BLASTX 7.6.2
Query= UN71042 /QuerySize=726
(725 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G02990.1 | Symbols: | mitochondrial transcrip... 305 2e-083
TAIR9_protein||AT2G44020.1 | Symbols: | mitochondrial transcrip... 130 1e-030
TAIR9_protein||AT2G21710.1 | Symbols: EMB2219 | EMB2219 (embryo ... 85 5e-017
TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcrip... 73 2e-013
TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcrip... 62 2e-010
TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcrip... 54 1e-007
TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcrip... 54 1e-007
TAIR9_protein||AT5G54180.1 | Symbols: PTAC15 | PTAC15 (PLASTID T... 50 2e-006
>TAIR9_protein||AT4G02990.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr4:1322158-1323783 FORWARD
Length = 542
Score = 305 bits (781), Expect = 2e-083
Identities = 147/169 (86%), Positives = 161/169 (95%), Gaps = 2/169 (1%)
Frame = -2
Query: 724 DLGSLVERMPQFVSLSESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNIGIMKLSFE 545
DLGSL+ERMPQFVSLSESPML+HI FL +CGFS+DQTREMVIGCPQVLALN+GIMKLSFE
Sbjct: 376 DLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFE 435
Query: 544 FFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMS 365
+F KEM+RPLQDLVDFPAFFTYGLESTVKPRHK++ KKGIKCSLAWMLNCS+EKFEQRMS
Sbjct: 436 YFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRMS 495
Query: 364 YDTIDIEEVESGPASFDMSTLMQPEREEEEESDSEYEEEEDDEDEEFA* 218
YDTIDIEEVE+ P+SFDM+TLMQPER EEESDSEYEEEEDD+DEEFA*
Sbjct: 496 YDTIDIEEVETDPSSFDMNTLMQPER--EEESDSEYEEEEDDDDEEFA* 542
>TAIR9_protein||AT2G44020.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:18217737-18219260
REVERSE
Length = 508
Score = 130 bits (325), Expect = 1e-030
Identities = 66/157 (42%), Positives = 104/157 (66%), Gaps = 9/157 (5%)
Frame = -2
Query: 712 LVERMPQFVSLSESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNIGIMKLSFEFFLK 533
+VE+MPQ VSL ++ +++ I FL F V+ +MV+ CPQ+L + +MK S+ F+
Sbjct: 345 VVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFYKT 404
Query: 532 EMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMSYDTI 353
EM RP+++LV++P +FTY LES +KPR++++ KGI+ SL W LNCS+++FE+R+ + I
Sbjct: 405 EMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFI 464
Query: 352 DIEEVESGPASFDMSTLMQ------PEREEEEESDSE 260
D + GP +FDM ++ EEE+ESD E
Sbjct: 465 DPD--TEGP-TFDMGGKLEMPGGEIVTDEEEDESDDE 498
>TAIR9_protein||AT2G21710.1 | Symbols: EMB2219 | EMB2219 (embryo defective 2219)
| chr2:9270886-9273307 FORWARD
Length = 642
Score = 85 bits (208), Expect = 5e-017
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = -2
Query: 721 LGSLVERMPQFVSLSESPMLE-HIAFLKECGFSVDQTREMVIGCPQVLALNIGIMKLSFE 545
+G ++ P + S LE ++ + G Q EM+ P +L N+ ++ +
Sbjct: 478 IGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYR 537
Query: 544 FFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMS 365
+ + M RPLQDL++FP FF+Y LE + PRH + + + L +ML C++E+FE+R+
Sbjct: 538 YLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVR 597
Query: 364 YDTIDIEEVESGPASFDMSTLMQPEREEEEESDSEYEEEED 242
E E+G S D + ++E E EEEED
Sbjct: 598 DKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEEEED 638
>TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:14577196-14578203
FORWARD
Length = 304
Score = 73 bits (177), Expect = 2e-013
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = -2
Query: 688 VSLSESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNI-GIMKLSFEFFLKEMRRPLQ 512
VS E ++ + FL+ GFS + M++ CP + +I K ++F+ E++ L+
Sbjct: 187 VSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLE 246
Query: 511 DLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMS 365
+L +FP +F + LE +KPRH ++G++ L+ ML ++E+FEQ ++
Sbjct: 247 NLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLLT 295
>TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:900094-900945
REVERSE
Length = 284
Score = 62 bits (150), Expect = 2e-010
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = -2
Query: 688 VSLSESPMLEHIAFLKE-CGFSVDQTREMVIGCPQVLALNI-GIMKLSFEFFLKEMRRPL 515
VS E ++ I +L+E GF+ ++ +MV+ P +L ++ + EFF++EMR +
Sbjct: 164 VSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDV 223
Query: 514 QDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKF 380
++L FP +F++ LE +KPRH+ + + GI L+ ML S+ +F
Sbjct: 224 KELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268
>TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118182
FORWARD
Length = 334
Score = 54 bits (127), Expect = 1e-007
Identities = 29/111 (26%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Frame = -2
Query: 676 ESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNIG-IMKLSFEFFLKEMRRPLQDLVD 500
++ ++ I + ++ GFS M PQ+ +I + ++ + EM R ++++++
Sbjct: 208 DNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLE 267
Query: 499 FPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMSYDTIDI 347
FP +F++ LE+ +KPRH+ KG++ L ML +E F DT+++
Sbjct: 268 FPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFR-----DTLEV 313
>TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118333
FORWARD
Length = 319
Score = 54 bits (127), Expect = 1e-007
Identities = 29/111 (26%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Frame = -2
Query: 676 ESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNIG-IMKLSFEFFLKEMRRPLQDLVD 500
++ ++ I + ++ GFS M PQ+ +I + ++ + EM R ++++++
Sbjct: 208 DNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLE 267
Query: 499 FPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRMSYDTIDI 347
FP +F++ LE+ +KPRH+ KG++ L ML +E F DT+++
Sbjct: 268 FPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFR-----DTLEV 313
>TAIR9_protein||AT5G54180.1 | Symbols: PTAC15 | PTAC15 (PLASTID
TRANSCRIPTIONALLY ACTIVE15) | chr5:21988544-21990183 FORWARD
Length = 501
Score = 50 bits (117), Expect = 2e-006
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = -2
Query: 679 SESPMLEHIAFLKECGFSVDQTREMVIGCPQVLALNIGIMKLSFEFFLKEMRRPLQDLVD 500
S M I G S + M PQVL N ++ E+ ++ M R +++L+
Sbjct: 388 SSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLA 447
Query: 499 FPAFFTYGLESTVKPRHKRVFK-KGIKCSLAWMLNCSEEKFEQ 374
FPAF Y L+S +K R++ K +G SL +L S E+F +
Sbjct: 448 FPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSK 490
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,261,562,835
Number of Sequences: 33410
Number of Extensions: 31261562835
Number of Successful Extensions: 1054795508
Number of sequences better than 0.0: 0
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