BLASTX 7.6.2
Query= UN72095 /QuerySize=693
(692 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcrip... 127 7e-030
TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcrip... 66 2e-011
TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcrip... 56 2e-008
TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcrip... 56 2e-008
TAIR9_protein||AT3G18870.1 | Symbols: | mitochondrial transcrip... 51 7e-007
TAIR9_protein||AT1G78930.1 | Symbols: | mitochondrial transcrip... 49 2e-006
>TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:900094-900945
REVERSE
Length = 284
Score = 127 bits (318), Expect = 7e-030
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +2
Query: 2 FMEEIRGDVGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNLWLVG 181
F+EE+RGDV ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFN WL+
Sbjct: 215 FIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWLLE 274
Query: 182 LRLRSVERR 208
LRLRS ERR
Sbjct: 275 LRLRSAERR 283
>TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:14577196-14578203
FORWARD
Length = 304
Score = 66 bits (160), Expect = 2e-011
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +2
Query: 2 FMEEIRGDVGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 163
FM EI+G + LK FPQYF+FSLE++IKPRH E G+ +PLS MLK +D +F
Sbjct: 237 FMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEF 290
>TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118182
FORWARD
Length = 334
Score = 56 bits (133), Expect = 2e-008
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +2
Query: 5 MEEIRGDVGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 163
M E+ DV E+ FPQYFSFSLE +IKPRH G+ PL MLK ++ F
Sbjct: 255 MVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307
>TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118333
FORWARD
Length = 319
Score = 56 bits (133), Expect = 2e-008
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +2
Query: 5 MEEIRGDVGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 163
M E+ DV E+ FPQYFSFSLE +IKPRH G+ PL MLK ++ F
Sbjct: 255 MVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307
>TAIR9_protein||AT3G18870.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr3:6508515-6509339
REVERSE
Length = 275
Score = 51 bits (120), Expect = 7e-007
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2
Query: 11 EIRGDVGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 163
++ ++ ELK+FPQYF+FSL ++I+PRH LK+ + + LS ML D +F
Sbjct: 218 DMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKF 268
>TAIR9_protein||AT1G78930.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:29678285-29680648
REVERSE
Length = 592
Score = 49 bits (116), Expect = 2e-006
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +2
Query: 26 VGELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNLWLVGL 184
V E+ +P+YFS+SLE++IKPR R+LK I L EML +D +F +GL
Sbjct: 529 VREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEFAADFLGL 581
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,568,477,377
Number of Sequences: 33410
Number of Extensions: 31568477377
Number of Successful Extensions: 1060516001
Number of sequences better than 0.0: 0
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