BLASTX 7.6.2
Query= UN72390 /QuerySize=763
(762 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease fami... 365 2e-101
TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exori... 84 6e-017
TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exori... 84 6e-017
TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease fami... 62 4e-010
TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease fami... 62 4e-010
TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease fami... 62 4e-010
TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease fami... 62 4e-010
TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease fami... 62 4e-010
>TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr4:13739961-13741647 FORWARD
Length = 257
Score = 365 bits (935), Expect = 2e-101
Identities = 186/199 (93%), Positives = 189/199 (94%), Gaps = 1/199 (0%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSM 213
SAYAEFGNTKVIVSVFG RESKKA YSDVGRLNCNVSYT FASPTLG QGTDHKEYSSM
Sbjct: 59 SAYAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSYTNFASPTLG-QGTDHKEYSSM 117
Query: 214 LHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSV 393
LHKALEGVIMMETFPKTTVDVFALVLESGGSDL V+ISCA LALADAGIMMYDLITAVSV
Sbjct: 118 LHKALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSV 177
Query: 394 SCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCVDACS 573
SCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR EITQLTIT EWTTPNINEAMQLC+DA S
Sbjct: 178 SCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASS 237
Query: 574 KLGEIMRDCLKQAASASDE 630
KLGEIMRDCLKQ+ASASDE
Sbjct: 238 KLGEIMRDCLKQSASASDE 256
>TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 84 bits (207), Expect = 6e-017
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE--SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--E 201
SA E GNTKVI +V+G RE +K +D + C S F++ Q D + E
Sbjct: 35 SAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTE 94
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S ++ + +E I+ E P + +D+F VL++ G I+ A LALADAGI M DL
Sbjct: 95 LSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLAV 154
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
+ S + + ++D E+ + +P +++ L + ++ L
Sbjct: 155 SCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVSLLQMDAKLPMETFETVFALAS 214
Query: 562 DACSKLGEIMRDCLKQ 609
+ C + E +R+ L++
Sbjct: 215 EGCKAIAERIREVLQE 230
>TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 84 bits (207), Expect = 6e-017
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Frame = +1
Query: 34 SAYAEFGNTKVIVSVFGARE--SKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHK--E 201
SA E GNTKVI +V+G RE +K +D + C S F++ Q D + E
Sbjct: 35 SAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTE 94
Query: 202 YSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLIT 381
S ++ + +E I+ E P + +D+F VL++ G I+ A LALADAGI M DL
Sbjct: 95 LSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLAV 154
Query: 382 AVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRSEITQLTITSEWTTPNINEAMQLCV 561
+ S + + ++D E+ + +P +++ L + ++ L
Sbjct: 155 SCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVSLLQMDAKLPMETFETVFALAS 214
Query: 562 DACSKLGEIMRDCLKQ 609
+ C + E +R+ L++
Sbjct: 215 EGCKAIAERIREVLQE 230
>TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 62 bits (148), Expect = 4e-010
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Frame = +1
Query: 52 GNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSMLHKALE 231
G+TKV+ +V+G + K ++ + P G G KEY +L + ++
Sbjct: 36 GDTKVLAAVYGPKAGTKKNENAE------KACFEVIWKPKSGQIGKVEKEYEMILKRTIQ 89
Query: 232 GVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKS 411
+ ++ P TT V V+ GS LP I+ A AL DAGI M L A+ C+ ++
Sbjct: 90 SICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLAEN 148
Query: 412 --LMIDPVTEEE 441
L++DP EE
Sbjct: 149 GYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 62 bits (148), Expect = 4e-010
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Frame = +1
Query: 52 GNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSMLHKALE 231
G+TKV+ +V+G + K ++ + P G G KEY +L + ++
Sbjct: 36 GDTKVLAAVYGPKAGTKKNENAE------KACFEVIWKPKSGQIGKVEKEYEMILKRTIQ 89
Query: 232 GVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKS 411
+ ++ P TT V V+ GS LP I+ A AL DAGI M L A+ C+ ++
Sbjct: 90 SICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLAEN 148
Query: 412 --LMIDPVTEEE 441
L++DP EE
Sbjct: 149 GYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 62 bits (148), Expect = 4e-010
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Frame = +1
Query: 52 GNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSMLHKALE 231
G+TKV+ +V+G + K ++ + P G G KEY +L + ++
Sbjct: 36 GDTKVLAAVYGPKAGTKKNENAE------KACFEVIWKPKSGQIGKVEKEYEMILKRTIQ 89
Query: 232 GVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKS 411
+ ++ P TT V V+ GS LP I+ A AL DAGI M L A+ C+ ++
Sbjct: 90 SICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLAEN 148
Query: 412 --LMIDPVTEEE 441
L++DP EE
Sbjct: 149 GYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 62 bits (148), Expect = 4e-010
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Frame = +1
Query: 52 GNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSMLHKALE 231
G+TKV+ +V+G + K ++ + P G G KEY +L + ++
Sbjct: 36 GDTKVLAAVYGPKAGTKKNENAE------KACFEVIWKPKSGQIGKVEKEYEMILKRTIQ 89
Query: 232 GVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKS 411
+ ++ P TT V V+ GS LP I+ A AL DAGI M L A+ C+ ++
Sbjct: 90 SICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLAEN 148
Query: 412 --LMIDPVTEEE 441
L++DP EE
Sbjct: 149 GYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 62 bits (148), Expect = 4e-010
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Frame = +1
Query: 52 GNTKVIVSVFGARESKKATSYSDVGRLNCNVSYTTFASPTLGSQGTDHKEYSSMLHKALE 231
G+TKV+ +V+G + K ++ + P G G KEY +L + ++
Sbjct: 36 GDTKVLAAVYGPKAGTKKNENAE------KACFEVIWKPKSGQIGKVEKEYEMILKRTIQ 89
Query: 232 GVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKS 411
+ ++ P TT V V+ GS LP I+ A AL DAGI M L A+ C+ ++
Sbjct: 90 SICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLAEN 148
Query: 412 --LMIDPVTEEE 441
L++DP EE
Sbjct: 149 GYLVLDPNKLEE 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,655,365,806
Number of Sequences: 33410
Number of Extensions: 31655365806
Number of Successful Extensions: 1060549370
Number of sequences better than 0.0: 0
|
