BLASTX 7.6.2
Query= UN69047 /QuerySize=531
(530 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 97 5e-020
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 93 1e-018
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 82 1e-015
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 75 2e-013
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 54 7e-007
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 53 9e-007
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 52 2e-006
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 52 2e-006
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 51 4e-006
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 50 7e-006
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 97 bits (240), Expect = 5e-020
Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 530 EEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
E +G +S V E + E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 112 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 164
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
ALAMLFEQAGTVEIAEVIYNR+
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRE 186
Score = 50 bits (119), Expect = 6e-006
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Frame = -2
Query: 286 KTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESVQGVD 167
KTHLKKSPFV+ VA+TSDW+ E+G SVAVEE+ ++
Sbjct: 66 KTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEETENSLE 103
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 93 bits (229), Expect = 1e-018
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = -1
Query: 527 EDGSSSSVAVEESEPEEATFSEGEGDVS-EGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQ 351
++GS+++V ES+PE A E VS EGG GG F EPPEEAKLFVGNL YDVDS+
Sbjct: 10 QEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSE 69
Query: 350 ALAMLFEQAGTVEIAEVIYNRQ 285
LA +F+ AG VEIAEVIYNR+
Sbjct: 70 KLAGIFDAAGVVEIAEVIYNRE 91
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 82 bits (202), Expect = 1e-015
Identities = 45/71 (63%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Frame = -1
Query: 488 EPEEATFSEGEGDVSEG----GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAG 321
E EE F E GD E +FQEPPE+AKLFVGNL YDVDS+ LA LFEQAG
Sbjct: 101 ETEEEGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAG 160
Query: 320 TVEIAEVIYNR 288
VEIAEVIYNR
Sbjct: 161 VVEIAEVIYNR 171
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 75 bits (183), Expect = 2e-013
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -1
Query: 440 GGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRQ 285
G G ++QEP E+AKLFVGNL YD+DS+ LA LF+QAG VEIAEVIYNR+
Sbjct: 82 GEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRE 133
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 54 bits (127), Expect = 7e-007
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -1
Query: 401 EEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNR 288
E+ KLFVGNL + VDS ALA LFE+AG VEI EVIY++
Sbjct: 86 EDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDK 123
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 53 bits (126), Expect = 9e-007
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = -1
Query: 518 SSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPP---EEAKLFVGNLAYDVDSQA 348
SSSS + +P E++FS + E P E+ KLFVGNL + VDS A
Sbjct: 43 SSSSTGLCSIKPFESSFSTRVALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAA 102
Query: 347 LAMLFEQAGTVEIAEVIYNR 288
LA LFE+AG VE+ EVIY++
Sbjct: 103 LAGLFERAGNVEMVEVIYDK 122
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 52 bits (122), Expect = 2e-006
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = -1
Query: 518 SSSSVAVEESEPEEATFSEGE--GDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQAL 345
SSSS + T S+ + DV +G G + P + K+FVGNL + DS AL
Sbjct: 45 SSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSP-DLKIFVGNLPFSADSAAL 103
Query: 344 AMLFEQAGTVEIAEVIYNR 288
A LFE+AG VE+ EVIY++
Sbjct: 104 AELFERAGNVEMVEVIYDK 122
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 52 bits (122), Expect = 2e-006
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -1
Query: 452 DVSEGGGGGGGDFQEPPE------EAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYN 291
+V E GD P E + KLFVGNL+++VDS LA LFE AG VE+ EVIY+
Sbjct: 74 EVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYD 133
Query: 290 R 288
+
Sbjct: 134 K 134
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 51 bits (120), Expect = 4e-006
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Frame = -1
Query: 428 GGGDFQEPPEEA-----KLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNR 288
G D P E++ KLFVGNL ++VDS LA LFE AG VE+ EVIY++
Sbjct: 75 GFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDK 126
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 50 bits (118), Expect = 7e-006
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = -1
Query: 452 DVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNR 288
DV +G G + P + K+FVGNL + DS ALA LFE+AG VE+ EVIY++
Sbjct: 69 DVEDGDEGVEEERNFSP-DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDK 122
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,958,350,165
Number of Sequences: 518415
Number of Extensions: 230958350165
Number of Successful Extensions: 1437040323
Number of sequences better than 0.0: 0
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