BLASTX 7.6.2
Query= UN72717 /QuerySize=719
(718 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 317 5e-087
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 47 8e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 47 8e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 47 8e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 47 8e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 47 8e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 47 8e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 317 bits (811), Expect = 5e-087
Identities = 170/201 (84%), Positives = 178/201 (88%), Gaps = 11/201 (5%)
Frame = +1
Query: 88 MAVSSVTSFILPSFANLSSSSSSTKQKVSLLPSSSSSSSTHGGIGSCVLNKPSISFTKKV 267
MAVS+V+SF+LPSF SSS SST+ KVSLLP SSSTHGG+ SCVL KPS+S T KV
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLP----SSSTHGGLSSCVLTKPSVSLT-KV 55
Query: 268 FAAPETL--TPETLDEPASDDFSEVPSSSSISVDADKMAPKQKIRIKLRSHWVPLIEDSC 441
FA P+TL TPE LDEPA SEVPSSSSISVDADKMAPKQKIRIKLRS+WVPLIEDSC
Sbjct: 56 FAVPDTLDPTPEILDEPA----SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSC 111
Query: 442 KQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIGILYPTAQ 621
KQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMI ILYPTAQ
Sbjct: 112 KQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQ 171
Query: 622 TIDSLMQLDLPAGVDVEVKL* 684
TIDSLMQLDLPAGVDVEVKL*
Sbjct: 172 TIDSLMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 47 bits (111), Expect = 8e-006
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 388 KIRIKLRSHWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 564
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 565 HFEIRTHQRMIGILYPTAQTIDSLMQLDLPAGVDVEVKL 681
FE+R H+R+I L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,698,405,169
Number of Sequences: 33410
Number of Extensions: 31698405169
Number of Successful Extensions: 1060557863
Number of sequences better than 0.0: 0
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