BLASTX 7.6.2
Query= UN68999 /QuerySize=450
(449 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 67 3e-012
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 64 3e-011
TAIR9_protein||AT4G11385.1 | Symbols: | unknown protein | chr4:... 49 1e-006
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 47 4e-006
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 47 4e-006
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 67 bits (163), Expect = 3e-012
Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Frame = -2
Query: 310 SFEDTCSSQITEASNALILALHVSTYVSLSIYIYVCVCLALSCETAYTDRHVKMFVCIS 134
SF+D CSS+ITEASNALILAL V TY+ YIY CV L + RHVKMFVCIS
Sbjct: 342 SFKDACSSEITEASNALILALQVFTYLMSPQYIYRCVVLKTALH-----RHVKMFVCIS 395
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 64 bits (154), Expect = 3e-011
Identities = 29/30 (96%)
Frame = -3
Query: 348 SGVVLGSLPIRVSPSKTPVRPRSPRHPMH* 259
SGVVLGSLPIRVSPSKTPVRPRSPRHPMH*
Sbjct: 330 SGVVLGSLPIRVSPSKTPVRPRSPRHPMH* 359
>TAIR9_protein||AT4G11385.1 | Symbols: | unknown protein | chr4:6927087-6927678
REVERSE
Length = 144
Score = 49 bits (114), Expect = 1e-006
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -1
Query: 449 KKKKKKKKKKKKKKKKKKEKKKKKKGRKQWY 357
K +KKKKKKKKKKKKKKK+KKKKK R Q Y
Sbjct: 103 KIEKKKKKKKKKKKKKKKKKKKKKNLRSQRY 133
Score = 47 bits (110), Expect = 4e-006
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2
Query: 448 KKKKKKKKKKKKKKKKKKKKKKKKKAAS 365
K +KKKKKKKKKKKKKKKKKKKKK S
Sbjct: 103 KIEKKKKKKKKKKKKKKKKKKKKKNLRS 130
Score = 47 bits (110), Expect = 4e-006
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 447 KKKKKKKKKKKKKKKKKRKKKKKKRPQ 367
+KKKKKKKKKKKKKKKK+KKKK R Q
Sbjct: 105 EKKKKKKKKKKKKKKKKKKKKKNLRSQ 131
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 47 bits (110), Expect = 4e-006
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -3
Query: 348 SGVVLGSLPIRVSPSKTPVRPRSPR 274
SG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 325 SGIVLGALPIRVSPSKTPVRPHFPR 349
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 47 bits (110), Expect = 4e-006
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -3
Query: 348 SGVVLGSLPIRVSPSKTPVRPRSPR 274
SG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 325 SGIVLGALPIRVSPSKTPVRPHFPR 349
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,510,550,426
Number of Sequences: 33410
Number of Extensions: 30510550426
Number of Successful Extensions: 1027640316
Number of sequences better than 0.0: 0
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