BLASTX 7.6.2
Query= UN70420 /QuerySize=648
(647 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C... 88 5e-017
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis
thaliana GN=CDC48C PE=1 SV=2
Length = 820
Score = 88 bits (216), Expect = 5e-017
Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 9/104 (8%)
Frame = +3
Query: 138 MARRGR------SGGMYLRRLSRMMDSCSKDLTTADDIVDHLRSTTREYERSKKNALLIN 299
M RRGR GG+ R LS++MD+C KDL+TA+DIVD LRS + R + LL+N
Sbjct: 1 MGRRGRGGGGGMGGGINRRYLSQVMDTCGKDLSTAEDIVDDLRSRYGNFARLTRQVLLLN 60
Query: 300 VR---NILKSKRLKEEEEDDNSGDQGKRKRQRANKERSEEEEEE 422
VR N+ +KR+K+E+EDDN GD+ QR + R +E+EE+
Sbjct: 61 VRQVLNVRNNKRVKDEDEDDNIGDEEGSASQRKKQRRVDEKEEK 104
Score = 80 bits (195), Expect = 1e-014
Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 15/112 (13%)
Frame = +3
Query: 315 KSKRLKEEEEDDNSGDQG---KRKRQRA-NKERSEEEEEEDSGEVSTSEDAVYSIYGDKL 482
K +R+ E+EE +Q KR +R+ + S EDSG+VSTSEDAV YG+KL
Sbjct: 94 KQRRVDEKEEKLQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGDVSTSEDAV---YGEKL 150
Query: 483 SPPWFDLTSNSVRDGYAKLNTSSEKQI-------VEFENVTTNKGSSSSSKM 617
SPP FDL ++S+RD YAKLN+SS+K I VE E V +NKG S + M
Sbjct: 151 SPPRFDLINDSLRDNYAKLNSSSKKPIGSPAEKNVEVETV-SNKGRSKLATM 201
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,083,943,896
Number of Sequences: 518415
Number of Extensions: 234083943896
Number of Successful Extensions: 1476782252
Number of sequences better than 0.0: 0
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