BLASTX 7.6.2
Query= UN73927 /QuerySize=592
(591 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G05960.1 | Symbols: | binding | chr1:1808478-... 235 1e-062
TAIR9_protein||AT1G05960.2 | Symbols: | binding | chr1:1808478-... 235 1e-062
TAIR9_protein||AT5G21080.1 | Symbols: | FUNCTIONS IN: molecular... 62 3e-010
TAIR9_protein||AT2G41830.1 | Symbols: | cyclin-related | chr2:1... 49 2e-006
>TAIR9_protein||AT1G05960.1 | Symbols: | binding | chr1:1808478-1815060
REVERSE
Length = 983
Score = 235 bits (599), Expect = 1e-062
Identities = 121/142 (85%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
Frame = +1
Query: 4 TSLSTNTNPVDVLSINELLESVSETARQVASLPVSSLPVPYDQMMNQCEALVTGKQQKMS 183
TSLSTNTNPVDVLS+NELLESVSETARQVASLPVSS+PVPYDQMMNQCEALVTGKQQKMS
Sbjct: 843 TSLSTNTNPVDVLSVNELLESVSETARQVASLPVSSIPVPYDQMMNQCEALVTGKQQKMS 902
Query: 184 VLRSFKPQSTKAITFSEDDEKEELLLLKETEETDEDDQKALTVAQVQPQGQYSFCSLEAE 363
VLRSFKPQ+TKAIT SED+EK+E LLKETEE EDD+KA+ VA VQPQGQ F S E
Sbjct: 903 VLRSFKPQATKAIT-SEDNEKDEQYLLKETEEAGEDDEKAIIVADVQPQGQLGFFSQEVP 961
Query: 364 QNSFRLPPSSPYDKFLKAAGC* 429
QNSFRLPPSSPYDKFLKAAGC*
Sbjct: 962 QNSFRLPPSSPYDKFLKAAGC* 983
>TAIR9_protein||AT1G05960.2 | Symbols: | binding | chr1:1808478-1815060
REVERSE
Length = 1004
Score = 235 bits (599), Expect = 1e-062
Identities = 121/142 (85%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
Frame = +1
Query: 4 TSLSTNTNPVDVLSINELLESVSETARQVASLPVSSLPVPYDQMMNQCEALVTGKQQKMS 183
TSLSTNTNPVDVLS+NELLESVSETARQVASLPVSS+PVPYDQMMNQCEALVTGKQQKMS
Sbjct: 864 TSLSTNTNPVDVLSVNELLESVSETARQVASLPVSSIPVPYDQMMNQCEALVTGKQQKMS 923
Query: 184 VLRSFKPQSTKAITFSEDDEKEELLLLKETEETDEDDQKALTVAQVQPQGQYSFCSLEAE 363
VLRSFKPQ+TKAIT SED+EK+E LLKETEE EDD+KA+ VA VQPQGQ F S E
Sbjct: 924 VLRSFKPQATKAIT-SEDNEKDEQYLLKETEEAGEDDEKAIIVADVQPQGQLGFFSQEVP 982
Query: 364 QNSFRLPPSSPYDKFLKAAGC* 429
QNSFRLPPSSPYDKFLKAAGC*
Sbjct: 983 QNSFRLPPSSPYDKFLKAAGC* 1004
>TAIR9_protein||AT5G21080.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
cyclin-related (TAIR:AT2G41830.1); Has 203 Blast hits to 200 proteins
in 66 species: Archae - 0; Bacteria - 4; Metazoa - 116; Fungi - 12;
Plants - 64; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
chr5:7158035-7162906 REVERSE
Length = 1026
Score = 62 bits (148), Expect = 3e-010
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Frame = +1
Query: 10 LSTNTNPVDVLSINELLESVSETARQVASLPVSSLP-VPYDQMMNQCEALVTGKQQKMSV 186
+ N +LSI+ELL +VS+T Q+ VS P + Y +M CEAL+ GKQ+KMS
Sbjct: 886 IQPNAKTAFLLSIDELLNAVSQTTAQLGRYSVSDPPDMTYTEMAGHCEALLMGKQEKMSF 945
Query: 187 LRSFKPQSTKAITFSEDDEKEELLLLKETEETDEDDQKALTVAQVQPQGQYSFCSLEAEQ 366
+ S K+ FS KE + L D + + + + + C E +
Sbjct: 946 M------SAKSNKFSSSQTKEAVALPCSGGNPFVDQRSSWEMMGLGAPAASNICVTEYQN 999
Query: 367 NS--FRLPPSSPYDKFLKA 417
F P S+P+D FL A
Sbjct: 1000 QPPFFNPPSSTPFDNFLTA 1018
>TAIR9_protein||AT2G41830.1 | Symbols: | cyclin-related |
chr2:17450431-17456453 REVERSE
Length = 1026
Score = 49 bits (116), Expect = 2e-006
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 DVLSINELLESVSETARQVASLPV-SSLPVPYDQMMNQCEALVTGKQQKMSVLRSFKPQS 210
D+L++N++LESV ET RQV + ++ Y +M CE L+ GKQQK+S L + + +
Sbjct: 881 DLLTVNQILESVVETTRQVGRISFHTAADASYKEMTLHCENLLMGKQQKISSLLNSQLRH 940
Query: 211 TKAITFSEDDEKEEL 255
++ S EE+
Sbjct: 941 ESSVNCSPRQHDEEI 955
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,187,393,229
Number of Sequences: 33410
Number of Extensions: 32187393229
Number of Successful Extensions: 1077085411
Number of sequences better than 0.0: 0
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