BLASTX 7.6.2
Query= UN71295 /QuerySize=638
(637 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular... 293 7e-080
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 270 6e-073
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 158 3e-039
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 69 2e-012
>TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA
protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G65180.1); Has 4531 Blast hits to 4161 proteins in 412
species: Archae - 14; Bacteria - 404; Metazoa - 1999; Fungi - 666;
Plants - 262; Viruses - 36; Other Eukaryotes - 1150 (source: NCBI
BLink). | chr5:3145994-3148049 REVERSE
Length = 470
Score = 293 bits (749), Expect = 7e-080
Identities = 148/176 (84%), Positives = 164/176 (93%), Gaps = 2/176 (1%)
Frame = +2
Query: 113 MSSVFSEEILIDKLAKLNSTRQSIETLSHWCIFNRVKAEFIVTTWEKQFHSTEMAQKVPL 292
MSSVFS++ILIDKLAKLNS++QSIETLSHWCIFNR KAE IVTTWEKQFHSTEM QKVPL
Sbjct: 1 MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60
Query: 293 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKMFG 472
LYLANDILQNSKRQGNEFV EFWNVLPKA+KDI VSQGDD GK V+R++KIWEER++FG
Sbjct: 61 LYLANDILQNSKRQGNEFVQEFWNVLPKALKDI-VSQGDDNGKSAVARVIKIWEERRVFG 119
Query: 473 SRSKNLRDLMLGEDCPLPLDVTNKRSRGSKSSKRDSKSSRTKL-SSGGVAEKIASA 637
SRSK+L+D+MLGED PLPLD++ KR RGSKSSKR+SKSSRTKL SSGGVAEKIASA
Sbjct: 120 SRSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVAEKIASA 175
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 270 bits (689), Expect = 6e-073
Identities = 136/175 (77%), Positives = 155/175 (88%), Gaps = 1/175 (0%)
Frame = +2
Query: 113 MSSVFSEEILIDKLAKLNSTRQSIETLSHWCIFNRVKAEFIVTTWEKQFHSTEMAQKVPL 292
MSS FSEEILID LAKLNST+QSI+TLS WCI +R +AE +VTTWEKQFHST++ QKVPL
Sbjct: 1 MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60
Query: 293 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKMFG 472
LYLANDILQNSKRQGNEFV EFW VLP A+KDI VS GDD GKGVVSRLV IWEER++FG
Sbjct: 61 LYLANDILQNSKRQGNEFVQEFWKVLPGALKDI-VSLGDDYGKGVVSRLVNIWEERRVFG 119
Query: 473 SRSKNLRDLMLGEDCPLPLDVTNKRSRGSKSSKRDSKSSRTKLSSGGVAEKIASA 637
SRSK+L+D+ML E+ P PLDV+ KR RGSKS+KRDSKS++TKLSSGGV+EKI SA
Sbjct: 120 SRSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSA 174
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 158 bits (398), Expect = 3e-039
Identities = 75/132 (56%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Frame = +2
Query: 113 MSSVFSEEILIDKLAKLNSTRQSIETLSHWCIFNRVKAEFIVTTWEKQFHSTEMAQKVPL 292
M S F+ +IL++KLAKLN+++ SIETLSHWCIF+ KA+ +V TW +QFH Q++
Sbjct: 1 MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60
Query: 293 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKMFG 472
LYLANDILQNS+R+G+EFV EFW VLP A++D+ + GDD G+ RLV IWEERK+FG
Sbjct: 61 LYLANDILQNSRRKGSEFVGEFWKVLPDALRDM-IENGDDFGRKSARRLVNIWEERKVFG 119
Query: 473 SRSKNLRDLMLG 508
SR + L++ +LG
Sbjct: 120 SRGQILKEELLG 131
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 69 bits (168), Expect = 2e-012
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +2
Query: 500 MLGEDCPLPLDVTNKRSRGSKSSKRDSKSSRTKLSSGGVAEKIASA 637
ML E+ P PLDV+ KR RGSKS+KRDSKS++TKLSSGGV+EKI SA
Sbjct: 1 MLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSA 46
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,303,455,352
Number of Sequences: 33410
Number of Extensions: 31303455352
Number of Successful Extensions: 1054817717
Number of sequences better than 0.0: 0
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