BLASTX 7.6.2
Query= UN73450 /QuerySize=732
(731 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=A... 372 1e-102
sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=O... 217 6e-056
sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 ... 136 2e-031
sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 ... 134 5e-031
sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS... 134 5e-031
sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 ... 133 2e-030
sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 ... 132 4e-030
sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryom... 115 4e-025
sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyvero... 115 4e-025
sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Pichia g... 112 3e-024
sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida ... 110 1e-023
sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwa... 109 3e-023
sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia... 108 5e-023
sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderom... 107 7e-023
sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharo... 106 2e-022
sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharo... 105 4e-022
sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Pichia... 103 2e-021
sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida ... 102 2e-021
sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candid... 101 9e-021
sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya g... 99 3e-020
>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis
thaliana GN=RH57 PE=2 SV=1
Length = 541
Score = 372 bits (955), Expect = 1e-102
Identities = 189/232 (81%), Positives = 208/232 (89%), Gaps = 5/232 (2%)
Frame = +3
Query: 42 EKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEE--EEPEQEQRV 215
EKS FLFGGTNFN+KKFAPDFAKFKN +DDD NKK++FF ++EE E+PE E+ +
Sbjct: 2 EKSSYFLFGGTNFNKKKFAPDFAKFKN---STEDDDSNKKVNFFVEEEEDTEQPEAEKVI 58
Query: 216 SSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDAL 395
SSKKRKR+S+NS PVEGFDVFKSSKK+R+KGK EQ TK+E +ENPKKEL RQMERDAL
Sbjct: 59 VSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 396 SRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSG 575
SRKQY+IHVSGNNIP PLKSF ELS+RYGC+ YILRNLAELGFKEPTPIQRQAIP+LLSG
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 576 RECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREG 731
RECFACAPTGSGKTFAFICPMLIKLKR STDGIRAVILSPARELAAQTAREG
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREG 230
>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa
subsp. japonica GN=Os07g0647900 PE=2 SV=2
Length = 540
Score = 217 bits (552), Expect = 6e-056
Identities = 115/239 (48%), Positives = 168/239 (70%), Gaps = 11/239 (4%)
Frame = +3
Query: 30 LEKMEKSVNFLFGGTNFNRKKFAPDFAKFKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQ 209
+EK + S + LF GT+F+RK+FA DFA+F+ D + +++ + + +
Sbjct: 1 MEKAKLS-SALFAGTHFDRKRFAGDFARFRQGPPAPD----VASAAAPSPEKKRKRQSKA 55
Query: 210 RVSSSKKRKRKSAN--SEPVEGFDVFK---SSKKSRSKGKEVEQ-ETKDETLENPKKELY 371
+ SKKR+ + A+ S+ VEGF VFK + K K+VE +++D + +KE+
Sbjct: 56 KAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVE 115
Query: 372 RQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQ 551
R++ER A+ RK+++IH+SG N+P+PL++F EL +RYGC Y++ NL++LGF+EPTPIQRQ
Sbjct: 116 REIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQ 175
Query: 552 AIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
AIP+LLSGRECFACAPTGSGKT AF+ P+L+K+K S +G++AVIL P RELAAQT RE
Sbjct: 176 AIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRE 234
>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens
GN=DDX52 PE=1 SV=3
Length = 599
Score = 136 bits (341), Expect = 2e-031
Identities = 76/188 (40%), Positives = 117/188 (62%), Gaps = 9/188 (4%)
Frame = +3
Query: 174 EQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDV-FKSSKKSRSKGKEVEQETK--DET 344
E++EE E+++ S K++ S + EG + + SS +++ + K+V++E+K
Sbjct: 72 EKKEESLTERKREQSKKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQRESKLTSGK 131
Query: 345 LENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGF 524
LEN +KE + R ++ IHV G ++P P+ +F +L Y +L+N+ + GF
Sbjct: 132 LENLRKEKINFL------RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGF 185
Query: 525 KEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARE 704
+ PTPIQ QAIPV+L GRE A APTGSGKT AF P+L++LK+ + G RA+I+SP RE
Sbjct: 186 QMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRE 245
Query: 705 LAAQTARE 728
LA+Q RE
Sbjct: 246 LASQIHRE 253
>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52
OS=Dictyostelium discoideum GN=ddx52 PE=3 SV=1
Length = 668
Score = 134 bits (337), Expect = 5e-031
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 19/214 (8%)
Frame = +3
Query: 102 DFAKFKNRKAEDDDDDQN------KKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANSEPV 263
DF + + +DDDDD++ K+ F + Q + E+E +K + + NS+
Sbjct: 86 DFVEDDDNDDDDDDDDEDEENEEPKEKEFIKHQVNNDEEEEDITLFNKSNENE--NSDDS 143
Query: 264 EGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPS 443
+ D K+++K K+V +ET++ + K+E+ A R ++ I V G +IP
Sbjct: 144 DDSD-DSGKNKNKNKNKKVSKETQE---DKHKREI-------ATFRNKHRIKVDGTDIPD 192
Query: 444 PLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFA 623
P+ F++L R+ +KY+L N+ E+G+KEP+PIQ Q IP+LL RE A APTGSGKT +
Sbjct: 193 PMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTAS 252
Query: 624 FICPMLIKLKRHSTDGIRAVILSPARELAAQTAR 725
F P+L L +G R+VI++P RELA Q R
Sbjct: 253 FSIPILQALYEPKKEGFRSVIIAPTRELAQQIYR 286
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus
norvegicus GN=Ddx52 PE=2 SV=1
Length = 598
Score = 134 bits (337), Expect = 5e-031
Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 13/212 (6%)
Frame = +3
Query: 114 FKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANS-----EPVEGFDV 278
F N+K+ D+ + + +E E +R KK+KRK + E ++G
Sbjct: 49 FGNKKSVSDECGGLQTQQELQNEETTEGGLLERSKEPKKKKRKKMTADVPAQEDLDGTIQ 108
Query: 279 FKSSKKSRSKGKEVEQETK--DETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLK 452
+ SS +++ + K+ E K E LE+ +K E+ R ++ IHV G ++P P+
Sbjct: 109 WTSSVEAKLQDKKANGEKKLTSEKLEHLRK------EKINFFRNKHKIHVQGTDLPDPIA 162
Query: 453 SFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFIC 632
+F +L Y +L+N+ + GF+ PTPIQ QAIPV+L GRE A APTGSGKT AF
Sbjct: 163 TFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSI 222
Query: 633 PMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
P+L++LK+ + G RA+++SP RELA+Q RE
Sbjct: 223 PILMQLKQPTNKGFRALVISPTRELASQIHRE 254
>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus
GN=DDX52 PE=2 SV=1
Length = 596
Score = 133 bits (333), Expect = 2e-030
Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 8/189 (4%)
Frame = +3
Query: 174 EQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDV----FKSSKKSRSKGKEVEQETKDE 341
E +EE+ E+ Q + RK+K SE +V + SS +++ + K V+++ K
Sbjct: 67 ELPDEEKTEESQIERKKQNRKKKKITSEITSEEEVSTIQWISSVEAKIEDKNVKRKNK-- 124
Query: 342 TLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELG 521
L + K E R+ E+ R ++ IHV G ++P P+ +F +L Y +L+N+ + G
Sbjct: 125 -LTSGKLEQLRK-EKLNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAG 182
Query: 522 FKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPAR 701
F+ PTPIQ QAIPV+L GRE A APTGSGKT AF P+L+ LK+ + G RA+I+SP R
Sbjct: 183 FQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTR 242
Query: 702 ELAAQTARE 728
ELA+Q RE
Sbjct: 243 ELASQIHRE 251
>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 132 bits (330), Expect = 4e-030
Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Frame = +3
Query: 114 FKNRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSSKKRKRKSANS-----EPVEGFDV 278
F N+K+ D+ + +E+ E +R KK+KRK S E ++G
Sbjct: 49 FGNKKSVSDECGALQIHQEPPNEEKTEGVLLERSKEPKKKKRKKMTSEVPAQEDLDGGIQ 108
Query: 279 FKSSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSF 458
+ SS +++ + ++V E K L + K E R+ E+ R ++ IHV G ++P P+ +F
Sbjct: 109 WTSSVEAKLQEEKVSGEKK---LTSGKLEHLRK-EKVNFFRNKHKIHVQGTDLPDPIATF 164
Query: 459 TELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPM 638
+L Y +L+N+ + GF+ PTPIQ QAIPV+L GRE A APTGSGKT AF P+
Sbjct: 165 QQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPI 224
Query: 639 LIKLKRHSTDGIRAVILSPARELAAQTARE 728
L++LK+ + G RA+++SP RELA+Q RE
Sbjct: 225 LMQLKQPTNKGFRALVISPTRELASQIHRE 254
>sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii
GN=ROK1 PE=3 SV=2
Length = 550
Score = 115 bits (286), Expect = 4e-025
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Frame = +3
Query: 195 PEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLENPKKELYR 374
P ++Q V ++K+K ++ S + D F + K + K E + + ++ +E+ L
Sbjct: 26 PSRKQFV--NEKQKEENLKSVVDKEVDFFHTKKHTSHKETEKKNDEGEDEIEDEVPPLTI 83
Query: 375 QMERDALS-RKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQ 551
+ DA RK VSG +IP P+ SF +L RY K +L NL + GF EPTPIQ +
Sbjct: 84 SSDDDARKLRKLNKSKVSGEDIPLPIGSFEDLIGRYKLDKKLLSNLIDAGFTEPTPIQDE 143
Query: 552 AIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTD----GIRAVILSPARELAAQ 716
AIP+ L GR+ ACAPTGSGKT AF+ P++ + + + + GIR +I+SP ELA Q
Sbjct: 144 AIPISLEGRDLIACAPTGSGKTLAFLIPLVQTILQSNPNVKNYGIRGLIISPTNELAVQ 202
>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis
GN=ROK1 PE=3 SV=1
Length = 579
Score = 115 bits (286), Expect = 4e-025
Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 14/206 (6%)
Frame = +3
Query: 120 NRKAEDDDDDQNKKLSFFEQQEEEEPEQEQRVSSS-----KKRKRKSANSEPVEGFDVFK 284
NR D N+K S EQ+++ K+ SE +G +
Sbjct: 20 NRTQSADFSMANEKKSKTAGSSSTPARDEQQLTKELDFFRNKKIMNKVKSESTKG----E 75
Query: 285 SSKKSRSKGKEVEQETKDETLENPKKELYRQMERDALS-RKQYNIHVSGNNIPSPLKSFT 461
+ + +E +++ D+ E K + +Q DAL RK Y +VSGN++P P+ SF
Sbjct: 76 GEDEVQEDNQEEDEDHADDETELSGKIITKQ---DALKLRKSYQGNVSGNSVPLPIGSFE 132
Query: 462 ELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPML 641
+L TR+ K +L NL E F EPTPIQ ++IP+LL R+ ACAPTGSGKT AF+ P+L
Sbjct: 133 DLITRFQFDKRLLNNLIENNFTEPTPIQSESIPILLHERDMIACAPTGSGKTLAFLIPLL 192
Query: 642 IK-LKRHSTDGIRAVILSPARELAAQ 716
+ + +T G++ +I+SP +ELA Q
Sbjct: 193 QQIINDKTTVGLKGLIISPTKELANQ 218
>sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Pichia guilliermondii
GN=ROK1 PE=3 SV=2
Length = 537
Score = 112 bits (279), Expect = 3e-024
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Frame = +3
Query: 174 EQQEEEEPEQEQRVSSSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQETKDETLEN 353
++ +P + ++ K K+ S + + D F +++K K++E E +DE +
Sbjct: 14 KRSSNSDPGVKSESQNATKDKQNSLLRQVEKETDFF-NTRKHTEVTKDIEDEAQDEAVPP 72
Query: 354 PKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEP 533
PK E A RKQ ++VSG +IP P+ SF +L R + +L NL G+ EP
Sbjct: 73 PK---ITTEEDAAKLRKQNKVNVSGTDIPLPIGSFEDLIARCNLNRKLLANLIASGYSEP 129
Query: 534 TPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPM---LIKLKRHSTDGIRAVILSPARE 704
T IQ +AIP GR+ ACAPTGSGKT A++ PM LI + GIR V+++P E
Sbjct: 130 TAIQCEAIPASAEGRDLIACAPTGSGKTLAYLIPMAQALISSPKTKNYGIRGVVIAPTNE 189
Query: 705 LAAQ 716
LA Q
Sbjct: 190 LAIQ 193
>sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata
GN=ROK1 PE=3 SV=1
Length = 565
Score = 110 bits (273), Expect = 1e-023
Identities = 56/137 (40%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Frame = +3
Query: 321 EQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYIL 500
+Q+ D+ E E+ + RK Y +++G +IP P+ SF +L +R+ K +L
Sbjct: 77 QQDNNDDVTEVAYDVKITTKEQASALRKSYKGNITGEDIPLPIGSFEDLISRFSLDKRLL 136
Query: 501 RNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIK-LKRHSTDGIR 677
NL E F EPTPIQ +AIP+ L+GR+ ACAPTGSGKT AF+ P+L + ++ + G++
Sbjct: 137 NNLIENHFTEPTPIQCEAIPLCLNGRDLLACAPTGSGKTLAFLIPLLQQIIEEKNFSGVK 196
Query: 678 AVILSPARELAAQTARE 728
+I+SP +ELA Q E
Sbjct: 197 GLIISPTKELATQIFNE 213
>sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=ROK1 PE=3 SV=1
Length = 570
Score = 109 bits (270), Expect = 3e-023
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 7/153 (4%)
Frame = +3
Query: 279 FKSSKKSRSKGKE------VEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIP 440
+ +K++ ++ KE E E K+E +K L E L RK +VSG +IP
Sbjct: 64 YNKAKETHAEDKEDKDNDNEEDEIKEEESLQYQKPLITNDEEAKLLRKSNKSNVSGEDIP 123
Query: 441 SPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTF 620
P+ SF +L TR+ K +L NL F EPTPIQ +AIP+ L+ R+ ACAPTGSGKT
Sbjct: 124 LPIGSFEDLITRFSFDKRLLNNLILNHFTEPTPIQCEAIPLALNNRDMLACAPTGSGKTL 183
Query: 621 AFICPMLIK-LKRHSTDGIRAVILSPARELAAQ 716
AF+ P++ + + T G++ +I+SP +ELA Q
Sbjct: 184 AFLIPLIQQVINDKDTQGLKGLIISPTKELANQ 216
>sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica
GN=ROK1 PE=3 SV=1
Length = 547
Score = 108 bits (268), Expect = 5e-023
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Frame = +3
Query: 219 SSKKRKRKSANSEPVEGFDVFKSSKKSRSKGKEVEQ-ETKDETLENPKKELYRQMERDAL 395
++ K + + + E D FK+ + SK + E+ E +E E + E +
Sbjct: 29 AAPKDTQDNVDIEVARETDFFKTKTDTYSKKRVAEEAELDNEEEEEAPPPIISTPEEAVV 88
Query: 396 SRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSG 575
R ++ I+++G + P P+ SF +L TR+ Y+L NL + + +PTPIQ ++IP +L+G
Sbjct: 89 FRNKHKINITGEDSPLPIGSFEDLITRFNLHPYLLANLKKNKYTDPTPIQCESIPTMLNG 148
Query: 576 RECFACAPTGSGKTFAFICPMLIKL--KRHSTD---GIRAVILSPARELAAQ 716
R+ ACAPTGSGKT A+ PM+ L K+ S D GI+A++++P +ELA+Q
Sbjct: 149 RDLIACAPTGSGKTMAYSIPMVEMLGKKKGSKDAKKGIKALVVAPTKELASQ 200
>sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces
elongisporus GN=ROK1 PE=3 SV=1
Length = 553
Score = 107 bits (267), Expect = 7e-023
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
Frame = +3
Query: 285 SSKKSRSKGKEVEQETKDETLENPKKELYRQMERDA-LSRKQYNIHVSGNNIPSPLKSFT 461
SSK +SK K+ E+E+ E + P EL + E DA + R + V+G++IP P+ SF
Sbjct: 64 SSKILKSKNKDEERESVAEIV--PPLEL--ESEEDARVFRNLHKSKVTGDDIPIPIGSFQ 119
Query: 462 ELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPML 641
++ R+ K +L NL + F EPTPIQ +AIP+ L+ R+ ACAPTGSGKT AF+ P+L
Sbjct: 120 DMIGRFKIDKRVLSNLLDAEFVEPTPIQCEAIPITLANRDLIACAPTGSGKTLAFLIPLL 179
Query: 642 IKLKRHS---TDGIRAVILSPARELAAQ 716
+L + GIR +I+SP ELA Q
Sbjct: 180 QQLVSQNVLKNHGIRGLIISPTNELAVQ 207
>sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces
cerevisiae GN=ROK1 PE=1 SV=1
Length = 564
Score = 106 bits (264), Expect = 2e-022
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Frame = +3
Query: 276 VFKSSKKSRSKGKEVEQETKDETLENP----KKELYRQMERDALSRKQYNIHVSGNNIPS 443
+ + R K E + K+E N K + +E AL RK Y +VSG +IP
Sbjct: 57 IISKVEDDREKTTENDSPNKEEKSGNDDGLIKPVITNTVEASAL-RKSYKGNVSGIDIPL 115
Query: 444 PLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFA 623
P+ SF +L +R+ K +L NL E GF EPTPIQ + IPV L+ R+ AC PTGSGKT A
Sbjct: 116 PIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLA 175
Query: 624 FICPMLIK-LKRHSTDGIRAVILSPARELAAQ 716
F+ P++ + + T G++ +I+SP +ELA Q
Sbjct: 176 FLIPLVQQIIDDKQTAGLKGLIISPTKELANQ 207
>sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces
cerevisiae (strain YJM789) GN=ROK1 PE=3 SV=1
Length = 564
Score = 105 bits (261), Expect = 4e-022
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Frame = +3
Query: 276 VFKSSKKSRSKGKEVEQETKDETLENP----KKELYRQMERDALSRKQYNIHVSGNNIPS 443
+ + R K E + K+E N K + +E AL RK Y +VSG +IP
Sbjct: 57 IISKVEDDREKTTENDSPNKEEKSGNDDGLIKPVITNTVEASAL-RKSYKGNVSGIDIPL 115
Query: 444 PLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFA 623
P+ SF +L +R+ + +L NL E GF EPTPIQ + IPV L+ R+ AC PTGSGKT A
Sbjct: 116 PIGSFEDLISRFSFDRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLA 175
Query: 624 FICPMLIK-LKRHSTDGIRAVILSPARELAAQ 716
F+ P++ + + T G++ +I+SP +ELA Q
Sbjct: 176 FLIPLVQQIIDDKQTAGLKGLIISPTKELANQ 207
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Pichia guilliermondii
GN=DBP10 PE=3 SV=2
Length = 914
Score = 103 bits (255), Expect = 2e-021
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 5/147 (3%)
Frame = +3
Query: 291 KKSRSKGKEVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELS 470
K S S+ K+ + TK E+ P EL + D SR NN K+
Sbjct: 46 KSSSSQNKKPKISTKPESF--PSLEL--SDDEDDESRPSEVAEYFSNNKLQATKAKAGSF 101
Query: 471 TRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKL 650
+G K++L+N+A+ GFK+PTPIQR+ IP+++ R+ A TGSGKT AF+ P++ KL
Sbjct: 102 ASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVEKL 161
Query: 651 KRHSTD-GIRAVILSPARELAAQTARE 728
K HS G+RAVILSP+RELA QT ++
Sbjct: 162 KSHSPKVGVRAVILSPSRELALQTFKQ 188
>sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans
GN=CHR1 PE=3 SV=1
Length = 578
Score = 102 bits (254), Expect = 2e-021
Identities = 65/193 (33%), Positives = 111/193 (57%), Gaps = 14/193 (7%)
Frame = +3
Query: 174 EQQEEEEPEQEQRVSSSKKR-------KRKSANSEPVEGFDVFKSSKKSRSKGKEVE-QE 329
E+Q +++ +++ + + +R ++ ++NS G ++ + +K +++E E
Sbjct: 28 EKQTQKQKHKQESLLNEVERETDFFHTRKHNSNSTTTNGKGDKLTNGANSNKEEQMETNE 87
Query: 330 TKDETLENPKKELYRQMERDALS-RKQYNIHVSGNNIPSPLKSFTELSTRYGCKKYILRN 506
TK + E P EL E DA + R + V+G++IP P+ SF ++ R+ K +L N
Sbjct: 88 TKAKEEEIPPPEL--TTEEDAQTFRNLHKSKVTGDDIPIPIGSFQDMIGRFHINKKVLSN 145
Query: 507 LAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKLKRHSTD---GIR 677
L + F EPTPIQ ++IP+ L+ R+ ACAPTGSGKT AF+ P++ ++ + GIR
Sbjct: 146 LIDNEFIEPTPIQCESIPITLNNRDLIACAPTGSGKTLAFLIPLVQQILSKNVSKNHGIR 205
Query: 678 AVILSPARELAAQ 716
+I+SP ELA Q
Sbjct: 206 GLIISPTNELAVQ 218
>sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida albicans
GN=DBP10 PE=3 SV=1
Length = 908
Score = 101 bits (249), Expect = 9e-021
Identities = 48/100 (48%), Positives = 69/100 (69%)
Frame = +3
Query: 429 NNIPSPLKSFTELSTRYGCKKYILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGS 608
NN P+ K+ +G K+IL N+A+ G+K+PTPIQR+ IP+++ GR+ A TGS
Sbjct: 88 NNNPTAKKAKAGSFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGS 147
Query: 609 GKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTARE 728
GKT AF+ P++ +LK G+RAVILSP+RELA QT ++
Sbjct: 148 GKTAAFVLPLIERLKSRQPGGVRAVILSPSRELALQTYKQ 187
>sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii GN=ROK1
PE=3 SV=1
Length = 569
Score = 99 bits (244), Expect = 3e-020
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Frame = +3
Query: 315 EVEQETKDETLENPKKELYRQMERDALSRKQYNIHVSGNNIPSPLKSFTELSTRYGCKKY 494
E EQ+ E + P + E + R+ Y V+G + P P+ SF +L TR+ K
Sbjct: 76 ETEQDEGAEDVAPPPR--ITTAEEASQLRRSYRGKVTGADAPLPIGSFEDLVTRFKLDKR 133
Query: 495 ILRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTFAFICPMLIKL--KRHSTD 668
+L NL E F EPTPIQ +AIP+ L R+ ACAPTGSGKT AF+ P+L ++ +
Sbjct: 134 LLSNLIENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQVISDKAVGT 193
Query: 669 GIRAVILSPARELAAQ 716
G++ +I+SP +ELA Q
Sbjct: 194 GVKGLIISPTKELANQ 209
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,170,924,377
Number of Sequences: 518415
Number of Extensions: 241170924377
Number of Successful Extensions: 1551573010
Number of sequences better than 0.0: 0
|
