BLASTX 7.6.2
Query= UN72433 /QuerySize=811
(810 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 289 2e-078
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 289 bits (737), Expect = 2e-078
Identities = 161/204 (78%), Positives = 168/204 (82%), Gaps = 17/204 (8%)
Frame = +2
Query: 56 MAVSSVTWFTLPSLANPTSSSSPTRQKVSLLSLLPSSSTHVSSSIGSGSSVLNKPSSLFT 235
MAVS+V+ F LPS P+SS S TR KV SLLPSSSTH G S VL KPS T
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKV---SLLPSSSTHG----GLSSCVLTKPSVSLT 53
Query: 236 NKIFAAPETL-----TLDQPSSEEFSEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIE 400
K+FA P+TL LD+P+ SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIE
Sbjct: 54 -KVFAVPDTLDPTPEILDEPA----SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIE 108
Query: 401 DSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYP 580
DSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYP
Sbjct: 109 DSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYP 168
Query: 581 TAQTIDSLMQLDLPAGVDVEVKL* 652
TAQTIDSLMQLDLPAGVDVEVKL*
Sbjct: 169 TAQTIDSLMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 356 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 532
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 533 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 649
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,655,365,806
Number of Sequences: 33410
Number of Extensions: 31655365806
Number of Successful Extensions: 1060549370
Number of sequences better than 0.0: 0
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