BLASTX 7.6.2
Query= UN69879 /QuerySize=439
(438 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|2252863|gb|AAB62861.1| similar to nucleolin protein [Arabidop... 163 6e-039
gi|18411454|ref|NP_567192.1| RNA recognition motif-containing pr... 163 6e-039
gi|334186262|ref|NP_001190647.1| RNA recognition motif-containin... 163 6e-039
gi|334186264|ref|NP_001190648.1| RNA recognition motif-containin... 163 6e-039
gi|297814257|ref|XP_002875012.1| RNA recognition motif-containin... 162 1e-038
gi|224130652|ref|XP_002320894.1| predicted protein [Populus tric... 112 2e-023
gi|225464938|ref|XP_002275366.1| PREDICTED: hypothetical protein... 107 6e-022
gi|296084906|emb|CBI28315.3| unnamed protein product [Vitis vini... 107 6e-022
gi|225453602|ref|XP_002264834.1| PREDICTED: hypothetical protein... 106 8e-022
gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putat... 106 1e-021
gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recogn... 104 4e-021
gi|224068117|ref|XP_002302667.1| predicted protein [Populus tric... 104 5e-021
gi|224088555|ref|XP_002308472.1| predicted protein [Populus tric... 102 2e-020
gi|255565651|ref|XP_002523815.1| nucleolar phosphoprotein, putat... 96 8e-019
gi|115481176|ref|NP_001064181.1| Os10g0151800 [Oryza sativa Japo... 94 5e-018
gi|224104859|ref|XP_002313595.1| predicted protein [Populus tric... 93 9e-018
gi|326497929|dbj|BAJ94827.1| predicted protein [Hordeum vulgare ... 93 9e-018
gi|326517573|dbj|BAK03705.1| predicted protein [Hordeum vulgare ... 93 9e-018
gi|255578939|ref|XP_002530322.1| nucleolar phosphoprotein, putat... 92 2e-017
gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, R... 91 4e-017
>gi|2252863|gb|AAB62861.1| similar to nucleolin protein [Arabidopsis thaliana]
Length = 521
Score = 163 bits (412), Expect = 6e-039
Identities = 78/93 (83%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 429 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 488
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
RR DRNNGSS GSG +NS +HDG+R GGRRYRP
Sbjct: 489 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRP 520
>gi|18411454|ref|NP_567192.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 495
Score = 163 bits (412), Expect = 6e-039
Identities = 78/93 (83%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 403 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 462
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
RR DRNNGSS GSG +NS +HDG+R GGRRYRP
Sbjct: 463 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRP 494
>gi|334186262|ref|NP_001190647.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 467
Score = 163 bits (412), Expect = 6e-039
Identities = 78/93 (83%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 375 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 434
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
RR DRNNGSS GSG +NS +HDG+R GGRRYRP
Sbjct: 435 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRP 466
>gi|334186264|ref|NP_001190648.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 495
Score = 163 bits (412), Expect = 6e-039
Identities = 78/93 (83%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 403 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 462
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
RR DRNNGSS GSG +NS +HDG+R GGRRYRP
Sbjct: 463 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRP 494
>gi|297814257|ref|XP_002875012.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 494
Score = 162 bits (409), Expect = 1e-038
Identities = 78/93 (83%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+QMA PP RP
Sbjct: 402 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMQMAAAPPARP 461
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
RR DRNNGSS GSG +NS +HDG+R GGRRYRP
Sbjct: 462 RRVDRNNGSSGGSGRDNSHEHDGNR-GGRRYRP 493
>gi|224130652|ref|XP_002320894.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 112 bits (278), Expect = 2e-023
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YG++G G G+A SF QP+IYGRG MP GM MVPM+ PDGR+GYVLQQPG+QM P RP
Sbjct: 393 YGSLGTGFGVASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQM---PQPRP 449
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRG 175
RR DRNNG S G G + DG+RG
Sbjct: 450 RRVDRNNGPS-GPGRAGNSSDDGNRG 474
>gi|225464938|ref|XP_002275366.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 503
Score = 107 bits (265), Expect = 6e-022
Identities = 54/96 (56%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = -1
Query: 435 AYGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR 256
AYGA+G G G AG F+QP+IYGRG P GM M+PML PDGR+GYVLQQPG Q PP +
Sbjct: 409 AYGALGAGYGTAG-FAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQPHTPPSHQ 467
Query: 255 PRRGDRNNGSSRGSGGENS-DDHDGSRGGGRRYRPY 151
G +GS SGG +S H+ G GRRY PY
Sbjct: 468 RSSGRGGSGSGSKSGGSSSRGRHNNDGGHGRRYHPY 503
>gi|296084906|emb|CBI28315.3| unnamed protein product [Vitis vinifera]
Length = 434
Score = 107 bits (265), Expect = 6e-022
Identities = 54/96 (56%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = -1
Query: 435 AYGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR 256
AYGA+G G G AG F+QP+IYGRG P GM M+PML PDGR+GYVLQQPG Q PP +
Sbjct: 340 AYGALGAGYGTAG-FAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQPHTPPSHQ 398
Query: 255 PRRGDRNNGSSRGSGGENS-DDHDGSRGGGRRYRPY 151
G +GS SGG +S H+ G GRRY PY
Sbjct: 399 RSSGRGGSGSGSKSGGSSSRGRHNNDGGHGRRYHPY 434
>gi|225453602|ref|XP_002264834.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 476
Score = 106 bits (264), Expect = 8e-022
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YG++G G G++ F QP+IYGRG MP GM MVPM+ PDGR+GYVLQQPG+QM PP RP
Sbjct: 387 YGSLGPGYGVSAPFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQM---PPPRP 443
Query: 252 RRGDRNNGSS--RGSGGENSDDHD 187
RR +R+NGSS +G GG + D
Sbjct: 444 RRNERSNGSSGQQGRGGSSGSGDD 467
>gi|255578218|ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus
communis]
Length = 557
Score = 106 bits (263), Expect = 1e-021
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
Y ++G G G+A SF QP+IYGRG MP GM MVPM+ PDGR+GYVLQQPG+QM P RP
Sbjct: 366 YSSLGGGFGVASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQM---PQPRP 422
Query: 252 RRGDRNNGSS-RGSGGENSDDHDGS 181
RR +R+NGSS G G+ S DH S
Sbjct: 423 RRVERSNGSSGPGRAGKTSTDHKTS 447
>gi|124359745|gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);
Calcium-binding EF-hand [Medicago truncatula]
Length = 559
Score = 104 bits (258), Expect = 4e-021
Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Frame = -1
Query: 432 YGAMGFGLGI--AGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQ 259
YG++G G G+ A ++ QPMIYGRG MP GMQMVPM+ PDGR+GYVLQQPG+Q+ P
Sbjct: 471 YGSVGAGYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQV---PGP 527
Query: 258 RPRRGDRNNG-SSRGSGGENSDDHDGSR 178
RPRR DR NG RG GG N D + R
Sbjct: 528 RPRRNDRGNGPGGRGGGGGNDDGNRNRR 555
>gi|224068117|ref|XP_002302667.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 104 bits (257), Expect = 5e-021
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
+G++G G G+A F QP+IYGRG MP GM MVPM+ PDGR+GYVLQQPG+QM P PQ P
Sbjct: 307 HGSLGTGFGVAAGFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQM--PQPQ-P 363
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRG 175
RR DR+N S G G S DG+RG
Sbjct: 364 RRVDRSNSPS-GPGRAGSSGDDGNRG 388
>gi|224088555|ref|XP_002308472.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 102 bits (253), Expect = 2e-020
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
Frame = -1
Query: 435 AYGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR 256
+YGA+G G G AG F+QP+IYGRG P GM M+PML PDGR+GYVLQQPG+QM PPPQ
Sbjct: 353 SYGALGAGFGAAG-FAQPVIYGRGPTPAGMSMMPMLLPDGRIGYVLQQPGMQMHSPPPQ- 410
Query: 255 PRRGDRNNGSSRGSGGENSDDHDGSRGGGR 166
G R +G+ SGG +DG RG R
Sbjct: 411 -PWGGRGSGAGSSSGGRR---NDGGRGRSR 436
>gi|255565651|ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus
communis]
Length = 489
Score = 96 bits (238), Expect = 8e-019
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -1
Query: 435 AYGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR 256
A+GA+G G G+ +QP+IYGRG P GM M+PML PDGR+GYVLQQPG+Q PP
Sbjct: 397 AFGALGAGY---GAVAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGVQPHTPPSHH 453
Query: 255 PRRGDRNNGSSRGSGGENSDDHDGSRG-GGRRYRPY 151
++G + SGG + G+ G GRRYRPY
Sbjct: 454 RNNSRNSSGVASRSGGGSGRGRQGNDGSNGRRYRPY 489
>gi|115481176|ref|NP_001064181.1| Os10g0151800 [Oryza sativa Japonica Group]
Length = 472
Score = 94 bits (231), Expect = 5e-018
Identities = 47/77 (61%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGA G G F+QPMIYGRG P GM+MVPM+ PDGR+GYVLQQPG PPP P
Sbjct: 395 YGAYGGG---GPGFNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPG---GIPPPPPP 448
Query: 252 RRGDRNNGSSRGSGGEN 202
RRGDR +G SRG G +
Sbjct: 449 RRGDRRDGGSRGGEGSH 465
>gi|224104859|ref|XP_002313595.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 93 bits (229), Expect = 9e-018
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Frame = -1
Query: 435 AYGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR 256
AYGA+G G AG QP+IYG G P GM M+PML PDG+ GYVLQQPG+Q+ P +
Sbjct: 393 AYGALGAGYVTAGFAQQPLIYGSGPSPAGMAMMPMLLPDGQFGYVLQQPGVQLHSPTSYQ 452
Query: 255 PRRGDRNNGSSRGS---GGENSDDHDGSRGGGRRYRPY 151
R R+ RG+ G N H G G+R+RPY
Sbjct: 453 -RNDSRSGSGGRGNKMGGSSNRGRHSNDSGHGQRFRPY 489
>gi|326497929|dbj|BAJ94827.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 469
Score = 93 bits (229), Expect = 9e-018
Identities = 48/73 (65%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGA G G G F+QPMIYGRG P GM+MVPM+ PDGR+GYVLQQPG M PPPP P
Sbjct: 397 YGAYGGGPG----FNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPG-GMPPPPP--P 449
Query: 252 RRGDRNNGSSRGS 214
RRGDR +G GS
Sbjct: 450 RRGDRRDGGGEGS 462
>gi|326517573|dbj|BAK03705.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 372
Score = 93 bits (229), Expect = 9e-018
Identities = 48/73 (65%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGA G G G F+QPMIYGRG P GM+MVPM+ PDGR+GYVLQQPG M PPPP P
Sbjct: 300 YGAYGGGPG----FNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPG-GMPPPPP--P 352
Query: 252 RRGDRNNGSSRGS 214
RRGDR +G GS
Sbjct: 353 RRGDRRDGGGEGS 365
>gi|255578939|ref|XP_002530322.1| nucleolar phosphoprotein, putative [Ricinus
communis]
Length = 481
Score = 92 bits (227), Expect = 2e-017
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGA+G G G SF+QPMIYGRG P G+ M+PML PDGR+GYV+QQPG+Q PP Q P
Sbjct: 396 YGALGAGYG--ASFAQPMIYGRGPTPAGISMMPMLLPDGRIGYVMQQPGMQPQTPPSQ-P 452
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSR 178
R G R + SGG S++++ R
Sbjct: 453 RAG-RGGSAGSSSGGRRSNENNRGR 476
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain), putative [Oryza sativa Japonica Group]
Length = 465
Score = 91 bits (224), Expect = 4e-017
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGA G G F+QPMIYGRG P GM+MVPM+ PDGR+GYVLQQPG + PPPP
Sbjct: 388 YGAYGGG---GPGFNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPG-GIPPPPPM-- 441
Query: 252 RRGDRNNGSSRGSGGEN 202
RRGDR +G SRG G +
Sbjct: 442 RRGDRRDGGSRGGEGSH 458
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,046,832,148
Number of Sequences: 15229318
Number of Extensions: 469046832148
Number of Successful Extensions: 163530061
Number of sequences better than 0.0: 0
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