BLASTX 7.6.2
Query= UN73449 /QuerySize=702
(701 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297797375|ref|XP_002866572.1| IBR domain-containing protein [... 169 3e-040
gi|297797379|ref|XP_002866574.1| IBR domain-containing protein [... 169 5e-040
gi|15242882|ref|NP_201178.1| putative E3 ubiquitin-protein ligas... 168 1e-039
gi|15242886|ref|NP_201180.1| putative E3 ubiquitin-protein ligas... 164 2e-038
gi|10177057|dbj|BAB10469.1| unnamed protein product [Arabidopsis... 108 1e-021
gi|42568741|ref|NP_201181.2| putative E3 ubiquitin-protein ligas... 108 1e-021
gi|297797381|ref|XP_002866575.1| IBR domain-containing protein [... 92 6e-017
gi|15242884|ref|NP_201179.1| zinc finger-related protein [Arabid... 78 1e-012
gi|297810993|ref|XP_002873380.1| IBR domain-containing protein [... 74 1e-011
gi|297789565|ref|XP_002862735.1| predicted protein [Arabidopsis ... 70 2e-010
gi|22326679|ref|NP_680158.1| putative E3 ubiquitin-protein ligas... 70 2e-010
>gi|297797375|ref|XP_002866572.1| IBR domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 506
Score = 169 bits (428), Expect = 3e-040
Identities = 91/159 (57%), Positives = 113/159 (71%), Gaps = 7/159 (4%)
Frame = +2
Query: 146 DDDIQRPYSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQEN 325
+ D +PYSV TR+++ KM KQIN+IS+IF +S SDATVLLM LRW+S +SERL +
Sbjct: 2 EHDRGKPYSVLTRNEISVKMKKQINEISDIFFISKSDATVLLMYLRWDSLRVSERLGENK 61
Query: 326 KKLLSESGLKPVVTDTKKDLSD--SSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWS 499
+KLL +SGL+ VV D D S S + YEF DDDD+ STPFCSHK+ TTYW
Sbjct: 62 EKLLMDSGLESVVIDPNPDSSSEISLETDVYEF----ADDDDL-ISTPFCSHKFDTTYWR 116
Query: 500 KYLEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTVK 616
+YLEKNF+ V+K ISCP QDC +AVG DTIEKLTV+
Sbjct: 117 EYLEKNFYYVEKIQTAISCPDQDCRSAVGPDTIEKLTVR 155
>gi|297797379|ref|XP_002866574.1| IBR domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 518
Score = 169 bits (426), Expect = 5e-040
Identities = 86/157 (54%), Positives = 112/157 (71%), Gaps = 4/157 (2%)
Frame = +2
Query: 146 DDDIQRPYSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQEN 325
++D + PYSV TRD+L+EKM KQI +ISEIF +S SDATVLLM LRW+S +S+ L +
Sbjct: 2 ENDREGPYSVLTRDELREKMEKQIAEISEIFSLSKSDATVLLMFLRWDSHRVSDCLVENK 61
Query: 326 KKLLSESGLKPVVTDTKKDLSDSSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWSKY 505
+K+LSESGLKPVV + ++LS+ SC ++ DDDD STP+CSH + + W KY
Sbjct: 62 EKVLSESGLKPVVANPNQELSNISCGICFK----TCDDDDYLISTPYCSHMFCKSCWRKY 117
Query: 506 LEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTVK 616
L KNF+ V+K ISCPH C AAVG DTI+KLTV+
Sbjct: 118 LGKNFYLVEKNQTRISCPHPACQAAVGPDTIQKLTVR 154
>gi|15242882|ref|NP_201178.1| putative E3 ubiquitin-protein ligase ARI14
[Arabidopsis thaliana]
Length = 506
Score = 168 bits (423), Expect = 1e-039
Identities = 94/182 (51%), Positives = 118/182 (64%), Gaps = 9/182 (4%)
Frame = +2
Query: 152 DIQRPYSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQENKK 331
D +RPYSV TR+++ KM KQIN+IS+IF +SNSDATVLLM LRW+S +SERL + +K
Sbjct: 4 DGRRPYSVLTRNEITVKMKKQINEISDIFFISNSDATVLLMYLRWDSLRVSERLGENKEK 63
Query: 332 LLSESGLKPVVTDTKKDLSD--SSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWSKY 505
LL +SGLK V+ D D S S + YEF D D+ S PFCSHK+ + YW +Y
Sbjct: 64 LLMDSGLKSVMIDPSPDSSSEISLETDVYEF-----DGDNDLISMPFCSHKFDSKYWREY 118
Query: 506 LEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTVKIKIGTMSIFWD--LTSGTQRQIK 679
LEKNF+ V+K TISCP QDC +AVG DTIEKLTV+ + W + IK
Sbjct: 119 LEKNFYYVEKIQTTISCPDQDCRSAVGPDTIEKLTVRDQEMYERYIWRSYIEGNKVLMIK 178
Query: 680 QC 685
QC
Sbjct: 179 QC 180
>gi|15242886|ref|NP_201180.1| putative E3 ubiquitin-protein ligase ARI13
[Arabidopsis thaliana]
Length = 536
Score = 164 bits (413), Expect = 2e-038
Identities = 89/157 (56%), Positives = 108/157 (68%), Gaps = 5/157 (3%)
Frame = +2
Query: 146 DDDIQRPYSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQEN 325
+++ + PYSV TRD LK M KQI +ISEIF +S DATVLLM LRW+S +SE L + N
Sbjct: 2 ENNREGPYSVLTRDQLKGNMKKQIAEISEIFSLSKPDATVLLMFLRWDSHEVSEFLVENN 61
Query: 326 KKLLSESGLKPVVTDTKKDL-SDSSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWSK 502
+K+LSESGLKPVV D +DL SSC ++ DD D STPFCSH + + W K
Sbjct: 62 EKVLSESGLKPVVVDPNQDLYKISSCGICFK----TCDDGDYLISTPFCSHMFCKSCWRK 117
Query: 503 YLEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTV 613
YLEKNF+ V+KT ISCPH C AAVG DTI+KLTV
Sbjct: 118 YLEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTV 154
>gi|10177057|dbj|BAB10469.1| unnamed protein product [Arabidopsis thaliana]
Length = 503
Score = 108 bits (268), Expect = 1e-021
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = +2
Query: 326 KKLLSESGLKPVVTDTKKDLSDSSCDEFYEFFDDVNDDDDVKT-----STPFCSHKYSTT 490
+KL++ESGLKPVV D+ +DLS C DD D D V STPFCSHK+
Sbjct: 2 EKLMTESGLKPVVIDSNQDLSRVYCGICSNIGDDDYDGDAVVVDGDLISTPFCSHKFCKA 61
Query: 491 YWSKYLEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTVK 616
WSKYL+KNFFSV+K ISCP +DC AAVG +T+EKLTV+
Sbjct: 62 CWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVR 103
>gi|42568741|ref|NP_201181.2| putative E3 ubiquitin-protein ligase ARI15
[Arabidopsis thaliana]
Length = 452
Score = 108 bits (268), Expect = 1e-021
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = +2
Query: 326 KKLLSESGLKPVVTDTKKDLSDSSCDEFYEFFDDVNDDDDVKT-----STPFCSHKYSTT 490
+KL++ESGLKPVV D+ +DLS C DD D D V STPFCSHK+
Sbjct: 2 EKLMTESGLKPVVIDSNQDLSRVYCGICSNIGDDDYDGDAVVVDGDLISTPFCSHKFCKA 61
Query: 491 YWSKYLEKNFFSVKKTLATISCPHQDCGAAVGRDTIEKLTVK 616
WSKYL+KNFFSV+K ISCP +DC AAVG +T+EKLTV+
Sbjct: 62 CWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVR 103
>gi|297797381|ref|XP_002866575.1| IBR domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 426
Score = 92 bits (227), Expect = 6e-017
Identities = 50/89 (56%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Frame = +2
Query: 350 LKPVVTDTKKDLSDSSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWSKYLEKNFFSV 529
LK VV D+ +DLSD SC + D D + ST CSHK T WS+YLEKNFFSV
Sbjct: 6 LKSVVIDSNQDLSDVSCG----ICSKIGDGDGL-ISTACCSHKLCNTCWSEYLEKNFFSV 60
Query: 530 KKTLATISCPHQDCGAAVGRDTIEKLTVK 616
+K ISCP Q C AAVG DTIEKLTV+
Sbjct: 61 EKNQTAISCPDQSCRAAVGPDTIEKLTVR 89
>gi|15242884|ref|NP_201179.1| zinc finger-related protein [Arabidopsis
thaliana]
Length = 226
Score = 78 bits (190), Expect = 1e-012
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 368 DTKKDLSDSSCDEFYEFFDDVNDDDDVKTSTPFCSHKYSTTYWSKYLEKNFFSVKKTLAT 547
D +D D DE E DD D + STP+C+HK+ T W +YLE NF+S+++ L
Sbjct: 118 DEDEDDDDDDDDENDEECDDEYDSHRL-ISTPYCTHKFCKTCWREYLETNFYSLEENLTV 176
Query: 548 ISCPHQDCGAAVGRDTIEKLTV 613
ISCP QDCGA+V TIEKL V
Sbjct: 177 ISCPDQDCGASVRLKTIEKLGV 198
>gi|297810993|ref|XP_002873380.1| IBR domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 497
Score = 74 bits (181), Expect = 1e-011
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = +2
Query: 422 DDVNDDDDVKTSTPFCSHKYSTTYWSKYLEKNFFSVKKTLATISCPHQDCGAAVGRDTIE 601
D D D STPFCSHK+STT WS+YL K+ ISC +QDC A+VG DTIE
Sbjct: 81 DRETGDGDYLVSTPFCSHKFSTTCWSEYLSDALEKNKEERGLISCLNQDCVASVGPDTIE 140
Query: 602 KLTVKIKI 625
KLT ++K+
Sbjct: 141 KLTEQVKV 148
Score = 64 bits (153), Expect = 2e-008
Identities = 35/82 (42%), Positives = 46/82 (56%)
Frame = +2
Query: 167 YSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQENKKLLSES 346
YSV + ++EKM K+I ISE+F VS SDATV+L+ LRWNS S+ L KK L++
Sbjct: 8 YSVLAKTQVREKMMKEIEQISEVFSVSKSDATVILICLRWNSFKASDLLGDNKKKFLAKL 67
Query: 347 GLKPVVTDTKKDLSDSSCDEFY 412
GL V + D Y
Sbjct: 68 GLVRVFNSNSSSADRETGDGDY 89
>gi|297789565|ref|XP_002862735.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 61
Score = 70 bits (171), Expect = 2e-010
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +2
Query: 146 DDDIQRPYSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSE 307
+ D +PYSV TR+++ KM KQIN+IS+IFC+S SDATVLLM LRW+S +SE
Sbjct: 2 EHDRGKPYSVLTRNEISVKMKKQINEISDIFCISKSDATVLLMYLRWDSLRVSE 55
>gi|22326679|ref|NP_680158.1| putative E3 ubiquitin-protein ligase ARI16
[Arabidopsis thaliana]
Length = 500
Score = 70 bits (170), Expect = 2e-010
Identities = 35/67 (52%), Positives = 41/67 (61%)
Frame = +2
Query: 422 DDVNDDDDVKTSTPFCSHKYSTTYWSKYLEKNFFSVKKTLATISCPHQDCGAAVGRDTIE 601
D D D STPFCSHK+STT WS+YL K+ ISC QDC A+VG DTIE
Sbjct: 81 DRETGDGDYLVSTPFCSHKFSTTCWSEYLSDALKKNKEQRGLISCLSQDCVASVGPDTIE 140
Query: 602 KLTVKIK 622
+LT +K
Sbjct: 141 QLTEPVK 147
Score = 62 bits (150), Expect = 5e-008
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +2
Query: 167 YSVCTRDDLKEKMNKQINDISEIFCVSNSDATVLLMKLRWNSQLLSERLCQENKKLLSES 346
YSV + ++EKM K+I ISE+F VS SDATV+L++L WNS S+ L +K L++
Sbjct: 8 YSVLAKTQVREKMMKEIEQISEVFLVSKSDATVILIRLGWNSFKASDLLGDNKEKFLAKL 67
Query: 347 GLKPVVTDTKKDLSDSSCDEFY 412
GL V+ + D Y
Sbjct: 68 GLARVLNSNSSSADRETGDGDY 89
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 712,985,795,410
Number of Sequences: 15229318
Number of Extensions: 712985795410
Number of Successful Extensions: 229498679
Number of sequences better than 0.0: 0
|
