BLASTX 7.6.2
Query= UN70646 /QuerySize=790
(789 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALI... 210 1e-054
TAIR9_protein||AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALI... 204 6e-053
TAIR9_protein||AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INH... 154 9e-038
TAIR9_protein||AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 ... 147 9e-036
TAIR9_protein||AT4G24390.2 | Symbols: | F-box family protein (F... 119 3e-027
TAIR9_protein||AT4G24390.1 | Symbols: | F-box family protein (F... 119 3e-027
TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box p... 114 6e-026
TAIR9_protein||AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE IN... 110 2e-024
>TAIR9_protein||AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2);
auxin binding / ubiquitin-protein ligase | chr3:9868342-9870464
FORWARD
Length = 576
Score = 210 bits (532), Expect = 1e-054
Identities = 97/105 (92%), Positives = 100/105 (95%)
Frame = +1
Query: 394 MNYFPDEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRF 573
MNYFPDEVIEHVFDFVTSHKDRN+ISLVCKSW+KIERYSRQ VFIGNCY+I PERLLRRF
Sbjct: 1 MNYFPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRF 60
Query: 574 PCFKSLTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
PC KSLTLKGKPHFADFNLVPH WGGFV PWIEALARSRVGLEEL
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEEL 105
>TAIR9_protein||AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3);
auxin binding / ubiquitin-protein ligase | chr1:4368879-4370780
REVERSE
Length = 578
Score = 204 bits (518), Expect = 6e-053
Identities = 94/105 (89%), Positives = 98/105 (93%)
Frame = +1
Query: 394 MNYFPDEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRF 573
MNYFPDEVIEHVFDFV SHKDRNSISLVCKSW KIER+SR+ VFIGNCY+I PERL+RRF
Sbjct: 1 MNYFPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRF 60
Query: 574 PCFKSLTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
PC KSLTLKGKPHFADFNLVPH WGGFV PWIEALARSRVGLEEL
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEEL 105
>TAIR9_protein||AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE
1); auxin binding / protein binding / ubiquitin-protein ligase |
chr3:23273479-23276181 REVERSE
Length = 595
Score = 154 bits (387), Expect = 9e-038
Identities = 66/102 (64%), Positives = 84/102 (82%)
Frame = +1
Query: 403 FPDEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRFPCF 582
FP+EV+EHVF F+ KDRNS+SLVCKSW++IER+ R+ VFIGNCY++ P ++RRFP
Sbjct: 9 FPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKV 68
Query: 583 KSLTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
+S+ LKGKPHFADFNLVP GWGG+V PWIEA++ S LEE+
Sbjct: 69 RSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEI 110
>TAIR9_protein||AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE
PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase
| chr4:1405108-1407057 REVERSE
Length = 586
Score = 147 bits (370), Expect = 9e-036
Identities = 62/102 (60%), Positives = 81/102 (79%)
Frame = +1
Query: 403 FPDEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRFPCF 582
FP +V+EH+ F+ S++DRNS+SLVCKSWF+ ER +R+ VF+GNCY++ P + RRFP
Sbjct: 5 FPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEM 64
Query: 583 KSLTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
+SLTLKGKPHFAD+NLVP GWGG+ PWIEA+A LEE+
Sbjct: 65 RSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEI 106
>TAIR9_protein||AT4G24390.2 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 624
Score = 119 bits (297), Expect = 3e-027
Identities = 52/100 (52%), Positives = 72/100 (72%)
Frame = +1
Query: 409 DEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRFPCFKS 588
+ V+E+V F+TS DRN++SLVC+SW+++E +R VFIGNCYS+ P RL+ RF +S
Sbjct: 56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115
Query: 589 LTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
L LKGKP FADFNL+P WG PW+ A A++ LE++
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKV 155
>TAIR9_protein||AT4G24390.1 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 624
Score = 119 bits (297), Expect = 3e-027
Identities = 52/100 (52%), Positives = 72/100 (72%)
Frame = +1
Query: 409 DEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRFPCFKS 588
+ V+E+V F+TS DRN++SLVC+SW+++E +R VFIGNCYS+ P RL+ RF +S
Sbjct: 56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115
Query: 589 LTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
L LKGKP FADFNL+P WG PW+ A A++ LE++
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKV 155
>TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5);
ubiquitin-protein ligase | chr5:20334420-20336531 REVERSE
Length = 620
Score = 114 bits (285), Expect = 6e-026
Identities = 53/106 (50%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
Frame = +1
Query: 403 FPDEVIEHVFD----FVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRR 570
FPD V+E+V + F+ S DRN+ SLVCKSW+++E +R VFIGNCY++ P RL +R
Sbjct: 50 FPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQR 109
Query: 571 FPCFKSLTLKGKPHFADFNLVPHGWGGFVQPWIEALARSRVGLEEL 708
F +SL LKGKP FADFNL+P WG PW+ +A++ LE++
Sbjct: 110 FKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKV 155
>TAIR9_protein||AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1);
protein binding / ubiquitin-protein ligase | chr2:16672848-16675486
REVERSE
Length = 593
Score = 110 bits (273), Expect = 2e-024
Identities = 47/93 (50%), Positives = 66/93 (70%)
Frame = +1
Query: 409 DEVIEHVFDFVTSHKDRNSISLVCKSWFKIERYSRQNVFIGNCYSIIPERLLRRFPCFKS 588
D+VIE V ++T KDR+S SLVC+ WFKI+ +R++V + CY+ P+RL RRFP +S
Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77
Query: 589 LTLKGKPHFADFNLVPHGWGGFVQPWIEALARS 687
L LKGKP A FNL+P WGG+V PW+ ++ +
Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNN 110
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,083,343,771
Number of Sequences: 33410
Number of Extensions: 31083343771
Number of Successful Extensions: 1049125688
Number of sequences better than 0.0: 0
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