BLASTX 7.6.2
Query= UN72100 /QuerySize=609
(608 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297823693|ref|XP_002879729.1| plastid-specific ribosomal prot... 140 1e-031
gi|15224451|ref|NP_181349.1| 30S ribosomal protein S31 [Arabidop... 139 2e-031
gi|225440656|ref|XP_002274396.1| PREDICTED: hypothetical protein... 101 7e-020
gi|255581061|ref|XP_002531346.1| structural constituent of ribos... 101 1e-019
gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vini... 99 3e-019
gi|147853777|emb|CAN83819.1| hypothetical protein VITISV_030951 ... 99 4e-019
gi|114152868|sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal ... 97 1e-018
gi|224139060|ref|XP_002322970.1| predicted protein [Populus tric... 85 7e-015
gi|242055315|ref|XP_002456803.1| hypothetical protein SORBIDRAFT... 76 3e-012
gi|115462461|ref|NP_001054830.1| Os05g0186000 [Oryza sativa Japo... 75 7e-012
gi|326492922|dbj|BAJ90317.1| predicted protein [Hordeum vulgare ... 73 2e-011
gi|194699530|gb|ACF83849.1| unknown [Zea mays] 72 4e-011
gi|195611084|gb|ACG27372.1| PSRP4 [Zea mays] 72 4e-011
gi|195638986|gb|ACG38961.1| PSRP4 [Zea mays] 72 4e-011
gi|116780769|gb|ABK21808.1| unknown [Picea sitchensis] 72 6e-011
gi|148908044|gb|ABR17141.1| unknown [Picea sitchensis] 72 6e-011
gi|226499608|ref|NP_001148387.1| LOC100282000 [Zea mays] 71 1e-010
gi|116785711|gb|ABK23830.1| unknown [Picea sitchensis] 70 1e-010
gi|300415|gb|AAB26676.1| ribosomal protein S31 [Spinacia olerace... 69 3e-010
>gi|297823693|ref|XP_002879729.1| plastid-specific ribosomal protein 4
[Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 140 bits (352), Expect = 1e-031
Identities = 72/87 (82%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 55 MASLLLGAPPRVTTVPSSPRLSSSHSETLGVSLSRFAQQLSLSASSSSISVPLVYCGRGD 234
MASL+LGAPPRVT SS RLSSSHSET GVSLS Q SLS SSSS S+PLVYCGRGD
Sbjct: 1 MASLILGAPPRVTVALSSSRLSSSHSETAGVSLSCSTHQFSLSTSSSS-SIPLVYCGRGD 59
Query: 235 RKTARGKRFNHSFGNARPRNKNKGRGP 315
RKTA+GKRFNHSFGNARPRNKNKGRGP
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKNKGRGP 86
>gi|15224451|ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
Length = 118
Score = 139 bits (350), Expect = 2e-031
Identities = 71/87 (81%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 55 MASLLLGAPPRVTTVPSSPRLSSSHSETLGVSLSRFAQQLSLSASSSSISVPLVYCGRGD 234
MASL+LGAPPRVT S RLSSSHSET GVSLS F Q SLS SSSS S+PLVYCGRGD
Sbjct: 1 MASLILGAPPRVTVALPSSRLSSSHSETAGVSLSCFTHQFSLSTSSSS-SIPLVYCGRGD 59
Query: 235 RKTARGKRFNHSFGNARPRNKNKGRGP 315
RKTA+GKRFNHSFGNARPRNK+KGRGP
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKSKGRGP 86
Score = 69 bits (166), Expect = 5e-010
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +3
Query: 315 QRVPVPPAPPRKDKFENDEKIKIDIDESLFSN 410
+RVPVPPAPPRKDKFENDEKIKIDIDESLFSN
Sbjct: 87 ERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118
>gi|225440656|ref|XP_002274396.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 160
Score = 101 bits (251), Expect = 7e-020
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Frame = +1
Query: 49 TAMASLLLGAPP-RVTTVPSSPRLSSSHSETLGVSLSRFAQQLSLSASSSSISVPLVYCG 225
+AMA+L+LGAP ++ S R S S SETL VS LS+SA+S +P VYCG
Sbjct: 41 SAMAALILGAPAIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPP-PIPSVYCG 99
Query: 226 RGDRKTARGKRFNHSFGNARPRNKNKGRGP 315
RGD+KTA+GKRFNHSFGNARPRNK KGRGP
Sbjct: 100 RGDKKTAKGKRFNHSFGNARPRNKKKGRGP 129
>gi|255581061|ref|XP_002531346.1| structural constituent of ribosome, putative
[Ricinus communis]
Length = 116
Score = 101 bits (249), Expect = 1e-019
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Frame = +1
Query: 91 TTVPSSP-RLSSSHSETLGVSLSRFAQQLSLSASSSSIS---VPLVYCGRGDRKTARGKR 258
T +P +P RLSSS SE LGV +S SLS S+++ S +P VYCGRGD+KTA+GKR
Sbjct: 8 TALPMTPHRLSSSQSEALGVGISFSYSIPSLSVSTTTASTSPIPFVYCGRGDKKTAKGKR 67
Query: 259 FNHSFGNARPRNKNKGRGP 315
FNHSFGNARPRNKNKGRGP
Sbjct: 68 FNHSFGNARPRNKNKGRGP 86
>gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 99 bits (246), Expect = 3e-019
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = +1
Query: 55 MASLLLGAPP-RVTTVPSSPRLSSSHSETLGVSLSRFAQQLSLSASSSSISVPLVYCGRG 231
MA+L+LGAP ++ S R S S SETL VS LS+SA+S +P VYCGRG
Sbjct: 1 MAALILGAPAIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPP-PIPSVYCGRG 59
Query: 232 DRKTARGKRFNHSFGNARPRNKNKGRGP 315
D+KTA+GKRFNHSFGNARPRNK KGRGP
Sbjct: 60 DKKTAKGKRFNHSFGNARPRNKKKGRGP 87
>gi|147853777|emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis
vinifera]
Length = 117
Score = 99 bits (245), Expect = 4e-019
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Frame = +1
Query: 58 ASLLLGAPP-RVTTVPSSPRLSSSHSETLGVSL-SRFAQQLSLSASSSSISVPLVYCGRG 231
A+L+LGAP ++ S R S S SETL VS +RF +SLS S++S +P VYCGRG
Sbjct: 2 AALILGAPAIAPQSLNLSSRFSFSQSETLAVSFDTRF---VSLSISATSPPIPSVYCGRG 58
Query: 232 DRKTARGKRFNHSFGNARPRNKNKGRGP 315
D+KTA+GKRFNHSFGNARPRNK KGRGP
Sbjct: 59 DKKTAKGKRFNHSFGNARPRNKKKGRGP 86
>gi|114152868|sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal protein S31,
chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
Length = 101
Score = 97 bits (241), Expect = 1e-018
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 6/87 (6%)
Frame = +1
Query: 61 SLLLGAPPRVTTVPSSPRLSSSHSETL-GVSLSRFAQQLSLSAS-SSSISVPLVYCGRGD 234
SLLLG P + S S SHS+++ GVSLS LSLS+S S+S ++PL+YCGRGD
Sbjct: 3 SLLLGTP---SMACHSVSFSFSHSQSVAGVSLSS-PPTLSLSSSVSTSPALPLIYCGRGD 58
Query: 235 RKTARGKRFNHSFGNARPRNKNKGRGP 315
RKTA+GKRFNHSFGNARP+NKNKGRGP
Sbjct: 59 RKTAKGKRFNHSFGNARPKNKNKGRGP 85
>gi|224139060|ref|XP_002322970.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 85 bits (208), Expect = 7e-015
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 12/83 (14%)
Frame = +1
Query: 88 VTTVPSSPRLSSSHSETLGVSLSRFAQQLSLSASSSSI-------SVPLVYCGRGDRKTA 246
V +P +P+ + G LS Q+SL S+SS+ SVP VYCGRGDRKT
Sbjct: 6 VGAIPMTPQ-----ALNFGSRLSYSQSQISLCHSTSSLPLSTARTSVPFVYCGRGDRKTE 60
Query: 247 RGKRFNHSFGNARPRNKNKGRGP 315
RGKRFNHSFGNARPR+K KGRGP
Sbjct: 61 RGKRFNHSFGNARPRDKKKGRGP 83
>gi|242055315|ref|XP_002456803.1| hypothetical protein SORBIDRAFT_03g043130
[Sorghum bicolor]
Length = 130
Score = 76 bits (185), Expect = 3e-012
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 SSSHSETLGVSLSRFAQQLSLSASSSSISVPL--VYCGRGDRKTARGKRFNHSFGNARPR 291
+SS++ T + R ++ A +S+ P+ VYCGRGD+KT RGKRFNHS+GNARPR
Sbjct: 32 TSSYALTASAAFPRVRAAFAVGAVTSAAVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPR 91
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 92 NKKKGTGP 99
>gi|115462461|ref|NP_001054830.1| Os05g0186000 [Oryza sativa Japonica Group]
Length = 126
Score = 75 bits (182), Expect = 7e-012
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Frame = +1
Query: 94 TVPSSPRLSSSHSETLGVSLSRFAQQLS--LSASSSSISVPL-----VYCGRGDRKTARG 252
T PSS ++ S + + F++ S +A+++++S PL VYCGRGD+KT RG
Sbjct: 15 TFPSSHHHAAVSSYCALPAAAAFSRSRSRVAAAAAATLSAPLTPVLEVYCGRGDKKTKRG 74
Query: 253 KRFNHSFGNARPRNKNKGRGP 315
KRFNHS+GNARPRNK KG GP
Sbjct: 75 KRFNHSYGNARPRNKKKGTGP 95
>gi|326492922|dbj|BAJ90317.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 126
Score = 73 bits (178), Expect = 2e-011
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = +1
Query: 121 SSHSETLGVSLSRFAQQLSLSASSSS---ISVPLVYCGRGDRKTARGKRFNHSFGNARPR 291
SS S L ++S SL+A++ S SV VYCGRGDRKT RGKRF+HS+GNARPR
Sbjct: 25 SSFSFGLSATVSFCCSARSLAATAVSAPPTSVLDVYCGRGDRKTKRGKRFSHSYGNARPR 84
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 85 NKKKGTGP 92
>gi|194699530|gb|ACF83849.1| unknown [Zea mays]
Length = 122
Score = 72 bits (176), Expect = 4e-011
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 SSSHSETLGVSLSRFAQQLSLSASSSSISVPL--VYCGRGDRKTARGKRFNHSFGNARPR 291
+SS++ + R ++ A S+ P+ VYCGRGD+KT RGKRFNHS+GNARPR
Sbjct: 24 TSSYALAASAAFPRARAAFAVGAVLSATVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPR 83
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 84 NKKKGTGP 91
>gi|195611084|gb|ACG27372.1| PSRP4 [Zea mays]
Length = 130
Score = 72 bits (176), Expect = 4e-011
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 SSSHSETLGVSLSRFAQQLSLSASSSSISVPL--VYCGRGDRKTARGKRFNHSFGNARPR 291
+SS++ + R ++ A S+ P+ VYCGRGD+KT RGKRFNHS+GNARPR
Sbjct: 32 TSSYALAASAAFPRARAAFAVGAVLSATVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPR 91
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 92 NKKKGTGP 99
>gi|195638986|gb|ACG38961.1| PSRP4 [Zea mays]
Length = 132
Score = 72 bits (176), Expect = 4e-011
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 SSSHSETLGVSLSRFAQQLSLSASSSSISVPL--VYCGRGDRKTARGKRFNHSFGNARPR 291
+SS++ + R ++ A S+ P+ VYCGRGD+KT RGKRFNHS+GNARPR
Sbjct: 32 TSSYALAASAAFPRARAAFAVGAVLSATVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPR 91
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 92 NKKKGTGP 99
>gi|116780769|gb|ABK21808.1| unknown [Picea sitchensis]
Length = 112
Score = 72 bits (174), Expect = 6e-011
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 88 VTTVPSSPRLSSSHSETLGVSLSRFAQQ--LSLSASSSSISVPLVYCGRGDRKTARGKRF 261
+ T P + + HS G LS + ++LS +S P VYCGRGD++TA+GKRF
Sbjct: 4 MATSPMAGQCFLLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRF 63
Query: 262 NHSFGNARPRNKNKGRG 312
HSFGNARPR+ KGRG
Sbjct: 64 KHSFGNARPRDNKKGRG 80
>gi|148908044|gb|ABR17141.1| unknown [Picea sitchensis]
Length = 112
Score = 72 bits (174), Expect = 6e-011
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 88 VTTVPSSPRLSSSHSETLGVSLSRFAQQ--LSLSASSSSISVPLVYCGRGDRKTARGKRF 261
+ T P + + HS G LS + ++LS +S P VYCGRGD++TA+GKRF
Sbjct: 4 MATSPMAGQCFLLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRF 63
Query: 262 NHSFGNARPRNKNKGRG 312
HSFGNARPR+ KGRG
Sbjct: 64 KHSFGNARPRDNKKGRG 80
>gi|226499608|ref|NP_001148387.1| LOC100282000 [Zea mays]
Length = 130
Score = 71 bits (172), Expect = 1e-010
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 SSSHSETLGVSLSRFAQQLSLSASSSSISVPL--VYCGRGDRKTARGKRFNHSFGNARPR 291
+SS++ + R ++ S+ P+ VYCGRGD+KT RGKRFNHS+GNARPR
Sbjct: 32 TSSYALAASAAFPRARAAFAVGTVLSATVTPVLDVYCGRGDKKTKRGKRFNHSYGNARPR 91
Query: 292 NKNKGRGP 315
NK KG GP
Sbjct: 92 NKKKGTGP 99
>gi|116785711|gb|ABK23830.1| unknown [Picea sitchensis]
Length = 112
Score = 70 bits (171), Expect = 1e-010
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +1
Query: 127 HSETLGVSLSRFAQQ--LSLSASSSSISVPLVYCGRGDRKTARGKRFNHSFGNARPRNKN 300
HS G LS + ++LS +S P VYCGRGD++TA+GKRF HSFGNARPR+
Sbjct: 17 HSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRDNK 76
Query: 301 KGRG 312
KGRG
Sbjct: 77 KGRG 80
>gi|300415|gb|AAB26676.1| ribosomal protein S31 [Spinacia oleracea=spinach, cv
Alwaro, leaves, Peptide Chloroplast Partial, 43 aa]
Length = 43
Score = 69 bits (168), Expect = 3e-010
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 223 GRGDRKTARGKRFNHSFGNARPRNKNKGRGPREFLSLLLHRG 348
GRGDRKTA+GKRFNHSFGNARP+NKNKGRGP + +G
Sbjct: 1 GRGDRKTAKGKRFNHSFGNARPKNKNKGRGPXPKAXAIFFKG 42
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 670,546,551,498
Number of Sequences: 15229318
Number of Extensions: 670546551498
Number of Successful Extensions: 203192682
Number of sequences better than 0.0: 0
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