Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN69480


BLASTX 7.6.2

Query= UN69480 /QuerySize=423
        (422 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8GX84|C3H1_ARATH Zinc finger CCCH domain-containing protein ...    124   1e-028
sp|Q9FNG6|C3H51_ARATH Zinc finger CCCH domain-containing protein...     99   4e-021
sp|Q6K4V3|C3H15_ORYSJ Zinc finger CCCH domain-containing protein...     48   1e-005

>sp|Q8GX84|C3H1_ARATH Zinc finger CCCH domain-containing protein 1
        OS=Arabidopsis thaliana GN=At1g01350 PE=2 SV=2

          Length = 343

 Score =  124 bits (311), Expect = 1e-028
 Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 5/101 (4%)
 Frame = +3

Query: 120 EPKTSQQEDSQPAAAAVTQESQSQQVCTFFKKPSKAKNIRKRPAADADEEDDDDSKSETS 299
           EPK SQQE+  P  AA  QE+QSQQVCTFFKKP+K+KNIRKR   DADEE D DSKSE+S
Sbjct:   6 EPKPSQQEEPLPQPAA--QETQSQQVCTFFKKPTKSKNIRKR-TIDADEE-DGDSKSESS 61

Query: 300 ILNNLKKVAKPDNNKLFFSSGPSKISPTTAPPEKAVVFHYD 422
           IL NLKKVAKPD +KL+FSSGPSK S TT+   +  VFHYD
Sbjct:  62 ILQNLKKVAKPD-SKLYFSSGPSKSSTTTSGAPERSVFHYD 101

>sp|Q9FNG6|C3H51_ARATH Zinc finger CCCH domain-containing protein 51
        OS=Arabidopsis thaliana GN=At5g06420 PE=2 SV=1

          Length = 378

 Score =  99 bits (246), Expect = 4e-021
 Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 6/84 (7%)
 Frame = +3

Query: 171 TQESQSQQVCTFFKKPSKAKNIRKRPAADADEEDDDDSKSETSILNNLKKVAKPDNNKLF 350
           +   +SQQVCTFFKKP+K+KNIRKR   DADEE D DSKSE+SIL NLKKVAKPD+N L+
Sbjct:  59 SNNQESQQVCTFFKKPTKSKNIRKR-TIDADEE-DGDSKSESSILQNLKKVAKPDSN-LY 115

Query: 351 FSSGPSKISPTTAPPEKAVVFHYD 422
           FSSGPS  + T+  PE+  VFHYD
Sbjct: 116 FSSGPS--TRTSGAPERP-VFHYD 136

>sp|Q6K4V3|C3H15_ORYSJ Zinc finger CCCH domain-containing protein 15 OS=Oryza
        sativa subsp. japonica GN=Os02g0301000 PE=2 SV=1

          Length = 326

 Score =  48 bits (113), Expect = 1e-005
 Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +3

Query: 186 SQQVCTFFKKPSKAKNIRKRPAADADEEDDDDSKSETSILNNLKKVAKPDNNKLFFSSGP 365
           S  VC+F +KP   KNIRKRP A A  +DDD+  S        KK A    +KLFFSS  
Sbjct:  15 SAPVCSFVRKP--PKNIRKRPTAPAGSDDDDEDGSGAIAAARAKK-APSSTSKLFFSSAD 71

Query: 366 SKISP 380
               P
Sbjct:  72 GSSEP 76

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,993,081,892
Number of Sequences: 518415
Number of Extensions: 231993081892
Number of Successful Extensions: 1449023209
Number of sequences better than 0.0: 0