>TAIR9_protein||AT1G31300.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins
in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98;
Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
chr1:11194308-11195955 FORWARD
Length = 279
Score = 79 bits (194), Expect = 2e-015
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +2
Query: 392 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 571
SV +GI +CK+VYDL FIS Y L R+EWNNRG ST HA+F+S S+Y +
Sbjct: 37 SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96
Query: 572 ISDQFDESVHGDSVINSTTRLSESVMGV 655
SD F + H D V+ ++RLS +G+
Sbjct: 97 WSDLFSDRWHNDLVVFRSSRLSSLGLGI 124
>TAIR9_protein||AT4G19645.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins
in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102;
Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
chr4:10689941-10691298 REVERSE
Length = 269
Score = 67 bits (163), Expect = 6e-012
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 392 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 571
SV GI +CK+VYDLT S + +Y L R+EWNNRG ST HA+F+S ++Y
Sbjct: 28 SVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTVHAIFISFMALYFAF 87
Query: 572 ISDQFDE 592
SD F +
Sbjct: 88 FSDLFSD 94
>TAIR9_protein||AT4G19645.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins
in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102;
Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
chr4:10689941-10691298 REVERSE
Length = 269
Score = 67 bits (163), Expect = 6e-012
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 392 SVCSGILMCKIVYDLTGFISPLLFSAYGKLDGKVRMEWNNRGFSTFHAVFVSVASIYLLV 571
SV GI +CK+VYDLT S + +Y L R+EWNNRG ST HA+F+S ++Y
Sbjct: 28 SVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTVHAIFISFMALYFAF 87
Query: 572 ISDQFDE 592
SD F +
Sbjct: 88 FSDLFSD 94
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,510,550,426
Number of Sequences: 33410
Number of Extensions: 30510550426
Number of Successful Extensions: 1027640316
Number of sequences better than 0.0: 0
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