BLASTX 7.6.2
Query= UN70497 /QuerySize=674
(673 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|42571735|ref|NP_973958.1| RNA recognition motif-containing pr... 346 2e-093
gi|42562492|ref|NP_174613.2| RNA recognition motif-containing pr... 342 4e-092
gi|297846324|ref|XP_002891043.1| RNA recognition motif-containin... 333 1e-089
gi|255539422|ref|XP_002510776.1| RNA-binding region-containing p... 249 3e-064
gi|147798190|emb|CAN73746.1| hypothetical protein VITISV_041364 ... 231 6e-059
gi|225459959|ref|XP_002266779.1| PREDICTED: hypothetical protein... 231 6e-059
gi|56784732|dbj|BAD81881.1| putative RRM-containing protein SEB-... 222 4e-056
gi|224127746|ref|XP_002329167.1| predicted protein [Populus tric... 211 8e-053
gi|242055167|ref|XP_002456729.1| hypothetical protein SORBIDRAFT... 209 3e-052
gi|12322386|gb|AAG51218.1|AC051630_15 RNA-binding protein; 68390... 191 7e-047
gi|115442349|ref|NP_001045454.1| Os01g0958500 [Oryza sativa Japo... 190 2e-046
gi|255553947|ref|XP_002518014.1| RNA binding protein, putative [... 190 3e-046
gi|255548025|ref|XP_002515069.1| RNA-binding region-containing p... 188 1e-045
gi|297845326|ref|XP_002890544.1| hypothetical protein ARALYDRAFT... 186 3e-045
gi|42571595|ref|NP_973888.1| RNA recognition motif-containing pr... 183 3e-044
gi|42571597|ref|NP_973889.1| RNA recognition motif-containing pr... 183 3e-044
gi|18395177|ref|NP_564184.1| RNA recognition motif-containing pr... 183 3e-044
gi|225453616|ref|XP_002267504.1| PREDICTED: hypothetical protein... 179 3e-043
gi|296089004|emb|CBI38707.3| unnamed protein product [Vitis vini... 179 3e-043
gi|118482964|gb|ABK93394.1| unknown [Populus trichocarpa] 178 6e-043
>gi|42571735|ref|NP_973958.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 244
Score = 346 bits (887), Expect = 2e-093
Identities = 165/178 (92%), Positives = 172/178 (96%), Gaps = 3/178 (1%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHFGTAA-A 475
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HGHVGGRG+KVTSPFKTHFGTAA A
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVTSPFKTHFGTAATA 120
Query: 476 LPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPMTGVAAA 649
+PSP+ FSHYTLPYTNPFGFS YSMDYNYPTSYYNVYGGATAQHPMY +GPMTGVAAA
Sbjct: 121 IPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGPMTGVAAA 178
>gi|42562492|ref|NP_174613.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 245
Score = 342 bits (875), Expect = 4e-092
Identities = 165/179 (92%), Positives = 172/179 (96%), Gaps = 4/179 (2%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHFGTAA-A 475
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HGHVGGRG+KVTSPFKTHFGTAA A
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVTSPFKTHFGTAATA 120
Query: 476 LPSPISFSHYTLPYTNPFGFSPYSMDYNYPT-SYYNVYGGATAQHPMYSTGPMTGVAAA 649
+PSP+ FSHYTLPYTNPFGFS YSMDYNYPT SYYNVYGGATAQHPMY +GPMTGVAAA
Sbjct: 121 IPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPMYGSGPMTGVAAA 179
>gi|297846324|ref|XP_002891043.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 246
Score = 333 bits (853), Expect = 1e-089
Identities = 162/180 (90%), Positives = 170/180 (94%), Gaps = 5/180 (2%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHK+SLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKISLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGR-GVKVTSPFKTHFG-TAA 472
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HGH GGR G+KVTSPFKTHFG AA
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHAGGRGGMKVTSPFKTHFGAAAA 120
Query: 473 ALPSPISFSHYTLPYTNPFGFSPYSMDYNYPT-SYYNVYGGATAQHPMYSTGPMTGVAAA 649
A+PSP+ FSHYTLPYTNPFGFS YSMDYNYPT SYYNVYGGATAQHPMY +GPMTGVAAA
Sbjct: 121 AIPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPMYGSGPMTGVAAA 180
>gi|255539422|ref|XP_002510776.1| RNA-binding region-containing protein,
putative [Ricinus communis]
Length = 259
Score = 249 bits (635), Expect = 3e-064
Identities = 126/192 (65%), Positives = 151/192 (78%), Gaps = 12/192 (6%)
Frame = +2
Query: 110 DMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTF 289
++A DTT+TKVFVGGLAWET K +++ YFEQFG+I+EAVVITDK++GRSKGYGFVTF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKDTMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 290 CDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHFG 463
DPEAA +AC+D APVIDGRRANCNLA+ GVQRS ++P HG GGR ++V S F+T FG
Sbjct: 65 RDPEAAMRACVDSAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGRNLRVISSFQTGFG 124
Query: 464 TAAALPSPISFSHYT----LPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYST--- 622
T A PS SF HY +PY N +G+SPYS +Y YPTSYYNVYGGATAQ+PMY T
Sbjct: 125 T--AFPSAASFPHYAIQQGIPY-NVYGYSPYSPEYTYPTSYYNVYGGATAQYPMYGTGHS 181
Query: 623 GPMTGVAAAYYP 658
G M+G AAA+YP
Sbjct: 182 GMMSGAAAAFYP 193
>gi|147798190|emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis
vinifera]
Length = 269
Score = 231 bits (589), Expect = 6e-059
Identities = 115/190 (60%), Positives = 140/190 (73%), Gaps = 10/190 (5%)
Frame = +2
Query: 110 DMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTF 289
++A DTT+TKVFVGGLAWET K +++ YFEQFG+I+EAVVITDK++GRSKGYGFVTF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTF 64
Query: 290 CDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHF--G 463
+P+AA +AC+D APVIDGRRANCNLA+ GVQRS H GGR +V F+T F G
Sbjct: 65 REPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQTGFQGG 124
Query: 464 TAAALPSPISFSHYT----LPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGP- 628
A PS +F HY +PY N +G+SPYS DY YPTSYY+VYGGA AQ+P+Y GP
Sbjct: 125 VGTAFPSAATFPHYAIQQGIPY-NLYGYSPYSPDYTYPTSYYSVYGGAAAQYPVYGAGPG 183
Query: 629 --MTGVAAAY 652
MTG AA+
Sbjct: 184 GMMTGAGAAF 193
>gi|225459959|ref|XP_002266779.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 264
Score = 231 bits (589), Expect = 6e-059
Identities = 115/190 (60%), Positives = 140/190 (73%), Gaps = 10/190 (5%)
Frame = +2
Query: 110 DMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTF 289
++A DTT+TKVFVGGLAWET K +++ YFEQFG+I+EAVVITDK++GRSKGYGFVTF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTF 64
Query: 290 CDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHF--G 463
+P+AA +AC+D APVIDGRRANCNLA+ GVQRS H GGR +V F+T F G
Sbjct: 65 REPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQTGFQGG 124
Query: 464 TAAALPSPISFSHYT----LPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGP- 628
A PS +F HY +PY N +G+SPYS DY YPTSYY+VYGGA AQ+P+Y GP
Sbjct: 125 VGTAFPSAATFPHYAIQQGIPY-NLYGYSPYSPDYTYPTSYYSVYGGAAAQYPVYGAGPG 183
Query: 629 --MTGVAAAY 652
MTG AA+
Sbjct: 184 GMMTGAGAAF 193
>gi|56784732|dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sativa
Japonica Group]
Length = 300
Score = 222 bits (565), Expect = 4e-056
Identities = 110/188 (58%), Positives = 131/188 (69%), Gaps = 9/188 (4%)
Frame = +2
Query: 107 PDMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVT 286
P + DTT+TKVFVGGLAWET K ++R YFEQFG+I+EAVVITDK++GRSKGYGFVT
Sbjct: 4 PSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYGFVT 63
Query: 287 FCDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHF-- 460
F DP+AA +AC+DPAPVIDGRRANCNLA+ GVQRS P H G R +V F
Sbjct: 64 FRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPPTPQHGGARSFRVMKSFSQQAGI 123
Query: 461 --GTAAALPSPISFSHYTLPYTNP---FGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTG 625
G AA PS +F HY +P P +G+SPYS DY+YPT+YYN+YGG AQ+P Y
Sbjct: 124 QGGLGAAFPSHATFPHYAIPQGLPYHVYGYSPYSPDYSYPTNYYNIYGG--AQYPFYGAA 181
Query: 626 PMTGVAAA 649
AAA
Sbjct: 182 AAAAAAAA 189
>gi|224127746|ref|XP_002329167.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 211 bits (536), Expect = 8e-053
Identities = 108/172 (62%), Positives = 130/172 (75%), Gaps = 10/172 (5%)
Frame = +2
Query: 110 DMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTF 289
++A DTT+TKVFVGGLAWET K +++ YFEQFG+I+EAVVITDK++GRSKGYGFVTF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 290 CDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHF- 460
+P+AA +AC+D APVIDGRRANCNLA+ GVQRS ++P HG GR +V S F+T F
Sbjct: 65 REPDAAMRACVDAAPVIDGRRANCNLASMGVQRSKPSTPKHGG-AGRNFRVMSSFQTGFG 123
Query: 461 -GTAAALPSPISFSHYT----LPYTNPFGFSPYSMDYNYPTSYYNVYGGATA 601
G A P SF HY +PY N +G+S YS DY YPTSYYNVYGGATA
Sbjct: 124 GGVGTAFPPAASFPHYAIQQGMPY-NVYGYSSYSPDYTYPTSYYNVYGGATA 174
>gi|242055167|ref|XP_002456729.1| hypothetical protein SORBIDRAFT_03g041530
[Sorghum bicolor]
Length = 262
Score = 209 bits (531), Expect = 3e-052
Identities = 107/192 (55%), Positives = 133/192 (69%), Gaps = 13/192 (6%)
Frame = +2
Query: 107 PDMAAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVT 286
P + DTT+TKVFVGGLAWET K ++R YFEQFG+I+EAVVITDK++GRSKGYGFVT
Sbjct: 4 PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYGFVT 63
Query: 287 FCDPEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHF-- 460
F DP+AA +AC+DPAPVIDGRRANCNLA+ GVQRS P H G R +V F
Sbjct: 64 FRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPPTPQHGGARNFRVMKSFSQQAGI 123
Query: 461 --GTAAALPSPISFSHYTLPYTNP---FGFSPYSMDYNYPTSYYNVYGGATAQHPMY--- 616
G AA PS +F HY +P P +G+SPY+ D YPT++Y++YGG AQ+P Y
Sbjct: 124 QGGLGAAFPSHATFPHYAIPQGLPYHVYGYSPYTPD-GYPTNFYSIYGG--AQYPFYGGA 180
Query: 617 STGPMTGVAAAY 652
+ G +TG + Y
Sbjct: 181 AAGMVTGTSPFY 192
>gi|12322386|gb|AAG51218.1|AC051630_15 RNA-binding protein; 68390-68829
[Arabidopsis thaliana]
Length = 117
Score = 191 bits (485), Expect = 7e-047
Identities = 92/97 (94%), Positives = 95/97 (97%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHG 409
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HG
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHG 97
>gi|115442349|ref|NP_001045454.1| Os01g0958500 [Oryza sativa Japonica Group]
Length = 310
Score = 190 bits (481), Expect = 2e-046
Identities = 103/177 (58%), Positives = 119/177 (67%), Gaps = 11/177 (6%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT TKVFVGGLAWET K +R YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA
Sbjct: 17 DTTLTKVFVGGLAWETQKEGMRGYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAAM 76
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTS------PVHGHVGGRGVKVTSPFKTHFGTAA 472
KAC DP PVIDGRRANCNLA GVQRS + P GH+ R +K S +T G A
Sbjct: 77 KACFDPYPVIDGRRANCNLAYLGVQRSKAAAASLQPYAGHM--RAMK--SIIQTG-GGGA 131
Query: 473 ALPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPMTGVA 643
+L +P N +G+SPY DY YP SYY YGG AQ+ M++ G G A
Sbjct: 132 SLSMADHGIQQGIPTYNVYGYSPYFSDYGYPLSYYQAYGGLGAQYQMFAGGAAAGAA 188
>gi|255553947|ref|XP_002518014.1| RNA binding protein, putative [Ricinus
communis]
Length = 267
Score = 190 bits (480), Expect = 3e-046
Identities = 96/182 (52%), Positives = 123/182 (67%), Gaps = 5/182 (2%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +L+NYF+QFG+I+EAVVI DK++GRSKGYGFVTF + EAA+
Sbjct: 15 DTTYTKVFVGGLAWETHKETLKNYFQQFGEILEAVVIFDKNTGRSKGYGFVTFKEAEAAR 74
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHF---GTAAALP 481
+AC+D +PVIDGRRANCNLA+ GVQRS H G R +V ++T + G A P
Sbjct: 75 RACVDSSPVIDGRRANCNLASLGVQRSKPSTPQHGGSRNFRVMKSYQTGYQQGGVGTAFP 134
Query: 482 S-PISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYST-GPMTGVAAAYY 655
S P HY + P YS Y PT+YY+ GG ++ + +Y T G T + +Y
Sbjct: 135 STPTQLPHYAIQQGIPCALYGYSPSYTCPTAYYSACGGTSSHYVVYGTVGNGTVSNSNFY 194
Query: 656 PY 661
PY
Sbjct: 195 PY 196
>gi|255548025|ref|XP_002515069.1| RNA-binding region-containing protein,
putative [Ricinus communis]
Length = 291
Score = 188 bits (475), Expect = 1e-045
Identities = 99/182 (54%), Positives = 124/182 (68%), Gaps = 9/182 (4%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTTFTK+FVGGLAWET + ++R YFEQFG+I+EAVVITDK++GRSKGYGFVTF DPEAA
Sbjct: 20 DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAI 79
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGR---GVKVTSPFKTHFGTAAALP 481
+AC +P+PVIDGRRANCNLA+ G ++ SP H GGR V +P H +++ +
Sbjct: 80 RACQNPSPVIDGRRANCNLASLGAHKTRSPTPQHGGGRFRPAPGVVAPPAYHGSSSSYVH 139
Query: 482 SPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGP--MTGVAAAYY 655
P YT PY + +G+S YS D YP +YY VYGG P YS G G+ YY
Sbjct: 140 QPT--GQYTFPY-SAYGYSGYSQDTIYPLNYYGVYGGQQFS-PYYSAGASGTPGMFHNYY 195
Query: 656 PY 661
P+
Sbjct: 196 PF 197
>gi|297845326|ref|XP_002890544.1| hypothetical protein ARALYDRAFT_889804
[Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 186 bits (471), Expect = 3e-045
Identities = 98/181 (54%), Positives = 125/181 (69%), Gaps = 8/181 (4%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +L+ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETLKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
+AC++ PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 RACVEATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPPP 128
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYGGAT-AQHPMYS--TGPMTGVAA 646
P P +F HY N FG+SPYS DY ++PT+ Y +YG + Q+ +Y G G+ A
Sbjct: 129 PQPPTFPHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGNRNGGSGGLTA 188
Query: 647 A 649
A
Sbjct: 189 A 189
>gi|42571595|ref|NP_973888.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 242
Score = 183 bits (462), Expect = 3e-044
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>gi|42571597|ref|NP_973889.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 347
Score = 183 bits (462), Expect = 3e-044
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>gi|18395177|ref|NP_564184.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 249
Score = 183 bits (462), Expect = 3e-044
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>gi|225453616|ref|XP_002267504.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 275
Score = 179 bits (454), Expect = 3e-043
Identities = 93/187 (49%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Frame = +2
Query: 116 AAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCD 295
A DTT+TK+FVGGLAWET + ++R YFEQFG+I EAVVITDK++GRSKGYGFVTF D
Sbjct: 15 AGQFNDTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKD 74
Query: 296 PEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGR---GVKVTSPFKTHFGT 466
P+AA +AC +P+PVIDGRRANCNLA+ G ++ P H GR + +P H +
Sbjct: 75 PDAAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHGAGRFRPAPGLVAPPAYHGSS 134
Query: 467 AAALPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPM--TGV 640
+ P S Y PY+ +G++ YS D YP ++Y+VYGG P Y+TG G+
Sbjct: 135 STYFHQPT--SQYAFPYST-YGYTGYSQDSMYPMNFYSVYGGQQFS-PYYTTGATGPPGI 190
Query: 641 AAAYYPY 661
+YPY
Sbjct: 191 FHNFYPY 197
>gi|296089004|emb|CBI38707.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 179 bits (454), Expect = 3e-043
Identities = 93/187 (49%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Frame = +2
Query: 116 AAVMEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCD 295
A DTT+TK+FVGGLAWET + ++R YFEQFG+I EAVVITDK++GRSKGYGFVTF D
Sbjct: 7 AGQFNDTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKD 66
Query: 296 PEAAQKACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGR---GVKVTSPFKTHFGT 466
P+AA +AC +P+PVIDGRRANCNLA+ G ++ P H GR + +P H +
Sbjct: 67 PDAAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHGAGRFRPAPGLVAPPAYHGSS 126
Query: 467 AAALPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPM--TGV 640
+ P S Y PY+ +G++ YS D YP ++Y+VYGG P Y+TG G+
Sbjct: 127 STYFHQPT--SQYAFPYST-YGYTGYSQDSMYPMNFYSVYGGQQFS-PYYTTGATGPPGI 182
Query: 641 AAAYYPY 661
+YPY
Sbjct: 183 FHNFYPY 189
>gi|118482964|gb|ABK93394.1| unknown [Populus trichocarpa]
Length = 294
Score = 178 bits (451), Expect = 6e-043
Identities = 96/186 (51%), Positives = 120/186 (64%), Gaps = 15/186 (8%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TK+FVGGLAWET + ++R YFEQFG+I+EAVVITDK++GRSKGYGFVTF DPEAA
Sbjct: 21 DTTYTKIFVGGLAWETQRDAMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAV 80
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGR-----GVKVTSPFKTHFGTAAA 475
+AC +P+PVIDGRRANCNLA+ G Q++ P H GR G+ F
Sbjct: 81 RACQNPSPVIDGRRANCNLASLGGQKNRPPTPQHGTGRFRPVHGLVAPPTFPGSSAPYIY 140
Query: 476 LPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPMTGVAAAY- 652
PS Y+ PY + +G++ YS D YP SYY VYGG P YSTG +G +
Sbjct: 141 QPS----GQYSFPY-SAYGYAGYSQDAMYPLSYYGVYGGQQFS-PYYSTGGASGTPGMFP 194
Query: 653 ---YPY 661
YP+
Sbjct: 195 HNLYPF 200
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 555,700,182,581
Number of Sequences: 15229318
Number of Extensions: 555700182581
Number of Successful Extensions: 174766259
Number of sequences better than 0.0: 0
|
