BLASTX 7.6.2
Query= UN72390 /QuerySize=763
(762 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=M... 101 6e-021
sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=N... 101 6e-021
sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=C... 100 2e-020
sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=P... 97 1e-019
sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=P... 97 1e-019
sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=P... 96 2e-019
sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=P... 96 3e-019
sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=P... 95 4e-019
sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio ... 95 5e-019
sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=T... 94 7e-019
sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=T... 94 9e-019
sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=P... 93 2e-018
sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=T... 93 2e-018
sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=T... 92 3e-018
sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=P... 92 4e-018
sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=M... 91 7e-018
sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=S... 91 7e-018
sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=S... 91 7e-018
sp|A8WQQ5|EXOS4_CAEBR Putative exosome complex exonuclease RRP41... 90 2e-017
sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=H... 89 2e-017
>sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=Methanobacterium
thermoautotrophicum GN=MTH_683 PE=1 SV=1
Length = 240
Score = 101 bits (251), Expect = 6e-021
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARESK-KATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
S+Y EFG K++V+V+G RE++ + D + C + F+ G D + E
Sbjct: 42 SSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEI 101
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S + +AL +++E FP++ +DVF VLE+ G I+ A +ALADAGI M D++ A
Sbjct: 102 SKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVA 161
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ +G +++D EE+ + +P EIT L T A+ L V+
Sbjct: 162 CAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVE 221
Query: 565 ACSKLGEIMRDCLKQ 609
C ++ E+ ++ L++
Sbjct: 222 GCLRIHEVQKEALRK 236
>sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=Nitrosopumilus
maritimus (strain SCM1) GN=Nmar_0432 PE=3 SV=1
Length = 244
Score = 101 bits (251), Expect = 6e-021
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
S+Y EFG+ K++V VFG R+ K S +D G L F+ + + E
Sbjct: 42 SSYIEFGDNKILVGVFGPRDVHPKHMSDTDTGILRVRYHMEPFSVGERKNPAPSRREIEI 101
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ +ALE +M+E FP+T VDVF VL++ G ++ A +ALADAGI M D++ A
Sbjct: 102 SKVIKEALEPAVMLEKFPRTAVDVFIEVLQADGGTRCAALTAASVALADAGIPMRDMVAA 161
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
++ + ++++D EE+ + MP+ +IT L + T + +Q+ VD
Sbjct: 162 IAAGKVADTVILDVNNEEDQAGQADMPIGYMPNLEKITLLQLDGVLTPEEYKKCIQVGVD 221
Query: 565 ACSKLGEIMRDCL 603
C + E+ + L
Sbjct: 222 GCKLVYELQKKAL 234
>sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=Cenarchaeum
symbiosum GN=CENSYa_1536 PE=3 SV=1
Length = 243
Score = 100 bits (247), Expect = 2e-020
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Frame = +1
Query: 28 NLSAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK-- 198
N SAY EFG+ K++ +FG R+ K ++ G L C + F+ +
Sbjct: 40 NGSAYIEFGDNKILAGIFGPRDVHPKHMVRTETGILRCRYHMSPFSVSERKKPAPSRREI 99
Query: 199 EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLI 378
E S ++ +ALE +M+E FP+T VDVF VL++ G ++ A +ALADAGI M D++
Sbjct: 100 EISKVIKEALEPSLMLEQFPRTAVDVFIEVLQADGGSRCAALAAASVALADAGIPMRDMV 159
Query: 379 TAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLC 558
+A + + ++++D EE+ + MP+ ++T + + T + +
Sbjct: 160 SACAAGKVADTIVLDVNNEEDQAGQADMPVGYMPNLDQVTLIQLDGVLTPDEYSRCAAMA 219
Query: 559 VDACSKLGEIMRDCL 603
+D C ++ E+ + L
Sbjct: 220 IDGCKQVYEVQKKAL 234
>sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=Pcal_0933 PE=3 SV=1
Length = 246
Score = 97 bits (240), Expect = 1e-019
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK---E 201
SA +G T + +V+G RE + S D G + F++ T + E
Sbjct: 39 SAVVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIE 98
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S +L +ALE +M+E +P++ +DVF +L++ GS ++ A LALADAGI M DL+
Sbjct: 99 ISKVLREALEPAVMLEQYPRSRIDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVV 158
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
VSV + ++++D E+ +G + MP+ T L + WT EA+ L V
Sbjct: 159 GVSVGLVDGTVVLDLNGLEDNYGEGDMPVGYMPNLRRFTLLQLDGAWTREKFLEALGLAV 218
Query: 562 DACSKLGEIMRDCLKQAASASDELTY 639
+ ++ R+ LK A E Y
Sbjct: 219 KGAEYVYQVAREALKNKYMAIAEEIY 244
>sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=Pyrococcus
furiosus GN=PF1568 PE=3 SV=1
Length = 250
Score = 97 bits (239), Expect = 1e-019
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Frame = +1
Query: 28 NLSAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK-- 198
N SAY E+G K+I +V+G RE K D L + F+ G D +
Sbjct: 40 NGSAYIEWGKNKIIAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSI 99
Query: 199 EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLI 378
E S ++ ALE +++E FP+T +DVF VL++ I+ A LALADAGI M DL+
Sbjct: 100 EISKVIRGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLV 159
Query: 379 TAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLC 558
A S I +++D EE+ + + MP +++IT L + T EA++L
Sbjct: 160 AACSAGKIEGEIVLDLNKEEDNYGEADVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLA 219
Query: 559 VDACSKLGEIMRDCLKQ 609
+ + + R+ LK+
Sbjct: 220 IKGAKAVYQKQREALKE 236
>sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=Pyrococcus
horikoshii GN=PH1549 PE=3 SV=1
Length = 249
Score = 96 bits (237), Expect = 2e-019
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Frame = +1
Query: 28 NLSAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK-- 198
N SAY E+G K+I +V+G RE K D L + F+ G D +
Sbjct: 40 NGSAYIEWGRNKIIAAVYGPRELHSKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSI 99
Query: 199 EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLI 378
E S ++ ALE +++E FP+T++DVF VL++ I+ A LALADAGI M DL+
Sbjct: 100 EISKVIKGALEPALILEMFPRTSIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLV 159
Query: 379 TAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLC 558
A + I +++D EE+ + + MP +++IT L + T EA++L
Sbjct: 160 AACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVRLA 219
Query: 559 VDACSKLGEIMRDCLKQ 609
+ + + R+ LK+
Sbjct: 220 IKGAKAVYQKQREALKE 236
>sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=Pyrobaculum
aerophilum GN=PAE2207 PE=3 SV=1
Length = 246
Score = 96 bits (236), Expect = 3e-019
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK---E 201
SA +G T + +V+G RE + S D G + F++ T + E
Sbjct: 39 SAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIE 98
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S +L +ALE I++E +P++ +DVF +L++ GS ++ A LALADAGI M DL+
Sbjct: 99 ISKILREALEPAIVLEQYPRSRIDVFVEILQADGSTRVASLTAASLALADAGIYMRDLVV 158
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
VSV + ++++D E+ +G + MP+ T L + WT +A+ L V
Sbjct: 159 GVSVGLVDGTVVLDLNGLEDQYGEGDLPLGYMPNLKRFTLLQLDGAWTRDMFLQALNLAV 218
Query: 562 DACSKLGEIMRDCLKQAASASDELTY 639
+ +I RD LK + E Y
Sbjct: 219 RGAEYVYQIARDALKNKYMSIAEEIY 244
>sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=Pyrococcus
abyssi GN=PYRAB06100 PE=1 SV=1
Length = 249
Score = 95 bits (235), Expect = 4e-019
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Frame = +1
Query: 28 NLSAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK-- 198
N SAY E+G K+I +V+G RE K D L + F+ G D +
Sbjct: 40 NGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSI 99
Query: 199 EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLI 378
E S ++ ALE +++E FP+T +DVF VL++ I+ A LALADAGI M DL+
Sbjct: 100 EISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLV 159
Query: 379 TAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLC 558
A + I +++D EE+ + + MP +++IT L + T EA++L
Sbjct: 160 AACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFIEAVKLA 219
Query: 559 VDACSKLGEIMRDCLKQ 609
+ + + R+ LK+
Sbjct: 220 IKGAKAVYQKQREALKE 236
>sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio rerio GN=exosc6
PE=2 SV=2
Length = 271
Score = 95 bits (234), Expect = 5e-019
Identities = 50/139 (35%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARESKKATSYS-DVGRLNCNVSYTTFASPTLGS--QGTDHKEY 204
SAY E GNTK+I SV+G +E+++ GRL C+ F+ G+ QG++ ++
Sbjct: 58 SAYIEAGNTKIICSVYGPKETERRDETDMKTGRLVCDFRLAPFSCVKRGAWIQGSEERDL 117
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S+ L ++L + + +P++ +DV +VLE+ GS L ++CA +ALADAGI MYD++
Sbjct: 118 SATLMESLRPGVCLHRYPRSQIDVNVMVLENDGSVLAHAVTCASMALADAGIEMYDIVLG 177
Query: 385 VSVSCIGKSLMIDPVTEEE 441
++ G + ++DP EE
Sbjct: 178 CTLRQSGNACLVDPSYAEE 196
>sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2036 PE=3
SV=1
Length = 249
Score = 94 bits (233), Expect = 7e-019
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SAY E+G K++ +V+G RE K D L + F+ G D + E
Sbjct: 42 SAYIEWGKNKILAAVYGPREIHPKHLQRPDTAVLRVRYNMAPFSVEERKKPGPDRRSVEI 101
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ ALE +++E FP+T VDVF VL++ I+ A LALADAG+ M DL+ A
Sbjct: 102 SKVIRGALEPALILEMFPRTVVDVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAA 161
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ I +++D +E+ + + MP +++IT L + T EA++L +
Sbjct: 162 CAAGKIDGEIVLDLNKDEDNYGEADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVKLAIK 221
Query: 565 ACSKLGEIMRDCLKQ 609
+ + R+ LK+
Sbjct: 222 GAKAVYQKQREALKE 236
>sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=Thermococcus
onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1
Length = 249
Score = 94 bits (232), Expect = 9e-019
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SAY E+G K++ +V+G RE K D L + F+ G D + E
Sbjct: 42 SAYVEWGKNKILAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEI 101
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ ALE +++E FP+T +D+F VL++ I+ A LALADAGI M DL+ A
Sbjct: 102 SKVIRGALEPALILEMFPRTAIDIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAA 161
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ I +++D EE+ + + MP +++IT L + T EA++L +
Sbjct: 162 CAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTRDEFIEAVRLAIK 221
Query: 565 ACSKLGEIMRDCLKQ 609
+ + R+ LK+
Sbjct: 222 GAKAVYQKQREALKE 236
>sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=Pyrococcus
kodakaraensis GN=TK1634 PE=3 SV=1
Length = 249
Score = 93 bits (230), Expect = 2e-018
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SAY E+G KV+ +V+G RE K D L + F+ G D + E
Sbjct: 42 SAYVEWGKNKVLAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEI 101
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ ALE +++ FP+T +DVF +L++ I+ A LALADAGI M DL+ A
Sbjct: 102 SKVIRGALEPALLLHMFPRTAIDVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAA 161
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ I +++D EE+ + + MP +++IT L + T EA++L +
Sbjct: 162 CAAGKIDGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFLEAVRLAIK 221
Query: 565 ACSKLGEIMRDCLKQ 609
+ + R+ LK+
Sbjct: 222 GAKAVYQKQREALKE 236
>sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=Thermoproteus
neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1381 PE=3
SV=1
Length = 246
Score = 93 bits (230), Expect = 2e-018
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK---E 201
SA +G T + +V+G RE + S D G + F++ T + E
Sbjct: 39 SAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIE 98
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S +L +ALE +M+E +P++ +DVF +L++ GS ++ A LALADAGI M DL+
Sbjct: 99 ISKVLREALEPAVMLEQYPRSRIDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVI 158
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
VSV + ++++D E+ +G + MP+ T L + W + EA+ L V
Sbjct: 159 GVSVGLVDGTVVLDLNGLEDQYGEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEALNLAV 218
Query: 562 DACSKLGEIMRDCLKQAASASDELTY 639
+ + RD LK A E Y
Sbjct: 219 KGAEFVYQKARDALKNRYMAIAEEIY 244
>sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1)
GN=TV0310 PE=3 SV=1
Length = 248
Score = 92 bits (227), Expect = 3e-018
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARES-KKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SAY E+G K+IV V+G +E+ K + D + + F+ G D + E
Sbjct: 43 SAYIEWGGNKIIVGVYGPKEAYPKHSQDIDHAVVKARYNMAAFSVDERKRPGPDRRTMEI 102
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ +AL IM+E FP+ +DV+ VL++ ++ A +ALADAGI M D++
Sbjct: 103 SKVISEALSSSIMIEQFPRAEIDVYIEVLQADAGTRIAGLTAATVALADAGIPMRDMVVG 162
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ + +++D EE+ + M MP EI L + + T EA + ++
Sbjct: 163 CTAGKVDGHIVLDLSKEEDNFGEADIPMAIMPKTGEIVLLQMDGDVTEDEFYEATSMIIE 222
Query: 565 ACSKLGEIMRDCL 603
A K+ +I R+ L
Sbjct: 223 ATKKISQIQRNAL 235
>sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1
Length = 246
Score = 92 bits (226), Expect = 4e-018
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK---E 201
SA +G T + +V+G RE + S D G + F++ T + E
Sbjct: 39 SAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPTRREIE 98
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S +L +ALE +++E +P++ +DVF +L++ GS ++ A LALADAG+ M DL+
Sbjct: 99 ISKILREALEPAVVLEQYPRSRIDVFIEILQADGSTRVASLTAASLALADAGVYMRDLVI 158
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
VSV + ++++D E+ +G + MP+ T L + WT EA+ L +
Sbjct: 159 GVSVGLVDGAVVLDLNGLEDQYGEGDLPVGYMPNLKRFTLLQLDGAWTRDKFLEALNLAI 218
Query: 562 DACSKLGEIMRDCLK 606
+ + RD LK
Sbjct: 219 KGAEFVYQKARDALK 233
>sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=Methanopyrus
kandleri GN=MK0381 PE=3 SV=1
Length = 239
Score = 91 bits (224), Expect = 7e-018
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SAY E G K++ +V+G RE + D + + F+ G D + E
Sbjct: 40 SAYLELGANKIVAAVYGPRELHPRHKQKPDRAVVRFRYNMAPFSVDERKRPGPDRRSIEI 99
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S + +ALE I E +P+T +D+F VL++ IS A +ALADAGI M DL+ A
Sbjct: 100 SKLSKEALEPAIFTEYYPRTAIDIFVEVLQADAGTRCAGISAASVALADAGIEMRDLVAA 159
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ + +++DP+ E+G + + MP +IT L + + T +A++L
Sbjct: 160 CAAGKVEGKVVLDPMYYEDGYGEADVPLAMMPKEGKITLLQMDGDMTPGEFKQAVKLAKK 219
Query: 565 ACSKLGEIMRDCLKQ 609
C + + R LK+
Sbjct: 220 GCKIVYKEQRRALKE 234
>sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=Sulfolobus
acidocaldarius GN=Saci_0610 PE=3 SV=1
Length = 243
Score = 91 bits (224), Expect = 7e-018
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SA E GNTKVI +V+G +E + + D L T F++ + + E
Sbjct: 41 SAIFEMGNTKVIAAVYGPKEMHPRHLALPDKASLRVRYHMTPFSTDERKNPAPSRREIEL 100
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ +ALE I++ FP+T +D+F VL++ V + A +ALADAGI M DLI
Sbjct: 101 SKVIREALESTILLNLFPRTVIDIFMEVLQADAGTRLVALMAASMALADAGIPMRDLIAG 160
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
V+V SL++D +E+ + + +PS ++ L + T A +L
Sbjct: 161 VAVGKADGSLVLDLNEQEDMWGEADMPIAVLPSLGQVVLLQLNGFMTPDEFRRAFELAQK 220
Query: 565 ACSKLGEIMRDCLK 606
S + + ++ LK
Sbjct: 221 GISSIYALQKEALK 234
>sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=Sulfolobus
solfataricus GN=SSO0735 PE=1 SV=1
Length = 248
Score = 91 bits (224), Expect = 7e-018
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE-SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SA E GNTK I +V+G +E + S D L T F++ + + E
Sbjct: 44 SAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIEL 103
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ +ALE +++E FP+T +DVF +L++ V + A LALADAGI M DLI
Sbjct: 104 SKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAG 163
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
V+V +++D E+ + + MPS +++T + T +A L V
Sbjct: 164 VAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVK 223
Query: 565 ACSKLGEIMRDCLK 606
+ + + R+ LK
Sbjct: 224 GINIIYNLEREALK 237
>sp|A8WQQ5|EXOS4_CAEBR Putative exosome complex exonuclease RRP41
OS=Caenorhabditis briggsae GN=exos-4.1 PE=3 SV=1
Length = 240
Score = 90 bits (221), Expect = 2e-017
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK---EY 204
S Y E GNTKV+ +V+G ESK + D + C S TTF+ ++ + E
Sbjct: 35 SCYLEHGNTKVLCAVYGPYESKASKRLEDRCAIVCQYSTTTFSGLERKNRPRGDRKSTEI 94
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S +L KA E VI+ E+FP++ +D+F V++ GS+L ++ LALADAGI M + +A
Sbjct: 95 SRLLEKAFESVILTESFPRSQIDIFCEVIQGDGSNLAACVNATSLALADAGIPMKGIASA 154
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
+ + ++D + EE + + R E+ + + + +++ M
Sbjct: 155 ATCGIVETKPIVDLTSREETDLLPRVTLATICGRDEVILVELQNRLHIDHLSVVMDAAKA 214
Query: 565 ACSKLGEIMRDCLKQAASA 621
C+ + E + +Q A
Sbjct: 215 TCADVYECLAVVAQQHLKA 233
>sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0571 PE=3 SV=1
Length = 255
Score = 89 bits (220), Expect = 2e-017
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARES-KKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--EY 204
SA E+G T+VI +V+G RE+ + + D + C F++ + + E
Sbjct: 50 SALVEYGGTRVIAAVYGPREAHPRHVALPDRAIIRCRYHMAPFSTAERKTPAPTRREVEL 109
Query: 205 SSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITA 384
S ++ +ALE V++ E +P+T +DV+ VL+S G I+ A LALADAGI M DL+
Sbjct: 110 SKVIREALEAVVISELYPRTAIDVYMEVLQSDGGTRTAAITAASLALADAGIAMRDLVAG 169
Query: 385 VSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVD 564
V+V + L++D E+ + + PS ++ L + T +A++L
Sbjct: 170 VAVGKVDGVLVLDIDEIEDNYAEADMPVAMAPSLDKVLLLQLNGVLTHDEFVKALELARK 229
Query: 565 ACSKLGEIMRDCLKQ 609
+ + ++ L++
Sbjct: 230 GIQVIYNLQKEALRK 244
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,562,603,231
Number of Sequences: 518415
Number of Extensions: 238562603231
Number of Successful Extensions: 1511718114
Number of sequences better than 0.0: 0
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