BLASTX 7.6.2
Query= UN69825 /QuerySize=641
(640 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36960.1 | Symbols: | RNA recognition motif (... 216 1e-056
TAIR9_protein||AT4G36960.2 | Symbols: | RNA recognition motif (... 216 1e-056
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 68 5e-012
TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (... 68 5e-012
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 68 5e-012
TAIR9_protein||AT3G13224.1 | Symbols: | RNA recognition motif (... 62 3e-010
TAIR9_protein||AT3G13224.2 | Symbols: | RNA recognition motif (... 62 3e-010
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 62 3e-010
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 62 3e-010
TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (... 61 4e-010
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 61 4e-010
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 61 4e-010
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 61 4e-010
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 60 1e-009
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 60 1e-009
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 60 1e-009
>TAIR9_protein||AT4G36960.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:17427349-17429589 FORWARD
Length = 380
Score = 216 bits (548), Expect = 1e-056
Identities = 112/127 (88%), Positives = 113/127 (88%), Gaps = 5/127 (3%)
Frame = -1
Query: 637 YGRAEP-TRGIGNKIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVT 461
YGR EP TRGIGNKIFVGRLPQEASVDDLRDYFGRFG IQDAYIPKDPKRSGHRGFGFVT
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVT 287
Query: 460 FAENGVADRVARRSHEICGQEVAIDSATPLDEAGGPSGAGGGGSTFSSRPEHFGGYAGGG 281
FAENGVADRVARRSHEICGQEVAIDSATPLDEA GPS AG SSRPE+FGGY GG
Sbjct: 288 FAENGVADRVARRSHEICGQEVAIDSATPLDEA-GPS-AGASSMLSSSRPEYFGGY--GG 343
Query: 280 PMRTFGR 260
PMR FGR
Sbjct: 344 PMRAFGR 350
Score = 58 bits (138), Expect = 5e-009
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = -3
Query: 269 FWSMYGGAMSLDDWGYGVPSARPSRSDWRYRPY* 168
F MYGG MSLDDWGYG+P+ARPSR D RYRPY*
Sbjct: 348 FGRMYGG-MSLDDWGYGMPNARPSRPDRRYRPY* 380
>TAIR9_protein||AT4G36960.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:17427349-17429589 FORWARD
Length = 380
Score = 216 bits (548), Expect = 1e-056
Identities = 112/127 (88%), Positives = 113/127 (88%), Gaps = 5/127 (3%)
Frame = -1
Query: 637 YGRAEP-TRGIGNKIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVT 461
YGR EP TRGIGNKIFVGRLPQEASVDDLRDYFGRFG IQDAYIPKDPKRSGHRGFGFVT
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVT 287
Query: 460 FAENGVADRVARRSHEICGQEVAIDSATPLDEAGGPSGAGGGGSTFSSRPEHFGGYAGGG 281
FAENGVADRVARRSHEICGQEVAIDSATPLDEA GPS AG SSRPE+FGGY GG
Sbjct: 288 FAENGVADRVARRSHEICGQEVAIDSATPLDEA-GPS-AGASSMLSSSRPEYFGGY--GG 343
Query: 280 PMRTFGR 260
PMR FGR
Sbjct: 344 PMRAFGR 350
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 68 bits (164), Expect = 5e-012
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + E S D LRDYF FG + +A I KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:16225483-16227423 FORWARD
Length = 424
Score = 68 bits (164), Expect = 5e-012
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
KIFVG L +E + + +FG++G I D+ I KD K RGFGFVT+A++ V D+V +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 421 SHEICGQEVAIDSATP 374
+H I G++V I P
Sbjct: 103 NHIIIGKQVEIKRTIP 118
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 68 bits (164), Expect = 5e-012
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + E S D LRDYF FG + +A I KD RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>TAIR9_protein||AT3G13224.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:4254848-4256014 FORWARD
Length = 232
Score = 62 bits (149), Expect = 3e-010
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
KIF+G L ++ + +FG++G I D+ I +D RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 421 SHEICGQEVAIDSATPLDEAGGPS 350
+H I G++V I P G S
Sbjct: 80 THVINGKQVEIKRTIPKGAGGNQS 103
>TAIR9_protein||AT3G13224.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:4254848-4256621 FORWARD
Length = 359
Score = 62 bits (149), Expect = 3e-010
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
KIF+G L ++ + +FG++G I D+ I +D RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 421 SHEICGQEVAIDSATPLDEAGGPS 350
+H I G++V I P G S
Sbjct: 80 THVINGKQVEIKRTIPKGAGGNQS 103
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 62 bits (148), Expect = 3e-010
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + L++YFG++G + +A I +D RGFGF+ FA+ VA+RV
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 76 KHIIDGRTVEAKKAVPRDD 94
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 62 bits (148), Expect = 3e-010
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + L++YFG++G + +A I +D RGFGF+ FA+ VA+RV
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 72
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 73 KHIIDGRTVEAKKAVPRDD 91
>TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:6067394-6069098 REVERSE
Length = 370
Score = 61 bits (147), Expect = 4e-010
Identities = 29/76 (38%), Positives = 44/76 (57%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+FVG + E + + +YFG+FG + D+ I D RGFGFVTFA++ VA++V
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 421 SHEICGQEVAIDSATP 374
H I ++V + P
Sbjct: 127 DHVIDDRKVDLKRTLP 142
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 61 bits (147), Expect = 4e-010
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -1
Query: 613 GIGNKIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADR 434
G KIFVG LP + ++ ++YF +FG I D + D RGFGF+TF + DR
Sbjct: 107 GRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDR 166
Query: 433 VARRS-HEICGQEVAIDSATP 374
V ++ HE+ G+ V + A P
Sbjct: 167 VLHKTFHELNGKLVEVKRAVP 187
Score = 60 bits (143), Expect = 1e-009
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 61 bits (147), Expect = 4e-010
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -1
Query: 613 GIGNKIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADR 434
G KIFVG LP + ++ ++YF +FG I D + D RGFGF+TF + DR
Sbjct: 107 GRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDR 166
Query: 433 VARRS-HEICGQEVAIDSATP 374
V ++ HE+ G+ V + A P
Sbjct: 167 VLHKTFHELNGKLVEVKRAVP 187
Score = 60 bits (143), Expect = 1e-009
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 61 bits (147), Expect = 4e-010
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -1
Query: 613 GIGNKIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADR 434
G KIFVG LP + ++ ++YF +FG I D + D RGFGF+TF + DR
Sbjct: 107 GRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDR 166
Query: 433 VARRS-HEICGQEVAIDSATP 374
V ++ HE+ G+ V + A P
Sbjct: 167 VLHKTFHELNGKLVEVKRAVP 187
Score = 60 bits (143), Expect = 1e-009
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 60 bits (144), Expect = 1e-009
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + + L++YF FG + +A I KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHNIDGRLVEAKKAVPRDD 85
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 60 bits (144), Expect = 1e-009
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+F+G + + + + L++YF FG + +A I KD RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 421 SHEICGQEVAIDSATPLDE 365
H I G+ V A P D+
Sbjct: 67 KHNIDGRLVEAKKAVPRDD 85
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 60 bits (143), Expect = 1e-009
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = -1
Query: 601 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR 422
K+FVG + E D LR++F +G + A + +D RGFGFV F++ V DRV +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 421 SHEICGQEVAIDSATPLDE--AGGPSG-----AGGGGSTFSSRPEHFGG 296
H I +EV + A +E G +G GG ++ + F G
Sbjct: 67 KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVG 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,822,423,641
Number of Sequences: 33410
Number of Extensions: 30822423641
Number of Successful Extensions: 1043813745
Number of sequences better than 0.0: 0
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