BLASTX 7.6.2
Query= UN72213 /QuerySize=570
(569 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G14530.1 | Symbols: | transducin family prote... 325 2e-089
TAIR9_protein||AT5G66240.1 | Symbols: | transducin family prote... 167 5e-042
TAIR9_protein||AT5G66240.2 | Symbols: | transducin family prote... 167 5e-042
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 55 3e-008
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 54 6e-008
TAIR9_protein||AT5G23430.2 | Symbols: | transducin family prote... 54 6e-008
>TAIR9_protein||AT5G14530.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:4684782-4686865 REVERSE
Length = 331
Score = 325 bits (831), Expect = 2e-089
Identities = 158/163 (96%), Positives = 161/163 (98%)
Frame = +2
Query: 80 MSLTELDDGMVRRMAIGAVFSDFGGKIRSVGFHRTDDLLVTSSEDDSLRLFDIANAKQVK 259
MSLTELDDG+VRRMA+GAVFSDFGGKI SVGFHRTDDLLVTSSEDDSLRLFDIANAKQ+K
Sbjct: 1 MSLTELDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLK 60
Query: 260 ITYHKKHGTDRVCFTHHPSSLICSSLYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSL 439
ITYHKKHGTDRVCFTHHPSSLICSS YNLESTGESLRYLSMYDNRILRYFKGHKDRVVSL
Sbjct: 61 ITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSL 120
Query: 440 CMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD 568
CMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD
Sbjct: 121 CMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD 163
>TAIR9_protein||AT5G66240.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:26466268-26468201 FORWARD
Length = 329
Score = 167 bits (422), Expect = 5e-042
Identities = 82/159 (51%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Frame = +2
Query: 92 ELDDGMVRRMAIGAVFSDFGGKIRSVGFHRTDDLLVTSSEDDSLRLFDIANAKQVKITYH 271
EL + +++ M GAVF D+ +I S+ FH+T +VT+S+DDS+RL+D+A+A +K
Sbjct: 11 ELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINS 70
Query: 272 KKHGTDRVCFTHHPSSLICSSLYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSP 451
KK+G D VCFT HP+++I SS + +SLR LS++DN+ LRYFKGH DRVVSL +
Sbjct: 71 KKYGVDLVCFTSHPTTVIYSSRNGWD---DSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 127
Query: 452 INDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD 568
+ F+SGSLDR+V LWD RV CQG+L ++GRPA AYD
Sbjct: 128 GGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYD 166
>TAIR9_protein||AT5G66240.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:26466348-26468201 FORWARD
Length = 332
Score = 167 bits (422), Expect = 5e-042
Identities = 82/159 (51%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Frame = +2
Query: 92 ELDDGMVRRMAIGAVFSDFGGKIRSVGFHRTDDLLVTSSEDDSLRLFDIANAKQVKITYH 271
EL + +++ M GAVF D+ +I S+ FH+T +VT+S+DDS+RL+D+A+A +K
Sbjct: 14 ELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINS 73
Query: 272 KKHGTDRVCFTHHPSSLICSSLYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSP 451
KK+G D VCFT HP+++I SS + +SLR LS++DN+ LRYFKGH DRVVSL +
Sbjct: 74 KKYGVDLVCFTSHPTTVIYSSRNGWD---DSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 130
Query: 452 INDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD 568
+ F+SGSLDR+V LWD RV CQG+L ++GRPA AYD
Sbjct: 131 GGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYD 169
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 55 bits (130), Expect = 3e-008
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 179 RTDDLLVTSSEDDSLRLFDIANAKQVKITYHKKHGTDRVCFTHHPSSLICSSLYNLESTG 358
++ +LVT ED + L+ I + Y G D V F L +
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD------ASEGLVAAGAAS 80
Query: 359 ESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 523
+++ + + +++R GH+ VS+ P + F SGSLD ++++WD+R C
Sbjct: 81 GTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC 135
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 54 bits (128), Expect = 6e-008
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 179 RTDDLLVTSSEDDSLRLFDIANAKQVKITYHKKHGTDRVCFTHHPSSLICSSLYNLESTG 358
++ +LVT ED + L+ I + Y G D V F L +
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD------ASEVLVAAGAAS 80
Query: 359 ESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 523
+++ + + +I+R GH+ +S+ P + F SGSLD ++++WD+R C
Sbjct: 81 GTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
>TAIR9_protein||AT5G23430.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 54 bits (128), Expect = 6e-008
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 179 RTDDLLVTSSEDDSLRLFDIANAKQVKITYHKKHGTDRVCFTHHPSSLICSSLYNLESTG 358
++ +LVT ED + L+ I + Y G D V F L +
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD------ASEVLVAAGAAS 80
Query: 359 ESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 523
+++ + + +I+R GH+ +S+ P + F SGSLD ++++WD+R C
Sbjct: 81 GTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,568,477,377
Number of Sequences: 33410
Number of Extensions: 31568477377
Number of Successful Extensions: 1060516001
Number of sequences better than 0.0: 0
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