BLASTX 7.6.2
Query= UN71629 /QuerySize=689
(688 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G11970.1 | Symbols: | YT521-B-like family pro... 107 1e-023
TAIR9_protein||AT4G11970.2 | Symbols: | YT521-B-like family pro... 107 1e-023
TAIR9_protein||AT1G30460.1 | Symbols: CPSF30, ATCPSF30 | CPSF30;... 47 1e-005
>TAIR9_protein||AT4G11970.1 | Symbols: | YT521-B-like family protein |
chr4:7181223-7182953 FORWARD
Length = 445
Score = 107 bits (265), Expect = 1e-023
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
Frame = +2
Query: 263 DDPDYRGKEDRKPS--NVERGHF---LESWNESKKSKPGYQTRYFIIKSLNYDNIQLSLE 427
+ YR KED K S +V+R +F LES +K SKPGY+TRYFIIKSLNYDNIQ+S+E
Sbjct: 31 ESTSYRSKEDHKLSKVDVDRRNFPDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVE 90
Query: 428 RGIWATQVMNEPILEGAFHVRATSLLLY 511
+GIWATQVMNEPILEGAFH +L++
Sbjct: 91 KGIWATQVMNEPILEGAFHKSGRVILIF 118
Score = 71 bits (173), Expect = 5e-013
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 585 SGRVVLIFSVNMSGFFQGYAQMLSPVGWRRDHIW 686
SGRV+LIFSVNMSGFFQGYA+MLSPVGWRRD IW
Sbjct: 111 SGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIW 144
Score = 68 bits (164), Expect = 5e-012
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 185 SDTTAKENVSVVDSSLTDWKQDLGHSDDPD---YRGKEDRKPS--NVERGHFLESWNESK 349
S TAKEN SVVDSSLTDWKQDLG+SDDP+ YR KED K S +V+R +F + +K
Sbjct: 2 SSDTAKENASVVDSSLTDWKQDLGNSDDPESTSYRSKEDHKLSKVDVDRRNFPDQLESAK 61
Query: 350 KSK 358
+K
Sbjct: 62 ANK 64
>TAIR9_protein||AT4G11970.2 | Symbols: | YT521-B-like family protein |
chr4:7181223-7183265 FORWARD
Length = 360
Score = 107 bits (265), Expect = 1e-023
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
Frame = +2
Query: 263 DDPDYRGKEDRKPS--NVERGHF---LESWNESKKSKPGYQTRYFIIKSLNYDNIQLSLE 427
+ YR KED K S +V+R +F LES +K SKPGY+TRYFIIKSLNYDNIQ+S+E
Sbjct: 31 ESTSYRSKEDHKLSKVDVDRRNFPDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVE 90
Query: 428 RGIWATQVMNEPILEGAFHVRATSLLLY 511
+GIWATQVMNEPILEGAFH +L++
Sbjct: 91 KGIWATQVMNEPILEGAFHKSGRVILIF 118
Score = 71 bits (173), Expect = 5e-013
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 585 SGRVVLIFSVNMSGFFQGYAQMLSPVGWRRDHIW 686
SGRV+LIFSVNMSGFFQGYA+MLSPVGWRRD IW
Sbjct: 111 SGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIW 144
Score = 68 bits (164), Expect = 5e-012
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 185 SDTTAKENVSVVDSSLTDWKQDLGHSDDPD---YRGKEDRKPS--NVERGHFLESWNESK 349
S TAKEN SVVDSSLTDWKQDLG+SDDP+ YR KED K S +V+R +F + +K
Sbjct: 2 SSDTAKENASVVDSSLTDWKQDLGNSDDPESTSYRSKEDHKLSKVDVDRRNFPDQLESAK 61
Query: 350 KSK 358
+K
Sbjct: 62 ANK 64
>TAIR9_protein||AT1G30460.1 | Symbols: CPSF30, ATCPSF30 | CPSF30; RNA binding /
calmodulin binding / endonuclease/ nucleic acid binding / protein
binding | chr1:10771469-10775323 REVERSE
Length = 632
Score = 47 bits (110), Expect = 1e-005
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 338 NESKKSKPGYQTRYFIIKSLNYDNIQLSLERGIWATQVMNEPILEGAFHVRATSLLLY 511
N + P RYF++KS N +N +LS+++G+WATQ NE L AF +L++
Sbjct: 226 NRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 283
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,386,010,361
Number of Sequences: 33410
Number of Extensions: 31386010361
Number of Successful Extensions: 1054851617
Number of sequences better than 0.0: 0
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