BLASTX 7.6.2
Query= UN72537 /QuerySize=513
(512 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS... 134 5e-031
sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS... 134 5e-031
sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS... 114 5e-025
sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS... 113 6e-025
sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6 OS... 106 8e-023
sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS... 105 2e-022
sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protei... 103 9e-022
sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS... 99 1e-020
sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS... 97 4e-020
sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS... 97 6e-020
sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS... 97 6e-020
sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS... 94 4e-019
sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS... 93 9e-019
sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS... 93 9e-019
sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS... 89 2e-017
sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS... 88 2e-017
sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS... 84 3e-016
sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS... 82 1e-015
sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS... 82 2e-015
sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS... 80 5e-015
>sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens
GN=LSM6 PE=1 SV=1
Length = 80
Score = 134 bits (335), Expect = 5e-031
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +3
Query: 141 KTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 320
+TP+DFLK I GRPVVVKL+SGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 321 RGNNVLYIST 350
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus
GN=Lsm6 PE=2 SV=1
Length = 80
Score = 134 bits (335), Expect = 5e-031
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +3
Query: 141 KTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 320
+TP+DFLK I GRPVVVKL+SGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 321 RGNNVLYIST 350
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=LSM6 PE=3 SV=2
Length = 95
Score = 114 bits (283), Expect = 5e-025
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +3
Query: 138 TKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 317
T +P DFLK + G+ VVV+L SGVDYRGIL+CLDGYMNIAMEQTEE VNG++ N+YGDAF
Sbjct: 21 TGSPTDFLKGVVGKRVVVRLLSGVDYRGILSCLDGYMNIAMEQTEESVNGKVVNRYGDAF 80
Query: 318 IRGNNVLYIS 347
IRGNNVLYIS
Sbjct: 81 IRGNNVLYIS 90
>sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS=Laccaria
bicolor (strain S238N-H82) GN=LSM6 PE=3 SV=1
Length = 99
Score = 113 bits (282), Expect = 6e-025
Identities = 51/70 (72%), Positives = 63/70 (90%)
Frame = +3
Query: 138 TKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 317
T +P DFLK + G+ V+V+L+SGVDYRG+L+CLDGYMNIA+EQTEE+VNG + N+YGDAF
Sbjct: 25 TGSPTDFLKGVVGKRVIVRLTSGVDYRGLLSCLDGYMNIALEQTEEHVNGVVTNRYGDAF 84
Query: 318 IRGNNVLYIS 347
IRGNNVLYIS
Sbjct: 85 IRGNNVLYIS 94
>sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6
OS=Schizosaccharomyces pombe GN=lsm6 PE=2 SV=1
Length = 75
Score = 106 bits (264), Expect = 8e-023
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +3
Query: 144 TPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 323
+P +FL + G+ V+++LSSGVDY+GIL+CLDGYMN+A+E+TEEYVNG+ N YGDAFIR
Sbjct: 4 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIR 63
Query: 324 GNNVLYISTVN 356
GNNVLY+S ++
Sbjct: 64 GNNVLYVSALD 74
>sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS=Ustilago
maydis GN=LSM6 PE=3 SV=2
Length = 85
Score = 105 bits (260), Expect = 2e-022
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +3
Query: 144 TPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 323
+P DFLK + G+ V V+L+SG+DYRG+L+CLDGYMNIA+EQT EYV+G KN YGDAFIR
Sbjct: 14 SPNDFLKGVIGKNVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGIKKNSYGDAFIR 73
Query: 324 GNNVLYISTV 353
GNNV+YI+ +
Sbjct: 74 GNNVMYITAL 83
>sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protein LSm6
OS=Dictyostelium discoideum GN=lsm6 PE=3 SV=1
Length = 88
Score = 103 bits (255), Expect = 9e-022
Identities = 49/76 (64%), Positives = 58/76 (76%)
Frame = +3
Query: 120 NKVSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 299
+ S + +F K GRPVVVKL++GV+YRGIL +DG MNI MEQTEEY+NGQLK
Sbjct: 8 SNTSNNSNAQFNFFKMCIGRPVVVKLNNGVEYRGILEVVDGNMNIVMEQTEEYLNGQLKT 67
Query: 300 KYGDAFIRGNNVLYIS 347
KYGD F+RGNNVLYIS
Sbjct: 68 KYGDCFLRGNNVLYIS 83
>sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=LSM6 PE=3 SV=1
Length = 80
Score = 99 bits (245), Expect = 1e-020
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +3
Query: 117 DNKVSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLK 296
+N + K P+ FL I G PV VKL+SGV Y+G L +DGYMNIA+E+TEEYV+G+L+
Sbjct: 2 ENGSASEGKDPSAFLSEITGAPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVDGKLR 61
Query: 297 NKYGDAFIRGNNVLYIS 347
YGDAF+RGNNVLYIS
Sbjct: 62 RSYGDAFVRGNNVLYIS 78
>sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS=Chaetomium
globosum GN=LSM6 PE=3 SV=2
Length = 82
Score = 97 bits (241), Expect = 4e-020
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 132 GTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 311
G K P+ FL I G PV VKL+SGV Y+G L +DGYMNIA+E+TEEYVNG + YGD
Sbjct: 9 GEGKDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVNGAKRRSYGD 68
Query: 312 AFIRGNNVLYIS 347
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
fumigatus GN=lsm6 PE=3 SV=2
Length = 80
Score = 97 bits (239), Expect = 6e-020
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +3
Query: 117 DNKVSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLK 296
+N S + P+ FL I G PV VKL+SGV Y+G L +DGYMNIA+E++EE+V+G+LK
Sbjct: 2 ENSSSSEGRDPSAFLGEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALERSEEFVDGKLK 61
Query: 297 NKYGDAFIRGNNVLYIS 347
YGDAFIRGNNVLYIS
Sbjct: 62 RSYGDAFIRGNNVLYIS 78
>sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=lsm6
PE=3 SV=2
Length = 80
Score = 97 bits (239), Expect = 6e-020
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +3
Query: 117 DNKVSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLK 296
+N S + P+ FL I G PV VKL+SGV YRG L +DGYMNIA+E++EE+V+G+L+
Sbjct: 2 ENGASSEGRDPSAFLGEIIGAPVTVKLNSGVVYRGELQSVDGYMNIALERSEEFVDGKLR 61
Query: 297 NKYGDAFIRGNNVLYIS 347
YGDAFIRGNNVLYIS
Sbjct: 62 RSYGDAFIRGNNVLYIS 78
>sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS=Neurospora
crassa GN=lsm-6 PE=3 SV=2
Length = 82
Score = 94 bits (232), Expect = 4e-019
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = +3
Query: 141 KTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 320
K P+ FL I G PV VKL+SGV Y+G L +DGYMNIA+E+TEE++NG + YGDAF+
Sbjct: 12 KDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEFINGVKRRSYGDAFV 71
Query: 321 RGNNVLYIS 347
RGNNV+YIS
Sbjct: 72 RGNNVMYIS 80
>sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
clavatus GN=lsm6 PE=3 SV=2
Length = 78
Score = 93 bits (229), Expect = 9e-019
Identities = 43/74 (58%), Positives = 58/74 (78%)
Frame = +3
Query: 126 VSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKY 305
+S + P+ FL I G PV VKL+SGV Y+G L +DGYMNIA+EQ++E+++G+L+ Y
Sbjct: 4 ISSEGRDPSAFLSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQSKEFMDGKLRRSY 63
Query: 306 GDAFIRGNNVLYIS 347
GDAFIRGNNVLYI+
Sbjct: 64 GDAFIRGNNVLYIA 77
>sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS=Coccidioides
immitis GN=LSM6 PE=3 SV=1
Length = 80
Score = 93 bits (229), Expect = 9e-019
Identities = 42/77 (54%), Positives = 59/77 (76%)
Frame = +3
Query: 117 DNKVSGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLK 296
+++ + ++ P+ FL I G V VKL+SGV Y+G L +DGYMNIA+E+T+E+VNG+L+
Sbjct: 2 ESRGAADSQDPSAFLSGITGASVTVKLNSGVVYKGELQSIDGYMNIALEKTQEFVNGKLR 61
Query: 297 NKYGDAFIRGNNVLYIS 347
YGD F+RGNNVLYIS
Sbjct: 62 KSYGDVFVRGNNVLYIS 78
>sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS=Magnaporthe
grisea GN=LSM6 PE=3 SV=1
Length = 83
Score = 89 bits (218), Expect = 2e-017
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +3
Query: 132 GTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 311
G K P FL I G V VKL+SGV Y+G L +DGYMNIA+E+ EE+V GQ K YGD
Sbjct: 9 GEGKDPTSFLGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRSYGD 68
Query: 312 AFIRGNNVLYIS 347
AF+RGNNV+YI+
Sbjct: 69 AFVRGNNVMYIA 80
>sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS=Cryptococcus
neoformans GN=LSM6 PE=3 SV=1
Length = 88
Score = 88 bits (217), Expect = 2e-017
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +3
Query: 144 TPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 323
+P++FL++I G+ V V++ SGVDY G+L CLDGYMN+A+EQ EE+ YGD F+R
Sbjct: 16 SPSEFLRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLR 75
Query: 324 GNNVLYISTV 353
GNNVLYIS +
Sbjct: 76 GNNVLYISAL 85
>sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS=Phaeosphaeria
nodorum GN=LSM6 PE=3 SV=2
Length = 89
Score = 84 bits (207), Expect = 3e-016
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +3
Query: 129 SGTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 308
+G ++ P+ FL I G PV VKL+SG+ Y+G L +DGYMNIA+E+ +E G++ +G
Sbjct: 13 AGDSRDPSGFLSEIIGAPVTVKLNSGIVYKGDLQSVDGYMNIALERCKEVAEGRVIRNWG 72
Query: 309 DAFIRGNNVLYISTVN 356
DAF+RGNNV YIS N
Sbjct: 73 DAFVRGNNVTYISADN 88
>sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS=Botryotinia
fuckeliana (strain B05.10) GN=lsm6 PE=3 SV=2
Length = 85
Score = 82 bits (202), Expect = 1e-015
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = +3
Query: 132 GTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 311
G K P+ FL I G V+VKL++ + ++G L +DGYMNIA+E+ EE+V+G+ K +GD
Sbjct: 9 GEGKDPSSFLSEIIGSKVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 312 AFIRGNNVLYIS 347
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=lsm6 PE=3 SV=2
Length = 85
Score = 82 bits (201), Expect = 2e-015
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = +3
Query: 132 GTTKTPADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 311
G K P+ FL I G V+VKL++ + ++G L +DGYMNIA+E+ EE+V+G+ K +GD
Sbjct: 9 GEGKDPSSFLSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 312 AFIRGNNVLYIS 347
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS=Debaryomyces
hansenii GN=LSM6 PE=3 SV=2
Length = 85
Score = 80 bits (197), Expect = 5e-015
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +3
Query: 129 SGTTKT-PADFLKSIRGRPVVVKLSSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKY 305
SG+ T P+ FL I G V V+L +GV+Y G L +DGYMNI +++T+E+V G Y
Sbjct: 10 SGSENTGPSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNY 69
Query: 306 GDAFIRGNNVLYIS 347
GD FIRGNNVLYIS
Sbjct: 70 GDVFIRGNNVLYIS 83
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,089,486,026
Number of Sequences: 518415
Number of Extensions: 239089486026
Number of Successful Extensions: 1518758948
Number of sequences better than 0.0: 0
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