BLASTX 7.6.2
Query= UN69525 /QuerySize=524
(523 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LGE6|LSM4_ORYSJ Probable U6 snRNA-associated Sm-like protei... 58 3e-008
sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protei... 58 3e-008
sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protei... 56 1e-007
sp|Q3ZBK6|LSM4_BOVIN U6 snRNA-associated Sm-like protein LSm4 OS... 52 2e-006
sp|Q9Y4Z0|LSM4_HUMAN U6 snRNA-associated Sm-like protein LSm4 OS... 52 2e-006
sp|Q9QXA5|LSM4_MOUSE U6 snRNA-associated Sm-like protein LSm4 OS... 52 2e-006
sp|Q19952|LSM4_CAEEL Probable U6 snRNA-associated Sm-like protei... 51 3e-006
>sp|Q9LGE6|LSM4_ORYSJ Probable U6 snRNA-associated Sm-like protein LSm4 OS=Oryza
sativa subsp. japonica GN=Os01g0256900 PE=2 SV=1
Length = 147
Score = 58 bits (139), Expect = 3e-008
Identities = 24/24 (100%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHLVNCDTWMNIH
Sbjct: 16 LVELKNGETYNGHLVNCDTWMNIH 39
>sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protein LSm4
OS=Nicotiana tabacum PE=2 SV=1
Length = 146
Score = 58 bits (139), Expect = 3e-008
Identities = 24/24 (100%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHLVNCDTWMNIH
Sbjct: 16 LVELKNGETYNGHLVNCDTWMNIH 39
>sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protein LSm4 OS=Fagus
sylvatica GN=LSM4 PE=2 SV=1
Length = 148
Score = 56 bits (134), Expect = 1e-007
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELK+GETYNGHLVNCDTWMNIH
Sbjct: 16 LVELKSGETYNGHLVNCDTWMNIH 39
>sp|Q3ZBK6|LSM4_BOVIN U6 snRNA-associated Sm-like protein LSm4 OS=Bos taurus
GN=LSM4 PE=2 SV=1
Length = 139
Score = 52 bits (122), Expect = 2e-006
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHLV+CD WMNI+
Sbjct: 16 LVELKNGETYNGHLVSCDNWMNIN 39
>sp|Q9Y4Z0|LSM4_HUMAN U6 snRNA-associated Sm-like protein LSm4 OS=Homo sapiens
GN=LSM4 PE=1 SV=1
Length = 139
Score = 52 bits (122), Expect = 2e-006
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHLV+CD WMNI+
Sbjct: 16 LVELKNGETYNGHLVSCDNWMNIN 39
>sp|Q9QXA5|LSM4_MOUSE U6 snRNA-associated Sm-like protein LSm4 OS=Mus musculus
GN=Lsm4 PE=2 SV=1
Length = 137
Score = 52 bits (122), Expect = 2e-006
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHLV+CD WMNI+
Sbjct: 16 LVELKNGETYNGHLVSCDNWMNIN 39
>sp|Q19952|LSM4_CAEEL Probable U6 snRNA-associated Sm-like protein LSm4
OS=Caenorhabditis elegans GN=lsm-4 PE=3 SV=1
Length = 123
Score = 51 bits (121), Expect = 3e-006
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 451 LVELKNGETYNGHLVNCDTWMNIH 522
LVELKNGETYNGHL CD+WMNIH
Sbjct: 17 LVELKNGETYNGHLKACDSWMNIH 40
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,993,081,892
Number of Sequences: 518415
Number of Extensions: 231993081892
Number of Successful Extensions: 1449023209
Number of sequences better than 0.0: 0
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