BLASTX 7.6.2
Query= UN72003 /QuerySize=523
(522 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70200.1 | Symbols: | RNA recognition motif (... 141 4e-034
>TAIR9_protein||AT1G70200.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:26432514-26434351 REVERSE
Length = 539
Score = 141 bits (353), Expect = 4e-034
Identities = 80/134 (59%), Positives = 96/134 (71%), Gaps = 14/134 (10%)
Frame = +2
Query: 44 LCNSLLLHSRFKSP-RSIPSSSSPSLISPCFTTSAHISLP-------RAVVVKRSDGFRS 199
LCNS+LLHS S +S SS S LIS TTS +IS+ R V+ KRS+GF S
Sbjct: 6 LCNSVLLHSHSLSRFQSSSSSCSVYLISSARTTSKYISISHRIRQSFREVIEKRSNGFCS 65
Query: 200 LAVNKRRSSTE---EDVEEEEEDDEDWGEFEGD---EDEDEYEGEFLPMDKMKRWLEKKP 361
AVNKRRS E +++EEDDEDWGEF+G+ E+E+E EGEFLPMDKMK+WLEKKP
Sbjct: 66 FAVNKRRSGDSVIVESDDDDEEDDEDWGEFDGEDEGEEEEEDEGEFLPMDKMKKWLEKKP 125
Query: 362 RGFGVGKKYETLIK 403
RGFG+GKKYETLI+
Sbjct: 126 RGFGLGKKYETLIE 139
Score = 56 bits (134), Expect = 1e-008
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +1
Query: 379 QKVRDFDKDKLLEEIEQSWKAQAANLNNLKTNDPLKRYHNNNNNNLIK 522
+K +DKLL+EIEQSWKAQAANLN LK NDPLK ++NL+K
Sbjct: 132 KKYETLIEDKLLDEIEQSWKAQAANLNKLK-NDPLKSQQLKRDDNLLK 178
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,524,294,436
Number of Sequences: 33410
Number of Extensions: 31524294436
Number of Successful Extensions: 1060456713
Number of sequences better than 0.0: 0
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