BLASTX 7.6.2
Query= UN69047 /QuerySize=531
(530 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 104 1e-020
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 101 8e-020
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 101 8e-020
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 97 9e-019
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 97 9e-019
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 97 9e-019
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 97 9e-019
gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleo... 93 2e-017
gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oler... 93 2e-017
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 89 2e-016
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 88 4e-016
gi|255644452|gb|ACU22730.1| unknown [Glycine max] 86 2e-015
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 86 2e-015
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 86 2e-015
gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum] 86 3e-015
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 84 1e-014
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 83 1e-014
gi|224133740|ref|XP_002321649.1| predicted protein [Populus tric... 83 1e-014
gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleo... 82 2e-014
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 81 5e-014
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 104 bits (257), Expect = 1e-020
Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 348
E+G SVAVEE+E + + EGDVSE G +F EP EEAKLFVGNLAYDVDSQA
Sbjct: 89 EEGGEGSVAVEENE-DSFESQDAEGDVSE-----GAEFPEPSEEAKLFVGNLAYDVDSQA 142
Query: 347 LAMLFEQAGTVEIAEVIYNRQ 285
LAMLFEQAGTVEIAEVIYNR+
Sbjct: 143 LAMLFEQAGTVEIAEVIYNRE 163
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 101 bits (249), Expect = 8e-020
Identities = 58/80 (72%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = -1
Query: 509 SVAVEESEP--EEATFSEG---EGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQAL 345
SVAVEE+E E SEG EGDVSEG +F EP EEAKLFVGNLAYDV+SQAL
Sbjct: 92 SVAVEETENSLESQDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQAL 151
Query: 344 AMLFEQAGTVEIAEVIYNRQ 285
AMLFEQAGTVEIAEVIYNR+
Sbjct: 152 AMLFEQAGTVEIAEVIYNRE 171
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 101 bits (249), Expect = 8e-020
Identities = 58/80 (72%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = -1
Query: 509 SVAVEESEP--EEATFSEG---EGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQAL 345
SVAVEE+E E SEG EGDVSEG +F EP EEAKLFVGNLAYDV+SQAL
Sbjct: 82 SVAVEETENSLESQDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQAL 141
Query: 344 AMLFEQAGTVEIAEVIYNRQ 285
AMLFEQAGTVEIAEVIYNR+
Sbjct: 142 AMLFEQAGTVEIAEVIYNRE 161
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 97 bits (240), Expect = 9e-019
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E +G +S V E + E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 112 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 164
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
ALAMLFEQAGTVEIAEVIYNR+
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRE 186
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 97 bits (240), Expect = 9e-019
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E +G +S V E + E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 98 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 150
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
ALAMLFEQAGTVEIAEVIYNR+
Sbjct: 151 ALAMLFEQAGTVEIAEVIYNRE 172
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 97 bits (240), Expect = 9e-019
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E +G +S V E + E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 112 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 164
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
ALAMLFEQAGTVEIAEVIYNR+
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRE 186
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 97 bits (240), Expect = 9e-019
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E +G +S V E + E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 93 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 145
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
ALAMLFEQAGTVEIAEVIYNR+
Sbjct: 146 ALAMLFEQAGTVEIAEVIYNRE 167
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein,
chloroplastic; Short=28RNP
Length = 233
Score = 93 bits (229), Expect = 2e-017
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVS-EGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
++GS+++V ES+PE A E VS EGG GG F EPPEEAKLFVGNL YDVDS+
Sbjct: 10 QEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSE 69
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
LA +F+ AG VEIAEVIYNR+
Sbjct: 70 KLAGIFDAAGVVEIAEVIYNRE 91
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 93 bits (229), Expect = 2e-017
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVS-EGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
++GS+++V ES+PE A E VS EGG GG F EPPEEAKLFVGNL YDVDS+
Sbjct: 3 QEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSE 62
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
LA +F+ AG VEIAEVIYNR+
Sbjct: 63 KLAGIFDAAGVVEIAEVIYNRE 84
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 89 bits (220), Expect = 2e-016
Identities = 44/82 (53%), Positives = 56/82 (68%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E D ++ +EE +E ++ E VS+ G G FQEPPE+AKLFVGNL +DVDS+
Sbjct: 66 EWDQEGTNAVLEEGSDQEPSWGNTEAQVSDFGSDEGEGFQEPPEDAKLFVGNLPFDVDSE 125
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
LA +FE AG VEIAEVIYNR+
Sbjct: 126 KLAQIFEGAGVVEIAEVIYNRE 147
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 88 bits (217), Expect = 4e-016
Identities = 50/78 (64%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = -1
Query: 518 SSSSVAVEESEPEEATFSEGEGDVSEG-GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 342
S +S EE E E+ + V E GG F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSDWPEEEEGEDGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 341 MLFEQAGTVEIAEVIYNR 288
MLFEQAGTVEI+EVIYNR
Sbjct: 131 MLFEQAGTVEISEVIYNR 148
>gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 86 bits (212), Expect = 2e-015
Identities = 48/72 (66%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Frame = -1
Query: 488 EPEEATFSEGEGDVS--EGGGGGGGD--FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAG 321
+ EE + +E E + E G GD F EPPEEAKLFVGNL YDVDSQ LAMLFEQAG
Sbjct: 74 QEEEQSLAETEAGLESWEPNGEDAGDESFVEPPEEAKLFVGNLPYDVDSQKLAMLFEQAG 133
Query: 320 TVEIAEVIYNRQ 285
TVEIAEVIYNR+
Sbjct: 134 TVEIAEVIYNRE 145
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 86 bits (211), Expect = 2e-015
Identities = 49/78 (62%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 518 SSSSVAVEESEPEEATFSEGEGDVSEG-GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 342
S +S EE E E+ + V E G F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 341 MLFEQAGTVEIAEVIYNR 288
MLFEQAGTVEI+EVIYNR
Sbjct: 131 MLFEQAGTVEISEVIYNR 148
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 86 bits (211), Expect = 2e-015
Identities = 47/81 (58%), Positives = 53/81 (65%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 348
E+ + V E E E + E EG G F EPPEEAK+FVGNL YDVDS+
Sbjct: 105 EESNDFEGKVPEWEAEGEDAAATEAIRGEGESGDEEGFVEPPEEAKIFVGNLPYDVDSEK 164
Query: 347 LAMLFEQAGTVEIAEVIYNRQ 285
LAMLFEQAGTVEIAEVIYNR+
Sbjct: 165 LAMLFEQAGTVEIAEVIYNRE 185
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
Length = 291
Score = 86 bits (210), Expect = 3e-015
Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 348
E+G + + + EPE A G D + GGDF EP E+AKLFVGNL YDVDS+
Sbjct: 71 EEGVVETEGLIDWEPEAAENETGGEDYA------GGDFAEPSEDAKLFVGNLPYDVDSEK 124
Query: 347 LAMLFEQAGTVEIAEVIYNRQ 285
LAMLFE AGTVEIAEVIYNR+
Sbjct: 125 LAMLFEPAGTVEIAEVIYNRE 145
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 84 bits (205), Expect = 1e-014
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 494 ESEPEEATFSEGEGDVSE---GGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQA 324
+SE E A +G+G+ E G F+EPPE+AK+FVGNL YDVDSQ LAMLFEQA
Sbjct: 106 DSEGESAAV-DGQGEEEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQA 164
Query: 323 GTVEIAEVIYNRQ 285
GTVEIAEVIYNR+
Sbjct: 165 GTVEIAEVIYNRE 177
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 83 bits (204), Expect = 1e-014
Identities = 46/75 (61%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Frame = -1
Query: 494 ESEPEEATFSEGEGDVSEGG-----GGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFE 330
E E EE T S E GG GG + PPEEAKLFVGNL YDVD QALA LF+
Sbjct: 83 EGEGEEQTESGAEDGEESGGDGFVEGGEEDSYPLPPEEAKLFVGNLPYDVDHQALAELFD 142
Query: 329 QAGTVEIAEVIYNRQ 285
QAGTVE+AEVIYNR+
Sbjct: 143 QAGTVEVAEVIYNRE 157
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 83 bits (204), Expect = 1e-014
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -1
Query: 494 ESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTV 315
E+E E+A SE E EG G F EPPEEAK++VGNL YDV S+ LAMLF+QAGTV
Sbjct: 83 EAEGEDAAASETEAVRGEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTV 142
Query: 314 EIAEVIYNRQ 285
EI+EVIYN +
Sbjct: 143 EISEVIYNTE 152
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein,
chloroplastic; Flags: Precursor
Length = 315
Score = 82 bits (202), Expect = 2e-014
Identities = 45/71 (63%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Frame = -1
Query: 488 EPEEATFSEGEGDVSEG----GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAG 321
E EE F E GD E +FQEPPE+AKLFVGNL YDVDS+ LA LFEQAG
Sbjct: 101 ETEEEGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAG 160
Query: 320 TVEIAEVIYNR 288
VEIAEVIYNR
Sbjct: 161 VVEIAEVIYNR 171
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 81 bits (199), Expect = 5e-014
Identities = 45/79 (56%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -1
Query: 518 SSSSVAVEESEPEEATFSEGE-GDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 342
S +E S EEA EGE G+ E G + EPPEEAKLFVGNL YD+DS+ LA
Sbjct: 93 SEGGEEIEASGSEEAW--EGEVGEDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLA 150
Query: 341 MLFEQAGTVEIAEVIYNRQ 285
LF++AG VEIAEVIYNR+
Sbjct: 151 QLFDEAGVVEIAEVIYNRE 169
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,046,832,148
Number of Sequences: 15229318
Number of Extensions: 469046832148
Number of Successful Extensions: 163530061
Number of sequences better than 0.0: 0
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