BLASTX 7.6.2
Query= UN70431 /QuerySize=727
(726 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9MTH3|Q9MTH3_SINAL Sigma factor 2 OS=Sinapis alba GN=sig2 PE... 149 2e-034
tr|O22056|O22056_ARATH At1g08540 OS=Arabidopsis thaliana GN=SIG1... 142 5e-032
tr|O22455|O22455_ARATH Sigma factor 2 OS=Arabidopsis thaliana GN... 142 5e-032
tr|Q8GWC1|Q8GWC1_ARATH Putative plastid RNA polymerase sigma-sub... 139 3e-031
tr|B9SDA3|B9SDA3_RICCO RNA polymerase sigma factor rpoD1, putati... 83 3e-014
tr|Q710C3|Q710C3_SPIOL Sigma factor OS=Spinacia oleracea GN=sig2... 80 1e-013
tr|B9I6F1|B9I6F1_POPTR Predicted protein OS=Populus trichocarpa ... 76 3e-012
tr|B9IPZ1|B9IPZ1_POPTR Predicted protein OS=Populus trichocarpa ... 69 4e-010
>tr|Q9MTH3|Q9MTH3_SINAL Sigma factor 2 OS=Sinapis alba GN=sig2 PE=2 SV=1
Length = 575
Score = 149 bits (376), Expect = 2e-034
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLFKNTHNSKLSVSSTPDKRSKWDQF 444
+SETLLTSDEAVVAAAAAEA+ALARAALKVAKDATLF N+HN+KLSVSS DKRSKWDQF
Sbjct: 95 ASETLLTSDEAVVAAAAAEAVALARAALKVAKDATLFGNSHNTKLSVSSAADKRSKWDQF 154
Query: 445 TEKERAGILGHLPVSDTGVVSDRVTPP 525
TEKERAGILGHL VSDTGVVSDR+T P
Sbjct: 155 TEKERAGILGHLAVSDTGVVSDRITAP 181
Score = 116 bits (289), Expect = 3e-024
Identities = 62/63 (98%), Gaps = 1/63 (1%)
Frame = +1
Query: 529 RQTERKARRVKGLEKTASGMQ-SVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLT 705
RQTERKARRVKGLEKTASGMQ SVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLT
Sbjct: 215 RQTERKARRVKGLEKTASGMQSSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLT 274
Query: 706 ARE 714
ARE
Sbjct: 275 ARE 277
Score = 91 bits (225), Expect = 8e-017
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 106 MSSCLLPNFKCQPDSFSIHFRTSYSISKHNKSSVYFQPQCAVSTPP 243
MSSCLLPNFKCQPDSFS+HFRTSYS+SKH+K S +FQPQCAVST P
Sbjct: 1 MSSCLLPNFKCQPDSFSVHFRTSYSVSKHSKGSAFFQPQCAVSTSP 46
>tr|O22056|O22056_ARATH At1g08540 OS=Arabidopsis thaliana GN=SIG1 PE=2 SV=2
Length = 572
Score = 142 bits (356), Expect = 5e-032
Identities = 82/131 (62%), Positives = 96/131 (73%), Gaps = 8/131 (6%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLFKNTHNSKLSVSSTPDKRSKWDQF 444
+SETLLTSDEAVV AAAAEA+ALARAA+KVAKDATLFKN++N+ L SST DKRSKWDQF
Sbjct: 95 ASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQF 154
Query: 445 TEKERAGILGHLPVSDTGVVSDRVTPPARQTE-------RKARRVKGLEKTASGMQSVK- 600
TEKERAGILGHL VSD G+VSD++T A E K V+ LE+ S +V+
Sbjct: 155 TEKERAGILGHLAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRS 214
Query: 601 TGSSSRKKRVA 633
T + RK R A
Sbjct: 215 TRQTERKARRA 225
Score = 108 bits (268), Expect = 8e-022
Identities = 63/104 (60%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Frame = +1
Query: 406 SSTPDKRSKWDQFTEK-ERAGILGHLPVSDTGVVSDRVTPPARQTERKARRVKGLEKTAS 582
+S +K S D +EK E +L P V S RQTERKARR KGLEKTAS
Sbjct: 180 ASASNKESIGDLESEKQEEVELLEEQPSVSLAVRS------TRQTERKARRAKGLEKTAS 233
Query: 583 GMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTARE 714
G+ SVKTGSS +KKR+ +QE+DHNDPLRYLRMTTSSSKLLT RE
Sbjct: 234 GIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVRE 277
Score = 85 bits (209), Expect = 6e-015
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +1
Query: 106 MSSCLLPNFKCQPDSFSIHFRTSYSISKHNKSSVYFQPQCAVSTPPA 246
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVST PA
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPA 47
>tr|O22455|O22455_ARATH Sigma factor 2 OS=Arabidopsis thaliana GN=SIG2 PE=2
SV=1
Length = 574
Score = 142 bits (356), Expect = 5e-032
Identities = 82/131 (62%), Positives = 96/131 (73%), Gaps = 8/131 (6%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLFKNTHNSKLSVSSTPDKRSKWDQF 444
+SETLLTSDEAVV AAAAEA+ALARAA+KVAKDATLFKN++N+ L SST DKRSKWDQF
Sbjct: 95 ASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQF 154
Query: 445 TEKERAGILGHLPVSDTGVVSDRVTPPARQTE-------RKARRVKGLEKTASGMQSVK- 600
TEKERAGILGHL VSD G+VSD++T A E K V+ LE+ S +V+
Sbjct: 155 TEKERAGILGHLAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRS 214
Query: 601 TGSSSRKKRVA 633
T + RK R A
Sbjct: 215 TRQTERKARRA 225
Score = 103 bits (255), Expect = 3e-020
Identities = 63/106 (59%), Positives = 72/106 (67%), Gaps = 9/106 (8%)
Frame = +1
Query: 406 SSTPDKRSKWDQFTEK-ERAGILGHLPVSDTGVVSDRVTPPARQTERKARRVKGLEKTAS 582
+S +K S D +EK E +L P V S RQTERKARR KGLEKTAS
Sbjct: 180 ASASNKESIGDLESEKQEEVELLEEQPSVSLAVRS------TRQTERKARRAKGLEKTAS 233
Query: 583 GMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSS--KLLTARE 714
G+ SVKTGSS +KKR+ +QE+DHNDPLRYLRMTTSSS KLLT RE
Sbjct: 234 GIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLKLLTVRE 279
Score = 85 bits (209), Expect = 6e-015
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +1
Query: 106 MSSCLLPNFKCQPDSFSIHFRTSYSISKHNKSSVYFQPQCAVSTPPA 246
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVST PA
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPA 47
>tr|Q8GWC1|Q8GWC1_ARATH Putative plastid RNA polymerase sigma-subunit SIG1
OS=Arabidopsis thaliana GN=At1g08540/F22O13_2 PE=2 SV=1
Length = 572
Score = 139 bits (349), Expect = 3e-031
Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 8/131 (6%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLFKNTHNSKLSVSSTPDKRSKWDQF 444
+SETLLTSDEAVV AAAAEA+ALARAA+KVAKDATLFKN++ + L SST DKRSKWDQF
Sbjct: 95 ASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNYTNLLTSSTADKRSKWDQF 154
Query: 445 TEKERAGILGHLPVSDTGVVSDRVTPPARQTE-------RKARRVKGLEKTAS-GMQSVK 600
TEKERAGILGHL VSD G+VSD++T A E K V+ LE+ S G+
Sbjct: 155 TEKERAGILGHLAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVGLAVRS 214
Query: 601 TGSSSRKKRVA 633
T + RK R A
Sbjct: 215 TRQTERKARRA 225
Score = 107 bits (267), Expect = 1e-021
Identities = 63/104 (60%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Frame = +1
Query: 406 SSTPDKRSKWDQFTEK-ERAGILGHLPVSDTGVVSDRVTPPARQTERKARRVKGLEKTAS 582
+S +K S D +EK E +L P V S RQTERKARR KGLEKTAS
Sbjct: 180 ASASNKESIGDLESEKQEEVELLEEQPSVGLAVRS------TRQTERKARRAKGLEKTAS 233
Query: 583 GMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTARE 714
G+ SVKTGSS +KKR+ +QE+DHNDPLRYLRMTTSSSKLLT RE
Sbjct: 234 GIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVRE 277
Score = 85 bits (209), Expect = 6e-015
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +1
Query: 106 MSSCLLPNFKCQPDSFSIHFRTSYSISKHNKSSVYFQPQCAVSTPPA 246
MSSCLLP FKC PDSFSIHFRTS+ KHNK SV+FQPQCAVST PA
Sbjct: 1 MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPA 47
>tr|B9SDA3|B9SDA3_RICCO RNA polymerase sigma factor rpoD1, putative OS=Ricinus
communis GN=RCOM_1515490 PE=4 SV=1
Length = 569
Score = 83 bits (203), Expect = 3e-014
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +1
Query: 529 RQTERKARRVKGLEKTASGMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTA 708
RQTERKARR + +EK AS + SVK GS+S+KKR + QE+D++DPLRYLR TTS+S+LLTA
Sbjct: 215 RQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTA 274
Query: 709 RE 714
E
Sbjct: 275 SE 276
Score = 80 bits (197), Expect = 1e-013
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLF-KN----THNSKLSVSSTPDKRS 429
++ETL+TSDEAV+AAAAAEA+ALARAA+KVAKDA L KN SKL+ ST D S
Sbjct: 93 ATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTID-AS 151
Query: 430 KWDQFTEKERAGILGHLPVSDTG 498
+W QFTE ERA I+G ++TG
Sbjct: 152 RWPQFTETERARIIGDSVATETG 174
Score = 56 bits (133), Expect = 4e-006
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Frame = +1
Query: 106 MSSCLLPNFKCQPDSFSIHFRTSY------SISKHNKSSVYFQPQCAVST 237
M SCLLP FKCQPD+FSIHFR +Y + S ++ +Y++ QC +ST
Sbjct: 1 MMSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILST 50
>tr|Q710C3|Q710C3_SPIOL Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2
Length = 575
Score = 80 bits (197), Expect = 1e-013
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +1
Query: 529 RQTERKARRVKGLEKTASGMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTA 708
RQ ERKARR + EK AS + SVK GS+SRKKR + QE+D++DPLRYLR T+SS+LLT+
Sbjct: 221 RQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTS 280
Query: 709 RETT 720
E T
Sbjct: 281 SEET 284
>tr|B9I6F1|B9I6F1_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_834586 PE=4 SV=1
Length = 567
Score = 76 bits (185), Expect = 3e-012
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +1
Query: 529 RQTERKARRVKGLEKTASGMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTA 708
RQTERKARR + EK A+ + SVK+GS+S+KKRV QE+D +DPLR+ R +SSS+LL+A
Sbjct: 213 RQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSA 272
Query: 709 RE 714
E
Sbjct: 273 TE 274
Score = 72 bits (176), Expect = 4e-011
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDATLFKNTHNS-----KLSVSSTPDK-R 426
++ETL+ +DEAV+AAAAAEA+ALARAA+KVAKDA ++S K+ ++ST D
Sbjct: 89 AAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSSMKKETKIPIASTTDSFS 148
Query: 427 SKWDQFTEKERAGILGHLPVSDT 495
S W TEKERA I+G ++T
Sbjct: 149 SMWSLLTEKERADIIGDSVSAET 171
>tr|B9IPZ1|B9IPZ1_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_780378 PE=4 SV=1
Length = 564
Score = 69 bits (167), Expect = 4e-010
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Frame = +1
Query: 265 SSETLLTSDEAVVAAAAAEALALARAALKVAKDAT-LFKN----THNSKLSVSSTPDK-R 426
++ETL+ +DEAV+AAAAAEA+ALARAA+KVAKDA + KN +K+ ++ST D
Sbjct: 86 ATETLIINDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETKIPIASTADSFS 145
Query: 427 SKWDQFTEKERAGILGHLPVSDTGV 501
S W T KERA I+G ++TG+
Sbjct: 146 SMWSLLTGKERADIIGVSFSAETGL 170
Score = 67 bits (161), Expect = 2e-009
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = +1
Query: 529 RQTERKARRVKGLEKTASGMQSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTA 708
RQT+RKA+R + EK A+ +K+GS+ +KKRV QE+D +DPLR+ R ++SS+LL+A
Sbjct: 210 RQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSA 269
Query: 709 RE 714
E
Sbjct: 270 TE 271
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,632,552,968,938
Number of Sequences: 11397958
Number of Extensions: 4632552968938
Number of Successful Extensions: 1689677744
Number of sequences better than 0.0: 0
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