BLASTX 7.6.2
Query= UN70497 /QuerySize=674
(673 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G33470.2 | Symbols: | RNA recognition motif (... 351 2e-097
TAIR9_protein||AT1G33470.1 | Symbols: | RNA recognition motif (... 345 2e-095
TAIR9_protein||AT1G22910.2 | Symbols: | RNA recognition motif (... 183 1e-046
TAIR9_protein||AT1G22910.1 | Symbols: | RNA recognition motif (... 183 1e-046
TAIR9_protein||AT1G22910.3 | Symbols: | RNA recognition motif (... 183 1e-046
TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (... 159 2e-039
TAIR9_protein||AT2G46780.1 | Symbols: | RNA binding / nucleic a... 156 1e-038
TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (... 147 7e-036
TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic a... 138 4e-033
TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (... 137 9e-033
TAIR9_protein||AT1G78260.2 | Symbols: | RNA recognition motif (... 137 9e-033
TAIR9_protein||AT3G54770.1 | Symbols: | RNA recognition motif (... 122 2e-028
TAIR9_protein||AT5G11412.1 | Symbols: | nucleic acid binding / ... 114 8e-026
TAIR9_protein||AT5G53680.1 | Symbols: | RNA recognition motif (... 104 9e-023
TAIR9_protein||AT3G06970.1 | Symbols: | RNA binding / nucleic a... 100 9e-022
TAIR9_protein||AT5G53720.1 | Symbols: | RNA recognition motif (... 86 1e-017
TAIR9_protein||AT3G54770.2 | Symbols: | RNA recognition motif (... 86 2e-017
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 81 6e-016
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 81 6e-016
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 81 6e-016
>TAIR9_protein||AT1G33470.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:12144632-12146040 FORWARD
Length = 245
Score = 351 bits (900), Expect = 2e-097
Identities = 169/187 (90%), Positives = 177/187 (94%), Gaps = 7/187 (3%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHFGTAA-A 475
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HGHVGGRG+KVTSPFKTHFGTAA A
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVTSPFKTHFGTAATA 120
Query: 476 LPSPISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPMTGVAAA-- 649
+PSP+ FSHYTLPYTNPFGFS YSMDYNYPTSYYNVYGGATAQHPMY +GPMTGVAAA
Sbjct: 121 IPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGPMTGVAAAPA 180
Query: 650 --YYPYL 664
+YPYL
Sbjct: 181 AGFYPYL 187
>TAIR9_protein||AT1G33470.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:12144632-12146040 FORWARD
Length = 246
Score = 345 bits (884), Expect = 2e-095
Identities = 168/187 (89%), Positives = 176/187 (94%), Gaps = 8/187 (4%)
Frame = +2
Query: 125 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 304
MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA
Sbjct: 1 MEDTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEA 60
Query: 305 AQKACIDPAPVIDGRRANCNLAAFGVQRS--TSPVHGHVGGRGVKVTSPFKTHFGTAA-A 475
AQKAC+DPAPVIDGRRANCNLAAFGVQRS +SP+HGHVGGRG+KVTSPFKTHFGTAA A
Sbjct: 61 AQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVTSPFKTHFGTAATA 120
Query: 476 LPSPISFSHYTLPYTNPFGFSPYSMDYNYPT-SYYNVYGGATAQHPMYSTGPMTGVAAA- 649
+PSP+ FSHYTLPYTNPFGFS YSMDYNYPT SYYNVYGGATAQHPMY +GPMTGVAAA
Sbjct: 121 IPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPMYGSGPMTGVAAAP 180
Query: 650 ---YYPY 661
+YPY
Sbjct: 181 AAGFYPY 187
>TAIR9_protein||AT1G22910.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107618 FORWARD
Length = 243
Score = 183 bits (462), Expect = 1e-046
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>TAIR9_protein||AT1G22910.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107659 FORWARD
Length = 250
Score = 183 bits (462), Expect = 1e-046
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>TAIR9_protein||AT1G22910.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107949 FORWARD
Length = 348
Score = 183 bits (462), Expect = 1e-046
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 6/158 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWETHK +++ +FEQFG+I+EAVVITDK+SGRSKGYGFVTF + EAA+
Sbjct: 9 DTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAAR 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVK----VTSPFKTHFGTAAAL 478
AC+D PVIDGRRANCNLA+ G+QRS H GG + + S +T FG
Sbjct: 69 SACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVMMSTMQTGFGPPPP- 127
Query: 479 PSPISFSHYTLPYTNPFGFSPYSMDY-NYPTSYYNVYG 589
P P +F+HY N FG+SPYS DY ++PT+ Y +YG
Sbjct: 128 PQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYG 165
>TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:7262879-7264834 REVERSE
Length = 275
Score = 159 bits (401), Expect = 2e-039
Identities = 90/167 (53%), Positives = 107/167 (64%), Gaps = 17/167 (10%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTTFTKVFVGGLAWET +LR +F+Q+GDI+EAVVITDK++GRSKGYGFVTF DPEAA+
Sbjct: 20 DTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAAR 79
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSP----VHGHVGGR-------GVKVTSPFKTH 457
+AC+DP P+IDGRRANCNLA+ G RS P V H GR V SP H
Sbjct: 80 RACVDPTPIIDGRRANCNLASLG--RSRPPMQYAVIPHAPGRVRPPSPYVGSVQSPRGLH 137
Query: 458 FGTAAALPSPISFSHYTLPYTNPFGFSPYSMDYNYPTS--YYNVYGG 592
FG+ P +Y P+G +PY DY Y S +Y Y G
Sbjct: 138 FGSHPYHQPPT--YNYQQGVVYPYGVTPYGPDYMYSQSQGFYGPYMG 182
>TAIR9_protein||AT2G46780.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr2:19229516-19231043 FORWARD
Length = 337
Score = 156 bits (394), Expect = 1e-038
Identities = 93/187 (49%), Positives = 115/187 (61%), Gaps = 25/187 (13%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DT TK+FVGGLAWET + ++R YFEQFG+IVEAVVITDK++GRSKGYGFVTF + EAA
Sbjct: 18 DTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAM 77
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQR---STSPVHG----HVGGRGVKVTSPFKTHFGTA 469
+AC + PVIDGRRANCNLA G Q+ TSP HG G GV + +P G++
Sbjct: 78 RACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFRSPGSGVGLVAPSPQFRGSS 137
Query: 470 AALPSPISFSH---------YTLPYTNPFGFSPYSMDYNYPTSYYN--VYGGATAQHPMY 616
S +F H + PY+ +GFS YS + YP +YYN +YGG Q Y
Sbjct: 138 ----SSSAFVHQQQQQHTAQFPFPYST-YGFSGYSQEGMYPMNYYNHHLYGG--QQFSPY 190
Query: 617 STGPMTG 637
P G
Sbjct: 191 MGHPSAG 197
>TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28686932-28688506 REVERSE
Length = 286
Score = 147 bits (370), Expect = 7e-036
Identities = 88/180 (48%), Positives = 106/180 (58%), Gaps = 20/180 (11%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTTFTKVFVGGLAWET +LR +FEQ+G+I+EAVVI DK++GRSKGYGFVTF DPEAA+
Sbjct: 20 DTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAAR 79
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSP--VHGHVGGRGVKVTSPFKTHFGTAAALPS 484
+AC DP P+IDGRRANCNLA+ G R P V ++ GR P + G P
Sbjct: 80 RACADPTPIIDGRRANCNLASLGRPRPPLPYAVIPNMPGR----LRPASPYIGNVQG-PR 134
Query: 485 PISFSHYTLPYTNPFGFSPYSMDYNYPTSYYNVYGGATAQHPMYSTGPMTGVAAAYYPYL 664
+Y PY P + YNY Y G TA P Y G+ Y PY+
Sbjct: 135 GSLIGNY--PYQQP-------LPYNYQQGVVYPY-GVTAYGPEYMYSQSQGL---YSPYM 181
>TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr1:7886693-7889241 FORWARD
Length = 292
Score = 138 bits (346), Expect = 4e-033
Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 21/191 (10%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT TKVFVGGLAWET +R YF+QFG+I+EAV+ITDK++G+SKGYGFVTF D ++A
Sbjct: 13 DTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSAT 72
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHFGTAAALPSPI 490
+A DP PVIDGR+ANCN+A+FG R ++P GG + ++ + AA
Sbjct: 73 RAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSSYTGMAAPVQQA 132
Query: 491 SFSHYTLPYTNPFGFSPYSMDYNYPTSYYN------------VYGGATAQHPMYSTGPMT 634
+ + P +G++ Y+ +Y Y + YN +YGG A P S
Sbjct: 133 AAAQLMYP---SYGYT-YNSEYGYHQALYNAQLQQAQYYQQQMYGGGGATSPSSS----- 183
Query: 635 GVAAAYYPYLQ 667
+ + Y YLQ
Sbjct: 184 NIMPSPYYYLQ 194
>TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:29447317-29450181 FORWARD
Length = 288
Score = 137 bits (343), Expect = 9e-033
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWET +R YFEQFG+I+EAV+ITDK++G+SKGYGFVTF + ++A
Sbjct: 13 DTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSAT 72
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSP-VHGHVGGRGVKVTSPFKTHFGTAAALPSP 487
+A DP PVIDGR+ANCN+A+FG R + P G G + T+ G AA LP P
Sbjct: 73 RAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSTYTGMAAPLP-P 131
Query: 488 ISFSHYTLPYTNPFGFSPYSMDYNYPTSYYN 580
+ P +G++ + Y + YN
Sbjct: 132 AAAPQLMYP---SYGYTYNPDQFGYHQALYN 159
>TAIR9_protein||AT1G78260.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:29447317-29449246 FORWARD
Length = 272
Score = 137 bits (343), Expect = 9e-033
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTT+TKVFVGGLAWET +R YFEQFG+I+EAV+ITDK++G+SKGYGFVTF + ++A
Sbjct: 13 DTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSAT 72
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSP-VHGHVGGRGVKVTSPFKTHFGTAAALPSP 487
+A DP PVIDGR+ANCN+A+FG R + P G G + T+ G AA LP P
Sbjct: 73 RAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSTYTGMAAPLP-P 131
Query: 488 ISFSHYTLPYTNPFGFSPYSMDYNYPTSYYN 580
+ P +G++ + Y + YN
Sbjct: 132 AAAPQLMYP---SYGYTYNPDQFGYHQALYN 159
>TAIR9_protein||AT3G54770.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:20273863-20275827 REVERSE
Length = 262
Score = 122 bits (305), Expect = 2e-028
Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 22/157 (14%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DT TKVFVGGLAW+THK ++ ++F ++GDI+EAV+I+DK + RSKGYGFVTF D +AA
Sbjct: 13 DTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAAT 72
Query: 311 KACIDPAPVIDGRRANCNLAAFG--VQRS---TSPVHGHVGGRGVKVTSPFKTHFGTAAA 475
+AC D P+I+GRRANCNLA+ G +++S TSP G G + T P H G +
Sbjct: 73 RACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQGPKNGN--RATPP---HVGNHSQ 127
Query: 476 LPSPISFSHYTLPYTN----PFGFSPYSMDYNYPTSY 574
P F++ N PF Y YP++Y
Sbjct: 128 WYYPSGFTNQQHQQQNHQAVPF--------YGYPSAY 156
>TAIR9_protein||AT5G11412.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:3640349-3640876 REVERSE
Length = 176
Score = 114 bits (283), Expect = 8e-026
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DT +TK++VGGL WET LR+YFEQFGDI+ ++ D+ +GRS+GYGFVTF D E+A
Sbjct: 48 DTRYTKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESAT 107
Query: 311 KACIDPAPVIDGRRANCNLAAFG 379
+AC +P PVIDGR A CNLA G
Sbjct: 108 RACQNPKPVIDGREAKCNLAYIG 130
>TAIR9_protein||AT5G53680.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:21798382-21799109 FORWARD
Length = 170
Score = 104 bits (257), Expect = 9e-023
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DTTFTK++VGGL W T K L N+F++FG+I+ V+ D+ + RS+GYGFVTF D E+A
Sbjct: 9 DTTFTKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESAT 68
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQ 385
+AC DP P I+GR NC LA G +
Sbjct: 69 RACKDPNPTIEGRITNCKLAFVGAK 93
>TAIR9_protein||AT3G06970.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:2199653-2201150 REVERSE
Length = 318
Score = 100 bits (248), Expect = 9e-022
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Frame = +2
Query: 131 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 310
DT TK+FVG L W T LR YFEQFG +V+A V+++ GRSKGYGF+TF D +
Sbjct: 8 DTRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVSTV 67
Query: 311 KACIDPAPVIDGRRANCNLAAFGVQRSTSPVHGHVGGRGVKVTSPFKTHFGTAAALP--S 484
+A + P+IDGR NCNLA+ G +++ + H ++ G V P + +P
Sbjct: 68 RALQNSKPIIDGRTTNCNLASAGAKQNMN--HPNLNGSFNYVIPPHQYQQAPQHVIPYCP 125
Query: 485 PISFSHYTLPYTNPFGFSPYSMDYNYPT 568
P +++H Y + +P Y YPT
Sbjct: 126 PHTWNHVWGQYIYMYNNNPC---YYYPT 150
>TAIR9_protein||AT5G53720.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:21806622-21807012 FORWARD
Length = 101
Score = 86 bits (212), Expect = 1e-017
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +2
Query: 143 TKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACI 322
TK++V GL W T L +YFE+FG+IV A V+ D ++ RSKG+GFVTF + E+A +AC
Sbjct: 9 TKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRACE 68
Query: 323 DPAPVIDGRRANCNLAAFGVQ 385
+P IDGR NC LA G +
Sbjct: 69 NPNHTIDGRTVNCKLAYLGAR 89
>TAIR9_protein||AT3G54770.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:20273863-20275731 REVERSE
Length = 219
Score = 86 bits (210), Expect = 2e-017
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 20/135 (14%)
Frame = +2
Query: 197 NYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACIDPAPVIDGRRANCNLAAF 376
++F ++GDI+EAV+I+DK + RSKGYGFVTF D +AA +AC D P+I+GRRANCNLA+
Sbjct: 3 DHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLASL 62
Query: 377 GVQRSTSPVHGHVGGRGVKVTSPFKTHFGTAAALPSPISF--------SHYTLP-YTNPF 529
G + P +G+ + T P H G + P F +H +P Y P
Sbjct: 63 GGR--LRPKNGN------RATPP---HVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGYPS 111
Query: 530 GFSPYSMDYNYPTSY 574
+ +M +N Y
Sbjct: 112 AYVAPNMTFNQKVGY 126
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 81 bits (198), Expect = 6e-016
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +2
Query: 146 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACID 325
K+F+GG++W+T + LR+YF +GD+VEAV++ D+++GR++G+GF+ F DP +++ +D
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 326 PAPVIDGRRANCNLAA-----FGVQRSTSPVH--GHVGGRGVKVTSPFKTHFGTAAALPS 484
+IDGR A ++R SP+H V G G + F LPS
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIF------VGGLPS 119
Query: 485 PISFSHYTLPYTNPFG 532
I+ + Y + FG
Sbjct: 120 SITEEEFK-NYFDQFG 134
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 81 bits (198), Expect = 6e-016
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +2
Query: 146 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACID 325
K+F+GG++W+T + LR+YF +GD+VEAV++ D+++GR++G+GF+ F DP +++ +D
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 326 PAPVIDGRRANCNLAA-----FGVQRSTSPVH--GHVGGRGVKVTSPFKTHFGTAAALPS 484
+IDGR A ++R SP+H V G G + F LPS
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIF------VGGLPS 119
Query: 485 PISFSHYTLPYTNPFG 532
I+ + Y + FG
Sbjct: 120 SITEEEFK-NYFDQFG 134
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 81 bits (198), Expect = 6e-016
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +2
Query: 146 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACID 325
K+F+GG++W+T + LR+YF +GD+VEAV++ D+++GR++G+GF+ F DP +++ +D
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 326 PAPVIDGRRANCNLAA-----FGVQRSTSPVH--GHVGGRGVKVTSPFKTHFGTAAALPS 484
+IDGR A ++R SP+H V G G + F LPS
Sbjct: 67 -KHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIF------VGGLPS 119
Query: 485 PISFSHYTLPYTNPFG 532
I+ + Y + FG
Sbjct: 120 SITEEEFK-NYFDQFG 134
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,083,343,771
Number of Sequences: 33410
Number of Extensions: 31083343771
Number of Successful Extensions: 1049125688
Number of sequences better than 0.0: 0
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