Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN72417


BLASTX 7.6.2

Query= UN72417 /QuerySize=744
        (743 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G10840.1 | Symbols: TIF3H1 | TIF3H1; translati...    389   2e-108
TAIR9_protein||AT1G10840.2 | Symbols: TIF3H1 | TIF3H1; translati...    226   2e-059
TAIR9_protein||AT5G23540.1 | Symbols:  | 26S proteasome regulato...     50   1e-006

>TAIR9_protein||AT1G10840.1 | Symbols: TIF3H1 | TIF3H1; translation initiation
        factor | chr1:3607885-3610299 REVERSE

          Length = 338

 Score =  389 bits (997), Expect = 2e-108
 Identities = 194/209 (92%), Positives = 200/209 (95%)
 Frame = +1

Query: 115 MATMARSFLQAISKEEAVAPPLRVVQIEGLAALKIIKHCKEFAPTLVTGQLLGLDVGSVL 294
           MATMARSFLQAISK+EAVAPPLRVVQIEGLA LKIIKHCKEF+PTLVTGQLLGLDVGSVL
Sbjct:   1 MATMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVL 60

Query: 295 EITNCFPFPVRDEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIE 474
           E+TNCFPFPVRD+DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIE
Sbjct:  61 EVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIE 120

Query: 475 TFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGRKLYRRQVEGKNFSWM 654
           TFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRG      ++  KNFSWM
Sbjct: 121 TFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWM 180

Query: 655 DIFEEIPIKVSNSALVSAFMTELETDTPV 741
           DIFEEIPIKVSNSALVSAFMTELETDTPV
Sbjct: 181 DIFEEIPIKVSNSALVSAFMTELETDTPV 209

>TAIR9_protein||AT1G10840.2 | Symbols: TIF3H1 | TIF3H1; translation initiation
        factor | chr1:3607885-3609657 REVERSE

          Length = 251

 Score =  226 bits (574), Expect = 2e-059
 Identities = 112/122 (91%), Positives = 114/122 (93%)
 Frame = +1

Query: 376 MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL 555
           MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL
Sbjct:   1 MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL 60

Query: 556 ALKALKLSDSFMELYRGRKLYRRQVEGKNFSWMDIFEEIPIKVSNSALVSAFMTELETDT 735
           ALKALKLSDSFMELYRG      ++  KNFSWMDIFEEIPIKVSNSALVSAFMTELETDT
Sbjct:  61 ALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDT 120

Query: 736 PV 741
           PV
Sbjct: 121 PV 122

>TAIR9_protein||AT5G23540.1 | Symbols:  | 26S proteasome regulatory subunit,
        putative | chr5:7937772-7939339 FORWARD

          Length = 309

 Score =  50 bits (118), Expect = 1e-006
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = +1

Query: 187 VQIEGLAALKIIKHCKEFAPTLVTGQLLGLDVGS-VLEITNCFPFPVRDEDEEIEADGAN 363
           V I  LA LK++KH +   P  V G +LG  V    + + + F  P       +EA    
Sbjct:  30 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 89

Query: 364 YQLEMMRCLREVNVDNNTVGWYQS-TVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKA 540
           +Q  M+  L++       VGWY S    G + +   I T  +++   +R V ++ DP ++
Sbjct:  90 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 149

Query: 541 DLGVLALKALK 573
             G + + A +
Sbjct: 150 VKGKVVIDAFR 160

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,655,365,806
Number of Sequences: 33410
Number of Extensions: 31655365806
Number of Successful Extensions: 1060549370
Number of sequences better than 0.0: 0