BLASTX 7.6.2
Query= UN72943 /QuerySize=817
(816 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23610.1 | Symbols: | INVOLVED IN: biological... 188 5e-048
TAIR9_protein||AT5G23610.2 | Symbols: | INVOLVED IN: biological... 188 5e-048
TAIR9_protein||AT5G51330.1 | Symbols: SWI1, DYAD | SWI1 (SWITCH1... 136 2e-032
TAIR9_protein||AT2G01810.1 | Symbols: | PHD finger family prote... 50 1e-006
TAIR9_protein||AT1G66170.1 | Symbols: MMD1 | MMD1 (MALE MEIOCYTE... 48 6e-006
>TAIR9_protein||AT5G23610.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; BEST Arabidopsis thaliana protein match is: SWI1 (SWITCH1);
phospholipase C (TAIR:AT5G51330.1); Has 107 Blast hits to 101 proteins
in 23 species: Archae - 3; Bacteria - 6; Metazoa - 1; Fungi - 4; Plants
- 61; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). |
chr5:7957641-7959968 REVERSE
Length = 500
Score = 188 bits (476), Expect = 5e-048
Identities = 108/245 (44%), Positives = 147/245 (60%), Gaps = 26/245 (10%)
Frame = +3
Query: 9 SSKSSESSSSSLLDKQKQKTCLRRGMTTRWNTDRIDNAELALFEILKEKGASFERPVPRA 188
S S E + K KQ +R +TTRWN +RI AE L +I+KEKGA+FE+PV R
Sbjct: 100 SDTSFEEKPIIIPPKHKQ----QRVLTTRWNNERIKFAEQTLADIMKEKGATFEKPVTRQ 155
Query: 189 ELRVSARRRIGDTGLLDHLLKHIDGNVTPGGAERFRRCHNTEGTMQYWLESADLIKIKLE 368
LRV AR +IGDTGLLDH LKH+DG VTPGG++RFRRC+NT+G MQYWLESADL+KIKLE
Sbjct: 156 LLRVIARSKIGDTGLLDHSLKHMDGKVTPGGSDRFRRCYNTDGCMQYWLESADLVKIKLE 215
Query: 369 SGVCDSNWAPPSWWKLQGANSIIKLEPGVLEPSESPAKLKEEMDKMRSEIKELVSDLALI 548
SG+ D W PP+WW +Q A+S + + + L E+++M+SEIKELVS L
Sbjct: 216 SGIPDPTWVPPAWWMVQTASSHD-------QSAVTSKLLMGEIEQMKSEIKELVSKQNLP 268
Query: 549 K---------------RESGIRDLDSIPLAQWKIQSSSKESPAVSSKLREEIDKMKSDLK 683
RE+ + + I + Q KE + K+ +++ + + L
Sbjct: 269 DHADANEKLFKELKSWRENTDKQIVEISESLTSTQGMFKELNSWKDKVDQQLLGISNTLS 328
Query: 684 NIYPS 698
N+ P+
Sbjct: 329 NLQPN 333
>TAIR9_protein||AT5G23610.2 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; BEST Arabidopsis thaliana protein match is: SWI1 (SWITCH1);
phospholipase C (TAIR:AT5G51330.1); Has 113 Blast hits to 109 proteins
in 23 species: Archae - 3; Bacteria - 8; Metazoa - 4; Fungi - 2; Plants
- 60; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). |
chr5:7957641-7959968 REVERSE
Length = 501
Score = 188 bits (476), Expect = 5e-048
Identities = 108/245 (44%), Positives = 147/245 (60%), Gaps = 26/245 (10%)
Frame = +3
Query: 9 SSKSSESSSSSLLDKQKQKTCLRRGMTTRWNTDRIDNAELALFEILKEKGASFERPVPRA 188
S S E + K KQ +R +TTRWN +RI AE L +I+KEKGA+FE+PV R
Sbjct: 100 SDTSFEEKPIIIPPKHKQ----QRVLTTRWNNERIKFAEQTLADIMKEKGATFEKPVTRQ 155
Query: 189 ELRVSARRRIGDTGLLDHLLKHIDGNVTPGGAERFRRCHNTEGTMQYWLESADLIKIKLE 368
LRV AR +IGDTGLLDH LKH+DG VTPGG++RFRRC+NT+G MQYWLESADL+KIKLE
Sbjct: 156 LLRVIARSKIGDTGLLDHSLKHMDGKVTPGGSDRFRRCYNTDGCMQYWLESADLVKIKLE 215
Query: 369 SGVCDSNWAPPSWWKLQGANSIIKLEPGVLEPSESPAKLKEEMDKMRSEIKELVSDLALI 548
SG+ D W PP+WW +Q A+S + + + L E+++M+SEIKELVS L
Sbjct: 216 SGIPDPTWVPPAWWMVQTASSHD-------QSAVTSKLLMGEIEQMKSEIKELVSKQNLP 268
Query: 549 K---------------RESGIRDLDSIPLAQWKIQSSSKESPAVSSKLREEIDKMKSDLK 683
RE+ + + I + Q KE + K+ +++ + + L
Sbjct: 269 DHADANEKLFKELKSWRENTDKQIVEISESLTSTQGMFKELNSWKDKVDQQLLGISNTLS 328
Query: 684 NIYPS 698
N+ P+
Sbjct: 329 NLQPN 333
>TAIR9_protein||AT5G51330.1 | Symbols: SWI1, DYAD | SWI1 (SWITCH1);
phospholipase C | chr5:20858752-20861680 REVERSE
Length = 640
Score = 136 bits (342), Expect = 2e-032
Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
Frame = +3
Query: 3 AKSSKSSESSSSSLLDKQKQKTCLRRGMTTRWNTDRIDNAELALFEILKEKGASFERPVP 182
A+ +K + + + K+K+ R RW+ +R AE + +++KEK A F +
Sbjct: 267 AQKAKVYDQKKETQIVVYKRKS--ERKFIDRWSVERYKLAERNMLKVMKEKNAVFGNSIL 324
Query: 183 RAELRVSARRRIGDTGLLDHLLKHIDGNVTPGGAERFRRCHNTEGTMQYWLESADLIKIK 362
R ELR AR+ IGDTGLLDHLLKH+ G V PGG +RF R HN +G M+YWLES+DLI I+
Sbjct: 325 RPELRSEARKLIGDTGLLDHLLKHMAGKVAPGGQDRFMRKHNADGAMEYWLESSDLIHIR 384
Query: 363 LESGVCDSNWAPPSWWKLQGANSIIKLEPG-VLEPSESPAKLKEEMDKMRSEIKE 524
E+GV D W PP WKL S + G + + E A LK E+ K+ S+ +E
Sbjct: 385 KEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLKRELKKLASKKEE 439
>TAIR9_protein||AT2G01810.1 | Symbols: | PHD finger family protein |
chr2:347537-349952 FORWARD
Length = 698
Score = 50 bits (119), Expect = 1e-006
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Frame = +3
Query: 72 LRRGMTTRWNTDRIDNAELALFEILKEKGASFERPVPRAELRVSARRRIGDTGLLDHLLK 251
L R +RW R+++A A+ ++ KE+ ++ + R +LR + R IGDTGL+D LLK
Sbjct: 366 LSRREHSRWPGRRLNDAAQAVLKVFKERNST----ISRQDLREAVRSSIGDTGLIDFLLK 421
Query: 252 HID 260
HID
Sbjct: 422 HID 424
>TAIR9_protein||AT1G66170.1 | Symbols: MMD1 | MMD1 (MALE MEIOCYTE DEATH 1); DNA
binding / protein binding / zinc ion binding | chr1:24638793-24641222
REVERSE
Length = 705
Score = 48 bits (113), Expect = 6e-006
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 15 KSSESSSSSLLDKQKQKTCLRRGMTTRWNTDRIDNAELALFEILKEKGASFERPVPRAEL 194
K S+ + + K + + + + +RW R+ A + E LKE A + + R ++
Sbjct: 315 KKSDVADNDKSPKYRNYSTVAANLGSRWPVRRLIFAAEVIVESLKEMKALKQNGMTRQDV 374
Query: 195 RVSARRRIGDTGLLDHLLKHIDGNVTPG 278
R SAR IGDTGLLD++LK ++ NV G
Sbjct: 375 RDSARLHIGDTGLLDYVLKSMN-NVVVG 401
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,791,476,429
Number of Sequences: 33410
Number of Extensions: 31791476429
Number of Successful Extensions: 1065852704
Number of sequences better than 0.0: 0
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