BLASTX 7.6.2
Query= UN73973 /QuerySize=596
(595 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA bin... 56 1e-008
TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA bin... 56 1e-008
TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / ... 56 1e-008
TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / ... 56 1e-008
TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 55 4e-008
TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 55 4e-008
TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 55 4e-008
TAIR9_protein||AT4G25520.1 | Symbols: SLK1 | SLK1 (SEUSS-LIKE 1)... 51 4e-007
TAIR9_protein||AT4G25515.1 | Symbols: SLK3 | SLK3 (SEUSS-LIKE 3)... 50 1e-006
>TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 357
Score = 56 bits (134), Expect = 1e-008
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDATN K D+ + V++
Sbjct: 121 GKIVNVRIRRNFA-FIQYEAQEDATRALDATNSSKLMDKVISVEY 164
>TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 358
Score = 56 bits (134), Expect = 1e-008
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDATN K D+ + V++
Sbjct: 121 GKIVNVRIRRNFA-FIQYEAQEDATRALDATNSSKLMDKVISVEY 164
>TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131791-21133318 FORWARD
Length = 330
Score = 56 bits (134), Expect = 1e-008
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDATN K D+ + V++
Sbjct: 94 GKIVNVRIRRNFA-FIQYEAQEDATRALDATNSSKLMDKVISVEY 137
>TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131881-21133318 FORWARD
Length = 325
Score = 56 bits (134), Expect = 1e-008
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDATN K D+ + V++
Sbjct: 88 GKIVNVRIRRNFA-FIQYEAQEDATRALDATNSSKLMDKVISVEY 131
>TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35 |
ATRSP35; RNA binding / nucleic acid binding / nucleotide binding |
chr4:13025168-13027243 FORWARD
Length = 351
Score = 55 bits (130), Expect = 4e-008
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDA+N K D+ + V++
Sbjct: 122 GKIVNVRIRRNFA-FIQYEAQEDATRALDASNNSKLMDKVISVEY 165
>TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13026073-13027243 FORWARD
Length = 310
Score = 55 bits (130), Expect = 4e-008
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDA+N K D+ + V++
Sbjct: 81 GKIVNVRIRRNFA-FIQYEAQEDATRALDASNNSKLMDKVISVEY 124
>TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13025850-13027243 FORWARD
Length = 318
Score = 55 bits (130), Expect = 4e-008
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -1
Query: 559 GKIVNVRIRRNFAFFVQYEGHEDATRALDATN--KREDQ*LKVQF 431
GKIVNVRIRRNFA F+QYE EDATRALDA+N K D+ + V++
Sbjct: 89 GKIVNVRIRRNFA-FIQYEAQEDATRALDASNNSKLMDKVISVEY 132
>TAIR9_protein||AT4G25520.1 | Symbols: SLK1 | SLK1 (SEUSS-LIKE 1); transcription
regulator | chr4:13032450-13035803 REVERSE
Length = 749
Score = 51 bits (121), Expect = 4e-007
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = -3
Query: 443 QSSVPIRGK*LF-----PR-RISKRTCCSSRFYSKYIQCQDPTGRNPQLQALLHQQRLRQ 282
Q SVP+R PR + + + + IQ QDPTGRNPQ+QALL QQRLRQ
Sbjct: 84 QGSVPMRENNYSHVDKKPRLEVKQEDMLQQQILQQLIQRQDPTGRNPQMQALLQQQRLRQ 143
Query: 281 QQQQQQ 264
QQ Q
Sbjct: 144 HQQMLQ 149
>TAIR9_protein||AT4G25515.1 | Symbols: SLK3 | SLK3 (SEUSS-LIKE 3); transcription
regulator | chr4:13028219-13031463 FORWARD
Length = 686
Score = 50 bits (117), Expect = 1e-006
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = -3
Query: 398 ISKRTCCSSRFYSKYIQCQDPTGRNPQLQALLHQQRLRQQQQQQQ 264
+ + + + IQ QDPTGRNPQ+QALL QQR+RQ QQ Q
Sbjct: 77 VKQEDLLQQQILQQLIQRQDPTGRNPQMQALLQQQRVRQHQQMLQ 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,187,393,229
Number of Sequences: 33410
Number of Extensions: 32187393229
Number of Successful Extensions: 1077085411
Number of sequences better than 0.0: 0
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