BLASTX 7.6.2
Query= UN70420 /QuerySize=648
(647 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ... 88 4e-018
>TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr3:231787-235057 FORWARD
Length = 821
Score = 88 bits (216), Expect = 4e-018
Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 9/104 (8%)
Frame = +3
Query: 138 MARRGR------SGGMYLRRLSRMMDSCSKDLTTADDIVDHLRSTTREYERSKKNALLIN 299
M RRGR GG+ R LS++MD+C KDL+TA+DIVD LRS + R + LL+N
Sbjct: 1 MGRRGRGGGGGMGGGINRRYLSQVMDTCGKDLSTAEDIVDDLRSRYGNFARLTRQVLLLN 60
Query: 300 VR---NILKSKRLKEEEEDDNSGDQGKRKRQRANKERSEEEEEE 422
VR N+ +KR+K+E+EDDN GD+ QR + R +E+EE+
Sbjct: 61 VRQVLNVRNNKRVKDEDEDDNIGDEEGSASQRKKQRRVDEKEEK 104
Score = 80 bits (195), Expect = 1e-015
Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 15/112 (13%)
Frame = +3
Query: 315 KSKRLKEEEEDDNSGDQG---KRKRQRA-NKERSEEEEEEDSGEVSTSEDAVYSIYGDKL 482
K +R+ E+EE +Q KR +R+ + S EDSG+VSTSEDAV YG+KL
Sbjct: 94 KQRRVDEKEEKLQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGDVSTSEDAV---YGEKL 150
Query: 483 SPPWFDLTSNSVRDGYAKLNTSSEKQI-------VEFENVTTNKGSSSSSKM 617
SPP FDL ++S+RD YAKLN+SS+K I VE E V +NKG S + M
Sbjct: 151 SPPRFDLINDSLRDNYAKLNSSSKKPIGSPAEKNVEVETV-SNKGRSKLATM 201
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,989,598,402
Number of Sequences: 33410
Number of Extensions: 30989598402
Number of Successful Extensions: 1043926330
Number of sequences better than 0.0: 0
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