BLASTX 7.6.2
Query= UN71802 /QuerySize=777
(776 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein w... 220 8e-058
TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein w... 220 8e-058
TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein w... 220 8e-058
TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION... 108 6e-024
TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATIO... 92 3e-019
TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION... 89 3e-018
TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALI... 79 2e-015
>TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14789103 REVERSE
Length = 686
Score = 220 bits (560), Expect = 8e-058
Identities = 115/185 (62%), Positives = 135/185 (72%), Gaps = 4/185 (2%)
Frame = -1
Query: 746 NLLQNNNKQDSSVVETEKNVEGSVLLDEEEAPVPVTTTNLVSNRNSSDASLPITPFRSDQ 567
+++Q + V+ ++ E + E E PV VTT +LV NRNSSDASLPITPFRSD+
Sbjct: 503 DIVQIEKDVEQIVLLDDEEQEAVLDKTESETPVVVTTKSLVGNRNSSDASLPITPFRSDE 562
Query: 566 TKNRQARNGKPVKE---NGDHHSANGGSDTGFKHCVSVIRQLESLGHIDKEFRQKFLTWY 396
KNRQAR +K+ NGD HSANGG+++G +HCV +IRQLE GHIDK FRQKFLTWY
Sbjct: 563 IKNRQARIEISMKDNCNNGD-HSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWY 621
Query: 395 GLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKRCFAVGGGASAVVKSGFCM 216
LRAT QE+RVVKIFIDTF DDPM LAEQL+ TF+D V KR G GASAVV SGFCM
Sbjct: 622 SLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCM 681
Query: 215 KLWH* 201
KLWH*
Sbjct: 682 KLWH* 686
>TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 703
Score = 220 bits (560), Expect = 8e-058
Identities = 115/185 (62%), Positives = 135/185 (72%), Gaps = 4/185 (2%)
Frame = -1
Query: 746 NLLQNNNKQDSSVVETEKNVEGSVLLDEEEAPVPVTTTNLVSNRNSSDASLPITPFRSDQ 567
+++Q + V+ ++ E + E E PV VTT +LV NRNSSDASLPITPFRSD+
Sbjct: 520 DIVQIEKDVEQIVLLDDEEQEAVLDKTESETPVVVTTKSLVGNRNSSDASLPITPFRSDE 579
Query: 566 TKNRQARNGKPVKE---NGDHHSANGGSDTGFKHCVSVIRQLESLGHIDKEFRQKFLTWY 396
KNRQAR +K+ NGD HSANGG+++G +HCV +IRQLE GHIDK FRQKFLTWY
Sbjct: 580 IKNRQARIEISMKDNCNNGD-HSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWY 638
Query: 395 GLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKRCFAVGGGASAVVKSGFCM 216
LRAT QE+RVVKIFIDTF DDPM LAEQL+ TF+D V KR G GASAVV SGFCM
Sbjct: 639 SLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCM 698
Query: 215 KLWH* 201
KLWH*
Sbjct: 699 KLWH* 703
>TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 715
Score = 220 bits (560), Expect = 8e-058
Identities = 115/185 (62%), Positives = 135/185 (72%), Gaps = 4/185 (2%)
Frame = -1
Query: 746 NLLQNNNKQDSSVVETEKNVEGSVLLDEEEAPVPVTTTNLVSNRNSSDASLPITPFRSDQ 567
+++Q + V+ ++ E + E E PV VTT +LV NRNSSDASLPITPFRSD+
Sbjct: 532 DIVQIEKDVEQIVLLDDEEQEAVLDKTESETPVVVTTKSLVGNRNSSDASLPITPFRSDE 591
Query: 566 TKNRQARNGKPVKE---NGDHHSANGGSDTGFKHCVSVIRQLESLGHIDKEFRQKFLTWY 396
KNRQAR +K+ NGD HSANGG+++G +HCV +IRQLE GHIDK FRQKFLTWY
Sbjct: 592 IKNRQARIEISMKDNCNNGD-HSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWY 650
Query: 395 GLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKRCFAVGGGASAVVKSGFCM 216
LRAT QE+RVVKIFIDTF DDPM LAEQL+ TF+D V KR G GASAVV SGFCM
Sbjct: 651 SLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCM 710
Query: 215 KLWH* 201
KLWH*
Sbjct: 711 KLWH* 715
>TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION INSENSITIVE
3); protein binding / zinc ion binding | chr5:23246538-23249289
REVERSE
Length = 621
Score = 108 bits (268), Expect = 6e-024
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Frame = -1
Query: 752 PQNLLQNNNKQDSSVVETEKNVE----GSVLLDEEEAPVPVTTTNLVSNRNSSDASLPIT 585
P++ N NK S + N E G V + EE + N + R+ L +T
Sbjct: 437 PEDESNNVNKSCSKGNGDKDNTEHCSAGEVESELEEERLVKRKANKIDGRD-----LLVT 491
Query: 584 PFRSDQTKNRQARN----GKPVKENGD---HHSANGGSDTGFKHCVSVIRQLESLGHIDK 426
P + D K +Q N + V N +++ANG D H V IR LE GHIDK
Sbjct: 492 PCKRDIYKGKQGGNKRFKSRTVSLNEKPEINNAANGVGDKDLGHIVKTIRCLEEEGHIDK 551
Query: 425 EFRQKFLTWYGLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKRCFAVGGGA 246
FR++FLTWY LRAT +EVRVVKIF++TF +D L +QLV TF++ +L+KR
Sbjct: 552 SFRERFLTWYSLRATHREVRVVKIFVETFMEDLSSLGQQLVDTFSESILSKR-----SST 606
Query: 245 SAVVKSGFCM 216
+ VV +G C+
Sbjct: 607 NGVVPAGICL 616
>TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATION5/VIN3-LIKE))
| chr2:8176386-8178788 FORWARD
Length = 530
Score = 92 bits (227), Expect = 3e-019
Identities = 46/97 (47%), Positives = 62/97 (63%)
Frame = -1
Query: 524 NGDHHSANGGSDTGFKHCVSVIRQLESLGHIDKEFRQKFLTWYGLRATPQEVRVVKIFID 345
N + +G GF+ CV++IRQLE G + +FR+KFLTWY L+AT +E VV+IF+D
Sbjct: 426 NANKMEKSGSCSFGFEECVNLIRQLECSGQVKSDFRKKFLTWYCLKATDKEKHVVEIFVD 485
Query: 344 TFSDDPMDLAEQLVHTFNDHVLAKRCFAVGGGASAVV 234
TF DD LA+QL+ TF+D + K GG SA V
Sbjct: 486 TFKDDKEALAKQLIDTFSDCITRKHPEIGGGSESAGV 522
>TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION5/VIN3-LIKE) |
chr2:8167471-8168668 FORWARD
Length = 240
Score = 89 bits (219), Expect = 3e-018
Identities = 53/122 (43%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Frame = -1
Query: 590 ITP-FRSDQTKNRQARNGKPVKENGDHHSANGGSDTGFKHCVSVIRQLESLGHIDKEFRQ 414
+TP F SDQ Q + K K+N + + G + CV +IR+LE G+++ FRQ
Sbjct: 114 VTPQFMSDQINGHQDKPEK-AKKNPESYG------LGLEQCVKIIRKLECSGYVESTFRQ 166
Query: 413 KFLTWYGLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKRCF---AVGGGAS 243
KFLTW+ LRAT QE V F++ F+DD M LAEQLV TF+D + +K GGG+S
Sbjct: 167 KFLTWFSLRATSQERNTVTTFMNAFNDDSMALAEQLVDTFSDCIWSKGSVIGDRDGGGSS 226
Query: 242 AV 237
V
Sbjct: 227 GV 228
>TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) |
chr3:8876207-8878171 REVERSE
Length = 603
Score = 79 bits (194), Expect = 2e-015
Identities = 48/113 (42%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = -1
Query: 608 SDASLPITPFRSDQTKNRQARNGKPVKENGDHHSANGGSDTGFKHCVSVIRQLESLGHID 429
SD S T F T+ R+A + EN H + D + CV VIR LE GHI
Sbjct: 483 SDGSGDDTGFDFLMTRKRKAISDSNDSEN--HECDSSSIDDTLEKCVKVIRWLEREGHIK 540
Query: 428 KEFRQKFLTWYGLRATPQEVRVVKIFIDTFSDDPMDLAEQLVHTFNDHVLAKR 270
FR +FLTW+ + +T QE VV F+ T DDP LA QLV F D V KR
Sbjct: 541 TTFRVRFLTWFSMSSTAQEQSVVSTFVQTLEDDPGSLAGQLVDAFTDVVSTKR 593
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,479,035,804
Number of Sequences: 33410
Number of Extensions: 31479035804
Number of Successful Extensions: 1060355620
Number of sequences better than 0.0: 0
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