BLASTX 7.6.2
Query= UN70600 /QuerySize=646
(645 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotei... 238 3e-063
TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotei... 213 1e-055
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 66 1e-011
TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, pu... 64 5e-011
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 62 3e-010
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 61 4e-010
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 61 4e-010
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 61 4e-010
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 60 1e-009
TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, pu... 56 1e-008
TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, pu... 56 1e-008
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 55 2e-008
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 55 2e-008
TAIR9_protein||AT5G09880.1 | Symbols: | RNA recognition motif (... 50 8e-007
TAIR9_protein||AT5G04600.1 | Symbols: | RNA recognition motif (... 49 3e-006
>TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 295
Score = 238 bits (605), Expect = 3e-063
Identities = 146/198 (73%), Positives = 159/198 (80%), Gaps = 19/198 (9%)
Frame = +3
Query: 27 SSSCFAIPL-SSSRSSSNAIPKCKTL--TSSCFYVASLK---ASSTSFHLSSLSR----Q 176
++SCFAIPL SSSRSS NAIPK KTL +SS Y+ SLK +SS SFH SSLSR Q
Sbjct: 2 AASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQ 61
Query: 177 RLQLKVSSSSSELSVLDEAKQEEEEVKVDGETGEE---TEAEPVVTKKPRPCELYVCNIP 347
LQ+KV SSSELSVLDE K EEE VK + E ++ ++AEPV KKPRPCELYVCNIP
Sbjct: 62 PLQIKV--SSSELSVLDEEK-EEEVVKGEAEPNKDSVVSKAEPV--KKPRPCELYVCNIP 116
Query: 348 RSYDITQLLDMFQSFGTVISVE-VSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVG 524
RSYDI QLLDMFQ FGTVISVE VSRNP+TGESRGSGYVTM SINSAK A ASLDG EVG
Sbjct: 117 RSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVG 176
Query: 525 GREMRVRYSVDMNPGTRK 578
GREMRVRYSVDMNPGTR+
Sbjct: 177 GREMRVRYSVDMNPGTRR 194
>TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 294
Score = 213 bits (540), Expect = 1e-055
Identities = 125/169 (73%), Positives = 136/169 (80%), Gaps = 15/169 (8%)
Frame = +3
Query: 102 TSSCFYVASLK---ASSTSFHLSSLSR----QRLQLKVSSSSSELSVLDEAKQEEEEVKV 260
+SS Y+ SLK +SS SFH SSLSR Q LQ+KV SSSELSVLDE K EEE VK
Sbjct: 30 SSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQPLQIKV--SSSELSVLDEEK-EEEVVKG 86
Query: 261 DGETGEE---TEAEPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPE 431
+ E ++ ++AEPV KKPRPCELYVCNIPRSYDI QLLDMFQ FGTVISVEVSRNP+
Sbjct: 87 EAEPNKDSVVSKAEPV--KKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQ 144
Query: 432 TGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRVRYSVDMNPGTRK 578
TGESRGSGYVTM SINSAK A ASLDG EVGGREMRVRYSVDMNPGTR+
Sbjct: 145 TGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRR 193
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 66 bits (160), Expect = 1e-011
Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Frame = +3
Query: 54 SSSRSSSNAIPKCKTLTSSCFYVASLKASSTSFHLSSLSRQ-RLQLKVSSSSSELSVLDE 230
+SS + S+ PK S SL + S SF L+S S + K +S +S + +
Sbjct: 5 ASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA-RNV 63
Query: 231 AKQEEEEVKVDGETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISV 410
A E EV+ DG A P +L+V N+P + D QL +F+S G V V
Sbjct: 64 AITSEFEVEEDGFA---DVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMV 120
Query: 411 EVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRV 542
EV + TG SRG G+VTMSS++ + A +G E+ GR +RV
Sbjct: 121 EVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRV 164
Score = 51 bits (120), Expect = 6e-007
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +3
Query: 327 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASL 506
+YV N+ D L +F G V+ V + ++G S+G G+VT S +NA SL
Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265
Query: 507 DGNEVGGREMRV 542
DG ++ GR++RV
Sbjct: 266 DGADLDGRQIRV 277
>TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, putative |
chr4:1376612-1379275 REVERSE
Length = 442
Score = 64 bits (155), Expect = 5e-011
Identities = 33/91 (36%), Positives = 54/91 (59%)
Frame = +3
Query: 297 VVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSI 476
V T+ P L++ NIPR + +L FQSFG V+S +V + TG S+ G+V+ S
Sbjct: 341 VQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQ 400
Query: 477 NSAKNATASLDGNEVGGREMRVRYSVDMNPG 569
+A+NA ++G +GG++++V+ D N G
Sbjct: 401 AAAQNAIDMMNGRHLGGKKLKVQLKRDSNNG 431
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 62 bits (149), Expect = 3e-010
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Frame = +3
Query: 21 AASSSCFAIPLSSSRSSSNAIPKCKTLTSSCFYVASLKASSTSFHLSSLSRQRLQLKVSS 200
++SS+ F IP + SSS + +L+S + + + L S + + V+
Sbjct: 18 SSSSTLFCIPSIFNISSSESHRFNFSLSS--------RPVNLTLSLKSKTLRNSSPVVTF 69
Query: 201 SSSELSVLDEAKQEEEEVKVDGETGEET-EAEPVV--TKKPRPCELYVCNIPRSYDITQL 371
S + +E + E+ + T +E+ E+E V + P +L+V N+P D L
Sbjct: 70 VSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 129
Query: 372 LDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRVRYS 551
+F+ GTV EV N +T +SRG G+VTMS++ A+ A + EV GR + V +
Sbjct: 130 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 189
Query: 552 VDMNPGTRKTHQP 590
G+R QP
Sbjct: 190 APR--GSRPERQP 200
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 61 bits (147), Expect = 4e-010
Identities = 49/144 (34%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Frame = +3
Query: 180 LQLKVSSSSSELSVLDE---AKQEEEEVKVDGETGEETEAEPVVTKKPRPCELYVCNIPR 350
L + S S VL E K EEEE K DG + V TK LY N+P
Sbjct: 42 LLISSRSCSRRFRVLSETITVKLEEEE-KDDGASAVLDPPAAVNTK------LYFGNLPY 94
Query: 351 SYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGR 530
+ D L + Q F VEV N +TG+SRG +VTMS++ +LDG E GR
Sbjct: 95 NVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGR 154
Query: 531 EMRVRYSVDMNPGTRKTHQP*TRH 602
++V ++ P + P T H
Sbjct: 155 ALKVNFADKPKPNKEPLY-PETEH 177
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 61 bits (147), Expect = 4e-010
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Frame = +3
Query: 54 SSSRSSSNAIPKCKTLTSSCFYV-ASLKASSTSFHLSSLSRQRLQLKVSSSSSELS--VL 224
S S + ++P C + +S + SL S HL S+ LK SS + S V
Sbjct: 7 SLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASS-ALKCSSPAEYPSRFVR 65
Query: 225 DEAKQEEEEVKVDGETGEETEAEPVVTKKPRP-CELYVCNIPRSYDITQLLDMFQSFGTV 401
+ A + EV+ D + ++ PV P +L+V N+ + D QL +F+S G V
Sbjct: 66 NVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNV 125
Query: 402 ISVEVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRV 542
VEV + TG SRG G+VTMS+ + A +G E GR +RV
Sbjct: 126 EMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRV 172
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 61 bits (147), Expect = 4e-010
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Frame = +3
Query: 54 SSSRSSSNAIPKCKTLTSSCFYV-ASLKASSTSFHLSSLSRQRLQLKVSSSSSELS--VL 224
S S + ++P C + +S + SL S HL S+ LK SS + S V
Sbjct: 7 SLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASS-ALKCSSPAEYPSRFVR 65
Query: 225 DEAKQEEEEVKVDGETGEETEAEPVVTKKPRP-CELYVCNIPRSYDITQLLDMFQSFGTV 401
+ A + EV+ D + ++ PV P +L+V N+ + D QL +F+S G V
Sbjct: 66 NVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNV 125
Query: 402 ISVEVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRV 542
VEV + TG SRG G+VTMS+ + A +G E GR +RV
Sbjct: 126 EMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRV 172
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 60 bits (144), Expect = 1e-009
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +3
Query: 327 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASL 506
+YV N+P D +L +F G V+ V + ETG SRG G+VTMS ++ A ++L
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 507 DGNEVGGREMRVRYSVDMNP 566
DG + GR +RV + + P
Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325
Score = 59 bits (140), Expect = 3e-009
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Frame = +3
Query: 45 IPLSSSRSSSNAIPKCKT-LTSSCFYVASLKASSTSFHLSSLSRQRLQLKVSSSSSELSV 221
+PLS SR S + K KT L S F + S + S + + S S ++S
Sbjct: 52 LPLSFSRVSLSL--KTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSE 109
Query: 222 LDEAKQEEEEVKV-DGETGEETEAEPVVTKK---PRPCE---LYVCNIPRSYDITQLLDM 380
DE++ + E V +G+ E +E V+++ P P E L+V N+ + L +
Sbjct: 110 GDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAML 169
Query: 381 FQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASLDGNEVGGREMRV 542
F+ GTV EV N ET +SRG G+VTMSS++ A+ A + ++ GR + V
Sbjct: 170 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTV 223
>TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 430
Score = 56 bits (134), Expect = 1e-008
Identities = 27/85 (31%), Positives = 52/85 (61%)
Frame = +3
Query: 303 TKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINS 482
T+ P L++ NIPR ++ +L FQ FG V+S +V + TG S+ G+++ S +
Sbjct: 324 TEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAA 383
Query: 483 AKNATASLDGNEVGGREMRVRYSVD 557
A+NA +++G ++ G++++V+ D
Sbjct: 384 AQNAINTMNGCQLSGKKLKVQLKRD 408
>TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 439
Score = 56 bits (134), Expect = 1e-008
Identities = 27/85 (31%), Positives = 52/85 (61%)
Frame = +3
Query: 303 TKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINS 482
T+ P L++ NIPR ++ +L FQ FG V+S +V + TG S+ G+++ S +
Sbjct: 333 TEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAA 392
Query: 483 AKNATASLDGNEVGGREMRVRYSVD 557
A+NA +++G ++ G++++V+ D
Sbjct: 393 AQNAINTMNGCQLSGKKLKVQLKRD 417
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 55 bits (132), Expect = 2e-008
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +3
Query: 120 VASLKASSTSFHLSSLSRQRLQLKVSSSSSELSVLDEAKQEEEEVKVDGETGEETEAEPV 299
V S+K + SF S + ++ V SS S L + ETE +P
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPS-LAGTFSRSSRTRFIPYAVTETEEKPA 66
Query: 300 VTKKPRPC--ELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 473
+Y+ NIPR+ QL + + G V V+V + +G SR G+ TM S
Sbjct: 67 ALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKS 126
Query: 474 INSAKNATASLDGNEVGGREMRV 542
+ A L+GN V GRE++V
Sbjct: 127 VEDANAVVEKLNGNTVEGREIKV 149
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 55 bits (132), Expect = 2e-008
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +3
Query: 120 VASLKASSTSFHLSSLSRQRLQLKVSSSSSELSVLDEAKQEEEEVKVDGETGEETEAEPV 299
V S+K + SF S + ++ V SS S L + ETE +P
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPS-LAGTFSRSSRTRFIPYAVTETEEKPA 66
Query: 300 VTKKPRPC--ELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 473
+Y+ NIPR+ QL + + G V V+V + +G SR G+ TM S
Sbjct: 67 ALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKS 126
Query: 474 INSAKNATASLDGNEVGGREMRV 542
+ A L+GN V GRE++V
Sbjct: 127 VEDANAVVEKLNGNTVEGREIKV 149
>TAIR9_protein||AT5G09880.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:3081646-3085179 REVERSE
Length = 528
Score = 50 bits (119), Expect = 8e-007
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +3
Query: 312 PRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKN 491
P +LYV N+ + QL +F++FG V V++ +PETG+ +G G++ + +K
Sbjct: 262 PADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKA 321
Query: 492 ATASLDGN-EVGGREMRVRYSVDMNPGTR 575
A +L+G E+ GR ++V SV + GT+
Sbjct: 322 AQIALNGKLEIAGRTIKVS-SVSDHIGTQ 349
>TAIR9_protein||AT5G04600.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:1323700-1325486 FORWARD
Length = 223
Score = 49 bits (114), Expect = 3e-006
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Frame = +3
Query: 162 SLSRQRLQLKVSSSSSELSVLDEAKQEEEEVKVDGETGEETEAEPVVTK--KPRPCELYV 335
+L + ++ S+SSS+L + K + + ++G + PV T + + LY+
Sbjct: 8 ALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKA---PVTTPPLQNKATVLYI 64
Query: 336 CNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNATASLD 509
IP + T++ F FGTV V V+RN +TG+S+ G++ A+ A +++
Sbjct: 65 GRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAMN 122
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,083,343,771
Number of Sequences: 33410
Number of Extensions: 31083343771
Number of Successful Extensions: 1049125688
Number of sequences better than 0.0: 0
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