BLASTX 7.6.2
Query= UN72249 /QuerySize=659
(658 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297829164|ref|XP_002882464.1| hypothetical protein ARALYDRAFT... 126 3e-027
gi|21594296|gb|AAM65991.1| unknown [Arabidopsis thaliana] 80 2e-013
gi|145331984|ref|NP_001078114.1| RING/U-box domain-containing pr... 80 2e-013
gi|18397535|ref|NP_566281.1| RING/U-box domain-containing protei... 80 2e-013
gi|30686985|ref|NP_197377.2| RING/U-box domain-containing protei... 59 6e-007
gi|26452687|dbj|BAC43426.1| unknown protein [Arabidopsis thaliana] 57 2e-006
gi|297812061|ref|XP_002873914.1| zinc finger family protein [Ara... 57 2e-006
>gi|297829164|ref|XP_002882464.1| hypothetical protein ARALYDRAFT_477933
[Arabidopsis lyrata subsp. lyrata]
Length = 430
Score = 126 bits (315), Expect = 3e-027
Identities = 76/109 (69%), Positives = 84/109 (77%), Gaps = 8/109 (7%)
Frame = +1
Query: 106 MKQEDSASEHPEVAIVLGDSSSSSSSPPPPPPSQVKEKPTEDVHSSQPSGGTHSDLSIQI 285
MK +DSA++ PE+AI++GDSSSSSS QVKEK TEDV SSQ S TH DLSIQI
Sbjct: 1 MKMQDSAAQQPEIAIIVGDSSSSSSQ----VDHQVKEKSTEDVPSSQ-SIETHLDLSIQI 55
Query: 286 PPRPIPFPGGGSRIPKGSLKSTSSFKSGGTTSSPRGILRNLSLKKKAVS 432
P RPIPF G R PK SLKSTSSFKS G+TSSPRGILRNLSLKKK +S
Sbjct: 56 PLRPIPF--GNGRNPKSSLKSTSSFKS-GSTSSPRGILRNLSLKKKVIS 101
Score = 78 bits (190), Expect = 1e-012
Identities = 47/72 (65%), Positives = 49/72 (68%), Gaps = 9/72 (12%)
Frame = +2
Query: 443 ETAKKTNNNPPGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPKKDSIRPP 622
ETAKK N GS A SPYW+RCLSLP+R AKLSPVV VS VPGEP KD
Sbjct: 117 ETAKKP--NAAGSTA-SPYWKRCLSLPNRHAAKLSPVV-STQVSAGVPGEPRNKD----- 167
Query: 623 VPRSLSMPGRNK 658
PRSLSMPGRNK
Sbjct: 168 YPRSLSMPGRNK 179
>gi|21594296|gb|AAM65991.1| unknown [Arabidopsis thaliana]
Length = 424
Score = 80 bits (197), Expect = 2e-013
Identities = 44/58 (75%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
Frame = +1
Query: 259 THSDLSIQIPPRPIPFPGGGSRIPKGSLKSTSSFKSGGTTSSPRGILRNLSLKKKAVS 432
+H DLSIQIP R +PF G R PKGSLKST+SFKS GTTSSPRGILRNLSLKKK +S
Sbjct: 41 SHLDLSIQIPSRSLPF--GNGRNPKGSLKSTTSFKS-GTTSSPRGILRNLSLKKKVIS 95
Score = 80 bits (196), Expect = 2e-013
Identities = 45/72 (62%), Positives = 49/72 (68%), Gaps = 9/72 (12%)
Frame = +2
Query: 443 ETAKKTNNNPPGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPKKDSIRPP 622
ETAKK N + TSPYW+RCLSLPSRQ AKLSPVV +S VPG+PP KD
Sbjct: 111 ETAKKPNAT---GSTTSPYWKRCLSLPSRQAAKLSPVV-STQLSAGVPGDPPNKD----- 161
Query: 623 VPRSLSMPGRNK 658
RSLSMPGRNK
Sbjct: 162 YSRSLSMPGRNK 173
>gi|145331984|ref|NP_001078114.1| RING/U-box domain-containing protein
[Arabidopsis thaliana]
Length = 363
Score = 80 bits (196), Expect = 2e-013
Identities = 45/72 (62%), Positives = 49/72 (68%), Gaps = 9/72 (12%)
Frame = +2
Query: 443 ETAKKTNNNPPGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPKKDSIRPP 622
ETAKK N + TSPYW+RCLSLPSRQ AKLSPVV +S VPG+PP KD
Sbjct: 113 ETAKKPNAT---GSTTSPYWKRCLSLPSRQAAKLSPVV-STQLSAGVPGDPPNKD----- 163
Query: 623 VPRSLSMPGRNK 658
RSLSMPGRNK
Sbjct: 164 YSRSLSMPGRNK 175
Score = 80 bits (195), Expect = 3e-013
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 259 THSDLSIQIPPRPIPFPGGGSRIPKGSLKSTSSFKSGGTTSSPRGILRNLSLKKKAVS 432
+H DLSIQIP R +PF G R PKGSLKST SFKS GTTSSPRGILRNLSLKKK +S
Sbjct: 43 SHLDLSIQIPSRSLPF--GNGRNPKGSLKSTPSFKS-GTTSSPRGILRNLSLKKKVIS 97
>gi|18397535|ref|NP_566281.1| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 426
Score = 80 bits (196), Expect = 2e-013
Identities = 45/72 (62%), Positives = 49/72 (68%), Gaps = 9/72 (12%)
Frame = +2
Query: 443 ETAKKTNNNPPGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPKKDSIRPP 622
ETAKK N + TSPYW+RCLSLPSRQ AKLSPVV +S VPG+PP KD
Sbjct: 113 ETAKKPNAT---GSTTSPYWKRCLSLPSRQAAKLSPVV-STQLSAGVPGDPPNKD----- 163
Query: 623 VPRSLSMPGRNK 658
RSLSMPGRNK
Sbjct: 164 YSRSLSMPGRNK 175
Score = 80 bits (195), Expect = 3e-013
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Frame = +1
Query: 259 THSDLSIQIPPRPIPFPGGGSRIPKGSLKSTSSFKSGGTTSSPRGILRNLSLKKKAVS 432
+H DLSIQIP R +PF G R PKGSLKST SFKS GTTSSPRGILRNLSLKKK +S
Sbjct: 43 SHLDLSIQIPSRSLPF--GNGRNPKGSLKSTPSFKS-GTTSSPRGILRNLSLKKKVIS 97
>gi|30686985|ref|NP_197377.2| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 411
Score = 59 bits (140), Expect = 6e-007
Identities = 36/74 (48%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 431 LIEEETAKKTNNNP-PGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPK-- 601
L+ + +T+ P S TSPYW+RCLSLPS AKLS VV VS V E PK
Sbjct: 85 LLLSPSVSETSEKPLVASPITSPYWKRCLSLPSSNSAKLSLVVSTTPVSAVVHSEQPKSN 144
Query: 602 KDSIRPPVPRSLSM 643
KD + V RSLSM
Sbjct: 145 KDGLHASVSRSLSM 158
>gi|26452687|dbj|BAC43426.1| unknown protein [Arabidopsis thaliana]
Length = 411
Score = 57 bits (136), Expect = 2e-006
Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 431 LIEEETAKKTNNNP-PGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPK-- 601
L+ + +T+ P S TSPYW+RCLSLPS KLS VV VS V E PK
Sbjct: 85 LLLSPSVSETSEKPLVASPITSPYWKRCLSLPSSNSVKLSLVVSTTPVSAVVHSEQPKSN 144
Query: 602 KDSIRPPVPRSLSM 643
KD + V RSLSM
Sbjct: 145 KDGLHASVSRSLSM 158
>gi|297812061|ref|XP_002873914.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 412
Score = 57 bits (135), Expect = 2e-006
Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 431 LIEEETAKKTNNNP-PGSAATSPYWQRCLSLPSRQPAKLSPVVPPAHVSVSVPGEPPK-- 601
L+ T +T+ P S TSPYW+RCLSLPS AKLS V VS V E PK
Sbjct: 86 LLLSPTVSETSERPLVASPITSPYWKRCLSLPSTNAAKLSLAVSTPPVSAVVHSEQPKSN 145
Query: 602 KDSIRPPVPRSLSM 643
K+ + V RSLSM
Sbjct: 146 KNGVHASVSRSLSM 159
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 670,546,551,498
Number of Sequences: 15229318
Number of Extensions: 670546551498
Number of Successful Extensions: 203192682
Number of sequences better than 0.0: 0
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