BLASTX 7.6.2
Query= UN73450 /QuerySize=732
(731 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase... 372 3e-101
gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arab... 361 1e-097
gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT... 352 5e-095
gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA heli... 263 2e-068
gi|225439904|ref|XP_002279705.1| PREDICTED: hypothetical protein... 246 3e-063
gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vini... 246 3e-063
gi|224127806|ref|XP_002329182.1| predicted protein [Populus tric... 242 4e-062
gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japo... 217 1e-054
gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryz... 217 1e-054
gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT... 188 9e-046
gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrel... 151 2e-034
gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT... 146 5e-033
gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT... 146 5e-033
gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-depende... 140 2e-031
gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-depende... 137 2e-030
gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-depende... 136 4e-030
gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-depende... 135 7e-030
gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta] 132 7e-029
gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni] 131 1e-028
gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba] 129 6e-028
>gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase 57
[Arabidopsis thaliana]
Length = 541
Score = 372 bits (955), Expect = 3e-101
Identities = 189/232 (81%), Positives = 208/232 (89%), Gaps = 5/232 (2%)
Frame = +3
Query: 42 EKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEE--EEPEQEQRV 215
EKS FLFGGTNFN+KKFAPDFAKFKN +DDD NKK++FF ++EE E+PE E+ +
Sbjct: 2 EKSSYFLFGGTNFNKKKFAPDFAKFKN---STEDDDSNKKVNFFVEEEEDTEQPEAEKVI 58
Query: 216 SSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDAL 395
SSKKRKR+S+NS PVEGFDVFKSSKK+R+KGK EQ TK+E +ENPKKEL RQMERDAL
Sbjct: 59 VSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 396 SRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSG 575
SRKQY+IHVSGNNIP PLKSF ELS+RYGC+ YILRNLAELGFKEPTPIQRQAIP+LLSG
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 576 RECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREG 731
RECFACAPTGSGKTFAFICPMLIKLKR STDGIRAVILSPARELAAQTAREG
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREG 230
>gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arabidopsis
thaliana]
Length = 545
Score = 361 bits (924), Expect = 1e-097
Identities = 186/233 (79%), Positives = 205/233 (87%), Gaps = 9/233 (3%)
Frame = +3
Query: 42 EKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEE--EEPEQEQRV 215
EKS FLFGGTNFN+KKFAPDFAKFKN +DDD NKK++FF ++EE E+PE E+ +
Sbjct: 2 EKSSYFLFGGTNFNKKKFAPDFAKFKN---STEDDDSNKKVNFFVEEEEDTEQPEAEKVI 58
Query: 216 SSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDAL 395
SSKKRKR+S+NS PVEGFDVFKSSKK+R+KGK EQ TK+E +ENPKKEL RQMERDAL
Sbjct: 59 VSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 396 SRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSG 575
SRKQY+IHVSGNNIP PLKSF ELS+RYGC+ YILRNLAELGFKEPTPIQRQAIP+LLSG
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 576 RECFACAPTGSGKTFAFICPMLIKLK----RHSTDGIRAVILSPARELAAQTA 722
RECFACAPTGSGKTFAFICPMLIKLK R STDGIRAVILSPARELAAQTA
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLKVLNCRPSTDGIRAVILSPARELAAQTA 231
>gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT_478294
[Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 352 bits (901), Expect = 5e-095
Identities = 177/225 (78%), Positives = 198/225 (88%), Gaps = 3/225 (1%)
Frame = +3
Query: 57 FLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRK 236
FLFGGTNFN+KKFAPDFAKFKN +DDD NKK++FF ++E+ E ++E+ V SKKRK
Sbjct: 7 FLFGGTNFNKKKFAPDFAKFKNC---TEDDDSNKKVNFFVEEEDTEEQKEKVVVFSKKRK 63
Query: 237 RKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNI 416
R+S+NS PVEGFDVFKSSKK+ +KGK E TK++ LE+PKKEL RQ+ERDALSRKQYNI
Sbjct: 64 RRSSNSVPVEGFDVFKSSKKALAKGKAEEGNTKNDILEDPKKELNRQIERDALSRKQYNI 123
Query: 417 HVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACA 596
HVSGNNIP PLKSF ELS+RYGC+ YIL NLAELGFKEPTPIQRQAIP+LLSGRECFACA
Sbjct: 124 HVSGNNIPPPLKSFAELSSRYGCEGYILGNLAELGFKEPTPIQRQAIPILLSGRECFACA 183
Query: 597 PTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREG 731
PTGSGKT AFICPMLIKLK STDGIRAVILSPARELAAQTAREG
Sbjct: 184 PTGSGKTVAFICPMLIKLKHPSTDGIRAVILSPARELAAQTAREG 228
>gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative
[Ricinus communis]
Length = 535
Score = 263 bits (671), Expect = 2e-068
Identities = 140/226 (61%), Positives = 169/226 (74%), Gaps = 5/226 (2%)
Frame = +3
Query: 54 NFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKR 233
+FLF G FN+KKFA DF++FK +K E +D+ Q L E + EP+Q S KKR
Sbjct: 6 SFLFAGITFNKKKFATDFSRFKEKK-ECNDNAQTDDLRLLE-AGKSEPDQVH--VSVKKR 61
Query: 234 KRKS-ANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQY 410
KRK+ A+SE VEGF+VFKSSK + + + + KEL +Q+ERDAL RK +
Sbjct: 62 KRKNVASSEKVEGFNVFKSSKSVALPSNQQNDQDEIDQPFRKNKELNKQIERDALLRKHF 121
Query: 411 NIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFA 590
+IHVSGNNIPSPL++F+ELS+RYGC+ Y+L NL ELGFKEPTPIQRQAIPVLLSGRECFA
Sbjct: 122 HIHVSGNNIPSPLQNFSELSSRYGCESYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFA 181
Query: 591 CAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
CAPTGSGKT AF+CPML+KLK S DGIRAVIL P RELA+QT RE
Sbjct: 182 CAPTGSGKTLAFVCPMLMKLKHSSKDGIRAVILCPTRELASQTTRE 227
>gi|225439904|ref|XP_002279705.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 524
Score = 246 bits (627), Expect = 3e-063
Identities = 127/205 (61%), Positives = 154/205 (75%), Gaps = 2/205 (0%)
Frame = +3
Query: 114 FKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSK 293
F +K D +K + E + E E+ KKRKRK+ ++PVEGF+VFK+SK
Sbjct: 14 FDKKKFAADFSRFKEKKESDDLVESGKSEAEEGARPVKKRKRKATVADPVEGFNVFKTSK 73
Query: 294 KSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELST 473
S ++ +QE + L KKEL RQ+ERDAL RK++ IH+SGNN+PSPL++F+ELS+
Sbjct: 74 SSAQGIQQNDQEKSE--LSQAKKELNRQIERDALLRKKHKIHISGNNVPSPLENFSELSS 131
Query: 474 RYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLK 653
RYGC+ Y+L NLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKT AF+CPML+KLK
Sbjct: 132 RYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMKLK 191
Query: 654 RHSTDGIRAVILSPARELAAQTARE 728
S DGIRAVIL P RELAAQTARE
Sbjct: 192 HASKDGIRAVILCPTRELAAQTARE 216
>gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 246 bits (627), Expect = 3e-063
Identities = 126/196 (64%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = +3
Query: 141 DDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEV 320
D + KK + E + E E+ KKRKRK+ ++PVEGF+VFK+SK S ++
Sbjct: 22 DFSRFKKKESDDLVESGKSEAEEGARPVKKRKRKATVADPVEGFNVFKTSKSSAQGIQQN 81
Query: 321 EQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYIL 500
+QE + L KKEL RQ+ERDAL RK++ IH+SGNN+PSPL++F+ELS+RYGC+ Y+L
Sbjct: 82 DQEKSE--LSQAKKELNRQIERDALLRKKHKIHISGNNVPSPLENFSELSSRYGCESYLL 139
Query: 501 RNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRA 680
NLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKT AF+CPML+KLK S DGIRA
Sbjct: 140 HNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRA 199
Query: 681 VILSPARELAAQTARE 728
VIL P RELAAQTARE
Sbjct: 200 VILCPTRELAAQTARE 215
>gi|224127806|ref|XP_002329182.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 242 bits (617), Expect = 4e-062
Identities = 133/220 (60%), Positives = 160/220 (72%), Gaps = 9/220 (4%)
Frame = +3
Query: 69 GTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSA 248
G FN+K+FA DF++FK RK +DD + LS+F++++ E ++ VS +KKRKRK+
Sbjct: 11 GIKFNKKRFAGDFSRFKKRKQRNDDSPVD-DLSYFKREDTE--AEKVVVSVNKKRKRKT- 66
Query: 249 NSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSG 428
+E VEGF VFK S V + E EN +KEL RQ ERD RK+Y IHVSG
Sbjct: 67 KAERVEGFSVFKG-----SDSVPVVTDEGSEQEENNQKELNRQNERDLRLRKKYGIHVSG 121
Query: 429 NNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGS 608
NN+PSPL+SF ELSTRYGC+ Y+L NL +LGFKEPTPIQRQAIPVLLSGRECFA APTGS
Sbjct: 122 NNVPSPLQSFAELSTRYGCESYLLHNLVKLGFKEPTPIQRQAIPVLLSGRECFAKAPTGS 181
Query: 609 GKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
GKT AF+ PML+KLK+ S DGIR VIL RELAAQT RE
Sbjct: 182 GKTLAFVYPMLMKLKQPSKDGIRTVILCHTRELAAQTTRE 221
>gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
Length = 540
Score = 217 bits (552), Expect = 1e-054
Identities = 115/239 (48%), Positives = 168/239 (70%), Gaps = 11/239 (4%)
Frame = +3
Query: 30 LEKMEKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQ 209
+EK + S + LF GT+F+RK+FA DFA+F+ D + +++ + + +
Sbjct: 1 MEKAKLS-SALFAGTHFDRKRFAGDFARFRQGPPAPD----VASAAAPSPEKKRKRQSKA 55
Query: 210 RVSSSKKRKRKSAN--SEPVEGFDVFK---SSKKSRSKGKEVEQ-ETKDETLENPKKELY 371
+ SKKR+ + A+ S+ VEGF VFK + K K+VE +++D + +KE+
Sbjct: 56 KAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVE 115
Query: 372 RQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQ 551
R++ER A+ RK+++IH+SG N+P+PL++F EL +RYGC Y++ NL++LGF+EPTPIQRQ
Sbjct: 116 REIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQ 175
Query: 552 AIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
AIP+LLSGRECFACAPTGSGKT AF+ P+L+K+K S +G++AVIL P RELAAQT RE
Sbjct: 176 AIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRE 234
>gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica
Group]
Length = 540
Score = 217 bits (552), Expect = 1e-054
Identities = 115/239 (48%), Positives = 168/239 (70%), Gaps = 11/239 (4%)
Frame = +3
Query: 30 LEKMEKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQ 209
+EK + S + LF GT+F+RK+FA DFA+F+ D + +++ + + +
Sbjct: 1 MEKAKLS-SALFAGTHFDRKRFAGDFARFRQGPPAPD----VASAAAPSPEKKRKRQSKA 55
Query: 210 RVSSSKKRKRKSAN--SEPVEGFDVFK---SSKKSRSKGKEVEQ-ETKDETLENPKKELY 371
+ SKKR+ + A+ S+ VEGF VFK + K K+VE +++D + +KE+
Sbjct: 56 KAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVE 115
Query: 372 RQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQ 551
R++ER A+ RK+++IH+SG N+P+PL++F EL +RYGC Y++ NL++LGF+EPTPIQRQ
Sbjct: 116 REIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQ 175
Query: 552 AIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
AIP+LLSGRECFACAPTGSGKT AF+ P+L+K+K S +G++AVIL P RELAAQT RE
Sbjct: 176 AIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRE 234
>gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390
[Sorghum bicolor]
Length = 546
Score = 188 bits (476), Expect = 9e-046
Identities = 95/190 (50%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Frame = +3
Query: 174 EQQEEEEPEQEQRVSSSKKRKR--KSANSEPVEGFDVFKSSKKSRSK--GKEVE-QETKD 338
E++ + + + + + KKR +A+S VEGF VFK S ++ ++V+ ++ +D
Sbjct: 51 EKKRKRKSGKAKAKKNKKKRAEDAAAASSNVVEGFSVFKGLADSNAELPSEKVDMRKDED 110
Query: 339 ETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAEL 518
+KE+ R++ER A+ RK+++IH++G N P+PL+SF EL +RYGC Y++ NL++L
Sbjct: 111 SVAVRQRKEIEREIERAAVLRKRFDIHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKL 170
Query: 519 GFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPA 698
GF+EPTPIQRQA+P+LLSGRECFACAPTGSGKT AF+ P+L+K+K S G++AVIL P
Sbjct: 171 GFQEPTPIQRQAMPILLSGRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPT 230
Query: 699 RELAAQTARE 728
RELAAQT RE
Sbjct: 231 RELAAQTVRE 240
>gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 405
Score = 151 bits (379), Expect = 2e-034
Identities = 69/112 (61%), Positives = 90/112 (80%)
Frame = +3
Query: 393 LSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLS 572
LSRK+Y IHVSG ++P+PL +F +L T+Y C+KY+++N+ E G+ EPTPIQRQAI LL+
Sbjct: 1 LSRKKYQIHVSGRDVPAPLVAFEQLRTQYRCRKYLMKNIKEAGYTEPTPIQRQAITTLLA 60
Query: 573 GRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
RECFACAPTGSGKT AF P+L+KL+ S +G+RA++L P RELA QT RE
Sbjct: 61 ERECFACAPTGSGKTLAFSLPILMKLRVPSKEGLRALVLCPTRELALQTTRE 112
>gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT_124676
[Selaginella moellendorffii]
Length = 415
Score = 146 bits (366), Expect = 5e-033
Identities = 67/110 (60%), Positives = 85/110 (77%)
Frame = +3
Query: 399 RKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGR 578
+K+ I +G+N+P PL+SF +LS+ Y C+ +++NL E G+KEPTP+QRQ IPVLL R
Sbjct: 2 KKKLKIRAAGDNVPQPLRSFQQLSSEYDCEPNLIKNLVEAGYKEPTPVQRQVIPVLLQER 61
Query: 579 ECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
ECF CAPTGSGK+ AFI P+L+KLK+ S DGIRAVIL P RELAAQ E
Sbjct: 62 ECFVCAPTGSGKSLAFILPILMKLKKSSPDGIRAVILCPTRELAAQLITE 111
>gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT_410231
[Selaginella moellendorffii]
Length = 449
Score = 146 bits (366), Expect = 5e-033
Identities = 67/110 (60%), Positives = 85/110 (77%)
Frame = +3
Query: 399 RKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGR 578
+K+ I +G+N+P PL+SF +LS+ Y C+ +++NL E G+KEPTP+QRQ IPVLL R
Sbjct: 54 KKKLKIRAAGDNVPQPLRSFQQLSSEYDCEPNLMKNLVEAGYKEPTPVQRQVIPVLLQER 113
Query: 579 ECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
ECF CAPTGSGK+ AFI P+L+KLK+ S DGIRAVIL P RELAAQ E
Sbjct: 114 ECFVCAPTGSGKSLAFILPILMKLKKSSPDGIRAVILCPTRELAAQLITE 163
>gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-dependent RNA helicase
DDX52 isoform 1 [Monodelphis domestica]
Length = 604
Score = 140 bits (352), Expect = 2e-031
Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 16/228 (7%)
Frame = +3
Query: 75 NFNRKKFAPDFAKFKNRKA------EDDDDDQNKKLSFFEQQEEEEPEQ--EQRVSSSKK 230
+F+ + D F N+K+ DD +K +Q+ E E + E++ +KK
Sbjct: 36 DFDSSEVLEDLNFFGNKKSTLAENITSLDDTLSKGEERLQQKAEHEEDNRIERKRKGNKK 95
Query: 231 RKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETK--DETLENPKKELYRQMERDALSRK 404
+K+ S E + SS +++ K K+ +E K E LE +KE + R
Sbjct: 96 KKQSSGYPSKEEDTIQWTSSLEAKIKNKKGNEENKVTAEKLERLRKEKINRF------RN 149
Query: 405 QYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGREC 584
++ IH+ G ++P P+ SF +L Y +L+N+ GF+ PTPIQ QAIPV+L GRE
Sbjct: 150 KHRIHIQGTDLPEPIASFQQLDQEYKIHSRLLQNILNAGFQNPTPIQMQAIPVMLHGREL 209
Query: 585 FACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
A APTGSGKT AF P+L++LK+ + G RA+I+SP RELA+QT RE
Sbjct: 210 LASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQTHRE 257
>gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-dependent RNA helicase
DDX52 isoform 2 [Monodelphis domestica]
Length = 608
Score = 137 bits (344), Expect = 2e-030
Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
Frame = +3
Query: 180 QEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFK--------SSKKSRSKGKEVEQETK 335
Q++ E E++ R+ +K +K S F K SS +++ K K+ +E K
Sbjct: 75 QQKAEHEEDNRIERKRKGNKKKKQSSETISFSPSKEEDTIQWTSSLEAKIKNKKGNEENK 134
Query: 336 --DETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNL 509
E LE +KE + R ++ IH+ G ++P P+ SF +L Y +L+N+
Sbjct: 135 VTAEKLERLRKEKINRF------RNKHRIHIQGTDLPEPIASFQQLDQEYKIHSRLLQNI 188
Query: 510 AELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVIL 689
GF+ PTPIQ QAIPV+L GRE A APTGSGKT AF P+L++LK+ + G RA+I+
Sbjct: 189 LNAGFQNPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII 248
Query: 690 SPARELAAQTARE 728
SP RELA+QT RE
Sbjct: 249 SPTRELASQTHRE 261
>gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-dependent RNA helicase
DDX52-like [Nasonia vitripennis]
Length = 643
Score = 136 bits (341), Expect = 4e-030
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 6/223 (2%)
Frame = +3
Query: 60 LFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKR 239
L G+ FN K+F D +F K Q K++ + +EEP++ + SS +K +
Sbjct: 10 LSSGSKFNLKRFHKDAERFLLTK----KPVQKKEVKIKTEPVDEEPKETVK-SSKRKHED 64
Query: 240 KSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIH 419
+ E + G + + K + + + KK L + E+ R +++I
Sbjct: 65 EDDAKEQQSNVLTLLGGISAGEDGTVIRPKKKKKVMTDDKK-LKLEQEKINQYRNKHHIS 123
Query: 420 VSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAP 599
V+G+++P P++SF +LST + IL+N+ G+ +PTPIQ QAIPV+L GR+ ACAP
Sbjct: 124 VTGSHVPEPIESFEQLSTEFKIGSDILQNMRTCGYNQPTPIQMQAIPVMLQGRQILACAP 183
Query: 600 TGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
TGSGKT +F+ P++ +L G RA+ILSP RELA QT RE
Sbjct: 184 TGSGKTASFLLPIIHQLNGPRKKGFRAIILSPTRELAKQTYRE 226
>gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-dependent RNA helicase
DDX52-like [Saccoglossus kowalevskii]
Length = 681
Score = 135 bits (339), Expect = 7e-030
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 4/198 (2%)
Frame = +3
Query: 147 DQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEV-- 320
D N +L+ E + + + +K+K+K +E G + ++ + ++
Sbjct: 60 DVNSELAAENSPERPKRKIIEEAHVERKKKKKKTITESHSGAENTENFSAANLDDVQLLS 119
Query: 321 --EQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKY 494
+ E K+E NPKK + E+ RK++ IH+SG +IP P+ SF +L Y
Sbjct: 120 SWKPENKEEKKMNPKKIEQIRREKVNAFRKKHKIHISGTDIPDPIDSFQQLKQEYKINST 179
Query: 495 ILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGI 674
IL+N+ ++G++ PTPIQ Q +P++L RE ACAPTGSGKT AFI P+L LK G
Sbjct: 180 ILKNVEDVGYQSPTPIQMQTLPLMLHRREVLACAPTGSGKTAAFIIPVLHHLKEPRKQGF 239
Query: 675 RAVILSPARELAAQTARE 728
RAV++SP RELA QT RE
Sbjct: 240 RAVVVSPTRELAQQTYRE 257
>gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta]
Length = 592
Score = 132 bits (330), Expect = 7e-029
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
Frame = +3
Query: 168 FFEQQEEEEPEQEQ---RVSSSKKR-KRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETK 335
F ++ ++E P Q VS +K K++ ++ + V+ F+ + S + ++ K
Sbjct: 16 FTKKSKKEPPSNPQPRLEVSRHEKPVKKEESDKDSVDDTTEFRLLDGASSNKPKRKKHKK 75
Query: 336 DETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAE 515
++TL + EL R ++ +RKQY I V G N+P P+ SF+ L+ + + NL
Sbjct: 76 EKTLSPKELELQRAVDEANETRKQYGISVLGKNVPPPVASFSSLTKDFKMLPRLQLNLLS 135
Query: 516 LGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSP 695
F PTPIQ QA+PVLL GR ACAPTGSGKT AF+ P++ L+ H T G+RA++L+P
Sbjct: 136 RNFDRPTPIQMQALPVLLQGRALMACAPTGSGKTLAFLTPIINGLRAHRTSGLRALVLAP 195
Query: 696 ARELAAQTARE 728
RELA Q RE
Sbjct: 196 TRELAQQIYRE 206
>gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni]
Length = 541
Score = 131 bits (329), Expect = 1e-028
Identities = 78/192 (40%), Positives = 114/192 (59%), Gaps = 6/192 (3%)
Frame = +3
Query: 153 NKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQET 332
NK + E+ E E + +V K+ +KS S E + +S+ S+SK ++ +++
Sbjct: 24 NKPNACSEKSTTLEAETQPQV----KKAKKSDESTTSEFRLLADNSQNSQSKAQKNKKKA 79
Query: 333 KDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLA 512
K+ T E +KE +Q R RK +NI V G +IP P+ +F EL + + +NL
Sbjct: 80 KELTPE--EKERLQQEARVNELRKNHNISVLGKDIPPPINNFDELQQEFQLLPRLHQNLQ 137
Query: 513 ELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILS 692
GF++PTPIQ QA+PV+L R ACAPTGSGKT AF+ P++ L+ H T GIRA++L+
Sbjct: 138 SYGFQQPTPIQMQALPVMLRNRALMACAPTGSGKTLAFLTPIINGLRSHQTSGIRALVLA 197
Query: 693 PARELAAQTARE 728
P RELA Q RE
Sbjct: 198 PTRELAQQIYRE 209
>gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba]
Length = 594
Score = 129 bits (322), Expect = 6e-028
Identities = 72/191 (37%), Positives = 105/191 (54%)
Frame = +3
Query: 156 KKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETK 335
KK Q+ +P+ VS +K + + + E F+ + S + ++ K
Sbjct: 18 KKSKKVPPQKTAQPQPRLEVSKHEKPAKNEESDKDDEDSTEFRLLDGAFSNQPKRKKPKK 77
Query: 336 DETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAE 515
++TL + EL R ++ +RKQY I V G N+P P+ SF L+ + + +NL
Sbjct: 78 EKTLSPKELELQRAVDEANETRKQYGISVLGKNVPPPVDSFGSLTKDFKMLPRLQQNLLS 137
Query: 516 LGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSP 695
F PTPIQ QA+PVLL R ACAPTGSGKT AF+ P++ LK H T G+R+++L+P
Sbjct: 138 RNFDRPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLKVHKTSGLRSLVLAP 197
Query: 696 ARELAAQTARE 728
RELA Q RE
Sbjct: 198 TRELAQQIYRE 208
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 712,985,795,410
Number of Sequences: 15229318
Number of Extensions: 712985795410
Number of Successful Extensions: 229498679
Number of sequences better than 0.0: 0
|
