Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN73385


BLASTX 7.6.2

Query= UN73385 /QuerySize=738
        (737 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G30930.1 | Symbols: NFD1 | NFD1 (NUCLEAR FUSIO...    195   3e-050

>TAIR9_protein||AT4G30930.1 | Symbols: NFD1 | NFD1 (NUCLEAR FUSION DEFECTIVE 1);
        RNA binding / structural constituent of ribosome |
        chr4:15050170-15051630 REVERSE

          Length = 271

 Score =  195 bits (494), Expect = 3e-050
 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 6/122 (4%)
 Frame = -1

Query: 719 TNDTDESSEGEDDDDD--EDYEDSAEMEVEREYSPAEKVEAAAEIGYKVMGPLKPSERLF 546
           T++ +ESSEGEDDD++  ED+EDSA+MEVEREYSPAEKVE A EIGYKVMGPLKPSERLF
Sbjct:  75 TDEDEESSEGEDDDEEEGEDFEDSADMEVEREYSPAEKVEEAEEIGYKVMGPLKPSERLF 134

Query: 545 KPYEPVFAVVQIGSHQFKVSNGDSIFTEKLKFCDINDKLVLTKVLLLGSFSKRNEGRIIG 366
           KPYEPVFA+VQIGSHQFKVSNGDSIFTEKLKFCDINDKL LTKVLLLGS S+     IIG
Sbjct: 135 KPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQ----TIIG 190

Query: 365 EP 360
            P
Sbjct: 191 RP 192


 Score =  94 bits (231), Expect = 1e-019
 Identities = 47/59 (79%), Positives = 48/59 (81%)
 Frame = -3

Query: 402 LIFKKKRRKNYRRTTGHRQELTKLRITDIQGIEKPETPIVHKPFKAADAEQPEPELVG* 226
           LIFKKKRRKNYRRT GHRQELTKLRITDIQGIEKPE  IVHKP K A  EQ + ELV *
Sbjct: 213 LIFKKKRRKNYRRTRGHRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA* 271

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,971,698,103
Number of Sequences: 33410
Number of Extensions: 31971698103
Number of Successful Extensions: 1071578671
Number of sequences better than 0.0: 0