Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN72221


BLASTX 7.6.2

Query= UN72221 /QuerySize=668
        (667 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G09850.1 | Symbols:  | transcription elongatio...    151   3e-037

>TAIR9_protein||AT5G09850.1 | Symbols:  | transcription elongation
        factor-related | chr5:3063488-3065221 REVERSE

          Length = 354

 Score =  151 bits (381), Expect = 3e-037
 Identities = 87/151 (57%), Positives = 107/151 (70%), Gaps = 11/151 (7%)
 Frame = +3

Query: 147 MDLDEFRSIMDNAGVDVWTFIDTAILVASLDYGQELKQRRDNIVERLYATSMANKCRNCD 326
           MDLD+FRS+MDNAGVDVWTFIDTAILVASLDYGQELK+RRDNIVERLYATSMANKCRNCD
Sbjct:   1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60

Query: 327 F---GSVSEAARG-VNGRRVHEEEEVREKSVNGDDEEEEEEEEDPFAGLFDDEQKSILDI 494
           F   G+V+EAA G VN  RVHEE E  E+   G     EEE  +    + DD+     D 
Sbjct:  61 FGGGGNVTEAAIGRVNNGRVHEETE--EEDEEGVTAAAEEEVREKSVNVEDDD-----DF 113

Query: 495 KEKLEEPDLTEEALVELLQNLEDMEITFQAL 587
                  D  ++++VE+ + LED +++ ++L
Sbjct: 114 DPFAGLFDDEQKSIVEIKEKLEDPDLSEESL 144


 Score =  106 bits (264), Expect = 1e-023
 Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 4/70 (5%)
 Frame = +3

Query: 381 EEEVREKSVNGDDEEEEEEEEDPFAGLFDDEQKSILDIKEKLEEPDLTEEALVELLQNLE 560
           EEEVREKSVN     E++++ DPFAGLFDDEQKSI++IKEKLE+PDL+EE+LVELLQNLE
Sbjct:  97 EEEVREKSVN----VEDDDDFDPFAGLFDDEQKSIVEIKEKLEDPDLSEESLVELLQNLE 152

Query: 561 DMEITFQALQ 590
           DM+ITFQALQ
Sbjct: 153 DMDITFQALQ 162

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,568,477,377
Number of Sequences: 33410
Number of Extensions: 31568477377
Number of Successful Extensions: 1060516001
Number of sequences better than 0.0: 0