BLASTX 7.6.2
Query= UN72341 /QuerySize=340
(339 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 117 1e-027
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 117 2e-027
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 117 2e-027
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 111 1e-025
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 111 1e-025
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 117 bits (293), Expect = 1e-027
Identities = 58/84 (69%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Frame = +3
Query: 72 EGERRMQNQRLKQQQAMMQQ----QRHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCR 239
+ R Q+Q+ +QQQAMMQQ Q+HSLYHP ++A PPQ+EP+PSGNLPPGFDPSTCR
Sbjct: 2 QNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLA--PPQLEPVPSGNLPPGFDPSTCR 59
Query: 240 SVYAGNIHTQVTEVLLQEIFATFG 311
SVY GNIHTQVTE LLQEIF + G
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTSTG 83
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 117 bits (291), Expect = 2e-027
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQQRHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGN 257
+++ Q+Q+ QQAMM QQ SLYHP +MA PPQMEPLPSGNLPPGFDP+TCRSVYAGN
Sbjct: 13 QQQQQHQQAMIQQAMM-QQHPSLYHPGVMA--PPQMEPLPSGNLPPGFDPTTCRSVYAGN 69
Query: 258 IHTQVTEVLLQEIFATFG 311
IHTQVTE+LLQEIFA+ G
Sbjct: 70 IHTQVTEILLQEIFASTG 87
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 117 bits (291), Expect = 2e-027
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQQRHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGN 257
+++ Q+Q+ QQAMM QQ SLYHP +MA PPQMEPLPSGNLPPGFDP+TCRSVYAGN
Sbjct: 13 QQQQQHQQAMIQQAMM-QQHPSLYHPGVMA--PPQMEPLPSGNLPPGFDPTTCRSVYAGN 69
Query: 258 IHTQVTEVLLQEIFATFG 311
IHTQVTE+LLQEIFA+ G
Sbjct: 70 IHTQVTEILLQEIFASTG 87
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 111 bits (275), Expect = 1e-025
Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQQRHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGN 257
+++ Q Q++ QQA+MQQQ SLYHP L+A PPQ+EP+PSGNLPPGFDPSTCRSVY GN
Sbjct: 5 KQQQQQQQVMMQQALMQQQ--SLYHPGLLA--PPQIEPIPSGNLPPGFDPSTCRSVYVGN 60
Query: 258 IHTQVTEVLLQEIFATFG 311
IH QVTE LLQE+FA G
Sbjct: 61 IHIQVTEPLLQEVFAGTG 78
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 111 bits (275), Expect = 1e-025
Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
Frame = +3
Query: 78 ERRMQNQRLKQQQAMMQQQRHSLYHPSLMAPPPPQMEPLPSGNLPPGFDPSTCRSVYAGN 257
+++ Q Q++ QQA+MQQQ SLYHP L+A PPQ+EP+PSGNLPPGFDPSTCRSVY GN
Sbjct: 5 KQQQQQQQVMMQQALMQQQ--SLYHPGLLA--PPQIEPIPSGNLPPGFDPSTCRSVYVGN 60
Query: 258 IHTQVTEVLLQEIFATFG 311
IH QVTE LLQE+FA G
Sbjct: 61 IHIQVTEPLLQEVFAGTG 78
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,612,253,855
Number of Sequences: 33410
Number of Extensions: 31612253855
Number of Successful Extensions: 1060535268
Number of sequences better than 0.0: 0
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