BLASTX 7.6.2
Query= UN73385 /QuerySize=738
(737 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G30930.1 | Symbols: NFD1 | NFD1 (NUCLEAR FUSIO... 195 3e-050
>TAIR9_protein||AT4G30930.1 | Symbols: NFD1 | NFD1 (NUCLEAR FUSION DEFECTIVE 1);
RNA binding / structural constituent of ribosome |
chr4:15050170-15051630 REVERSE
Length = 271
Score = 195 bits (494), Expect = 3e-050
Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 6/122 (4%)
Frame = -1
Query: 719 TNDTDESSEGEDDDDD--EDYEDSAEMEVEREYSPAEKVEAAAEIGYKVMGPLKPSERLF 546
T++ +ESSEGEDDD++ ED+EDSA+MEVEREYSPAEKVE A EIGYKVMGPLKPSERLF
Sbjct: 75 TDEDEESSEGEDDDEEEGEDFEDSADMEVEREYSPAEKVEEAEEIGYKVMGPLKPSERLF 134
Query: 545 KPYEPVFAVVQIGSHQFKVSNGDSIFTEKLKFCDINDKLVLTKVLLLGSFSKRNEGRIIG 366
KPYEPVFA+VQIGSHQFKVSNGDSIFTEKLKFCDINDKL LTKVLLLGS S+ IIG
Sbjct: 135 KPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQ----TIIG 190
Query: 365 EP 360
P
Sbjct: 191 RP 192
Score = 94 bits (231), Expect = 1e-019
Identities = 47/59 (79%), Positives = 48/59 (81%)
Frame = -3
Query: 402 LIFKKKRRKNYRRTTGHRQELTKLRITDIQGIEKPETPIVHKPFKAADAEQPEPELVG* 226
LIFKKKRRKNYRRT GHRQELTKLRITDIQGIEKPE IVHKP K A EQ + ELV *
Sbjct: 213 LIFKKKRRKNYRRTRGHRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA* 271
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,971,698,103
Number of Sequences: 33410
Number of Extensions: 31971698103
Number of Successful Extensions: 1071578671
Number of sequences better than 0.0: 0
|