BLASTX 7.6.2
Query= UN69879 /QuerySize=439
(438 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G00830.1 | Symbols: | RNA recognition motif (... 166 5e-042
TAIR9_protein||AT4G00830.2 | Symbols: | RNA recognition motif (... 166 5e-042
TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (... 79 1e-015
TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (... 79 1e-015
TAIR9_protein||AT5G28390.1 | Symbols: | RNA recognition motif (... 68 2e-012
>TAIR9_protein||AT4G00830.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:352782-354965 FORWARD
Length = 496
Score = 166 bits (420), Expect = 5e-042
Identities = 79/95 (83%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 403 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 462
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRPY* 148
RR DRNNGSS GSG +NS +HDG+R GGRRYRPY*
Sbjct: 463 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRPY* 496
>TAIR9_protein||AT4G00830.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:352782-354965 FORWARD
Length = 496
Score = 166 bits (420), Expect = 5e-042
Identities = 79/95 (83%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRP 253
YGAMG GLGIAGSFSQPMIYGRG+MPTGMQMVPML PDGRVGYVLQQPG+ MA PPQRP
Sbjct: 403 YGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRP 462
Query: 252 RRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRPY* 148
RR DRNNGSS GSG +NS +HDG+R GGRRYRPY*
Sbjct: 463 RRNDRNNGSSGGSGRDNSHEHDGNR-GGRRYRPY* 496
>TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 79 bits (192), Expect = 1e-015
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR- 256
+GA+G G G A ++SQP+++ G GM M+P++ PDGR+GYVLQQPGL P PP R
Sbjct: 382 FGALG-GFG-ASAYSQPLMHAGGHAAGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRH 439
Query: 255 --PRRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
P RG +GSS SG + S D+ R RY P
Sbjct: 440 SPPYRG--GSGSSSSSGSKRSSDNGRGRS---RYNP 470
>TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 79 bits (192), Expect = 1e-015
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Frame = -1
Query: 432 YGAMGFGLGIAGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQR- 256
+GA+G G G A ++SQP+++ G GM M+P++ PDGR+GYVLQQPGL P PP R
Sbjct: 382 FGALG-GFG-ASAYSQPLMHAGGHAAGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRH 439
Query: 255 --PRRGDRNNGSSRGSGGENSDDHDGSRGGGRRYRP 154
P RG +GSS SG + S D+ R RY P
Sbjct: 440 SPPYRG--GSGSSSSSGSKRSSDNGRGRS---RYNP 470
>TAIR9_protein||AT5G28390.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:10342024-10342997 REVERSE
Length = 181
Score = 68 bits (165), Expect = 2e-012
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Frame = -1
Query: 402 AGSFSQPMIYGRGSMPTGMQMVPMLFPDGRVGYVLQQPGLQMAPPPPQRPRRGDRNNGSS 223
A ++SQP+++ G GM M+P++ PDGR+ YVLQQPGL P PP RP +
Sbjct: 102 ASAYSQPLMHAGGHAAGGMSMMPIMLPDGRIRYVLQQPGLAAMPQPPPRP------SPPY 155
Query: 222 RGSGGENSDDHDGSRGGGR 166
RG G +S G GR
Sbjct: 156 RGGSGSSSSKQSSDNGRGR 174
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,865,944,198
Number of Sequences: 33410
Number of Extensions: 30865944198
Number of Successful Extensions: 1043872444
Number of sequences better than 0.0: 0
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