BLASTX 7.6.2
Query= UN73997 /QuerySize=728
(727 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | CYCD2... 258 4e-069
TAIR9_protein||AT5G65420.1 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN ... 72 3e-013
TAIR9_protein||AT5G10440.1 | Symbols: CYCD4;2 | CYCD4;2 (cyclin ... 67 1e-011
TAIR9_protein||AT1G70210.1 | Symbols: CYCD1;1 | CYCD1;1 (CYCLIN ... 53 1e-007
>TAIR9_protein||AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | CYCD2;1 (Cyclin
D2;1); cyclin-dependent protein kinase regulator/ protein binding |
chr2:9554157-9555873 REVERSE
Length = 362
Score = 258 bits (657), Expect = 4e-069
Identities = 132/175 (75%), Positives = 150/175 (85%), Gaps = 3/175 (1%)
Frame = -2
Query: 726 LNTLNWRLQTLTPFSFIDHFIYKTNGHVSENLIYRSSQFISNTTKAIEFLDFRPSEIAAA 547
+ TLNWRLQ LTPFSFID+F+ K +GHVSENLIYRSS+FI NTTKAIEFLDFRPSEIAAA
Sbjct: 189 VTTLNWRLQALTPFSFIDYFVDKISGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAA 248
Query: 546 AAASVAISGEVNCIDDEKPMSNVTYVKQQERVKACLNLMRDLTGED-VTGATLSPQQPRL 370
AA SV+ISGE CID+EK +S++ YVK QERVK CLNLMR LTGE+ V G +LS +Q R+
Sbjct: 249 AAVSVSISGETECIDEEKALSSLIYVK-QERVKRCLNLMRSLTGEENVRGTSLSQEQARV 307
Query: 369 VARVVPVSPIGVLEATCLSYKSDERTVESCTSSSQSSPD-TNNNNNSNKRRRKQ* 208
R VP SP+GVLEATCLSY+S+ERTVESCT+SSQSSPD NNNNNSNKRRRKQ*
Sbjct: 308 AVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPDNNNNNNNSNKRRRKQ* 362
>TAIR9_protein||AT5G65420.1 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN D4;1);
cyclin-dependent protein kinase regulator | chr5:26141592-26143750
REVERSE
Length = 309
Score = 72 bits (175), Expect = 3e-013
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Frame = -2
Query: 717 LNWRLQTLTPFSFIDHFI---YKTNGHVSENLIYRSSQFISNTTKAIEFLDFRPSEIAAA 547
L WRL+ +TP S+I +F+ K + S LI RS Q I++TTK I+FL+FRPSE+AAA
Sbjct: 173 LKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAA 232
Query: 546 AAASVAISGEVNCID-DEKPMSNVTYVKQQERVKACLNLMRDLTGEDVTGAT 394
A SV SGE+ + D S + + Q+ERVK + M + G D+ T
Sbjct: 233 VALSV--SGELQRVHFDNSSFSPLFSLLQKERVKK-IGEMIESDGSDLCSQT 281
>TAIR9_protein||AT5G10440.1 | Symbols: CYCD4;2 | CYCD4;2 (cyclin d4;2);
cyclin-dependent protein kinase | chr5:3280611-3282342 REVERSE
Length = 299
Score = 67 bits (161), Expect = 1e-011
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = -2
Query: 717 LNWRLQTLTPFSFIDHFIYKTNGHVSE---NLIYRSSQFISNTTKAIEFLDFRPSEIAAA 547
L WRL+ +TP S++ +F+ K NG+ E L+ RS Q I++TTK I+FL+FR SEIAAA
Sbjct: 164 LRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAA 223
Query: 546 AAASVAISGE 517
A SV SGE
Sbjct: 224 VALSV--SGE 231
>TAIR9_protein||AT1G70210.1 | Symbols: CYCD1;1 | CYCD1;1 (CYCLIN D1;1);
cyclin-dependent protein kinase regulator | chr1:26440015-26441980
FORWARD
Length = 340
Score = 53 bits (126), Expect = 1e-007
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Frame = -2
Query: 717 LNWRLQTLTPFSFIDHFIYK--TNGHVSENLIYRSSQFISNTTKAIEFLDFRPSEIAAAA 544
L+WRL+++TPF FI F YK +G I +++ I + K FL++ PS IAAAA
Sbjct: 177 LDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAA 236
Query: 543 AASVA-----ISGEVNCIDDEKPMSNVTYVKQQERVKACLNLMRDLTGEDVTGATLSPQQ 379
VA +S VN + + + +E++ C LM+ + E+ T
Sbjct: 237 ILCVANELPSLSSVVNPHESPETWCDGL---SKEKIVRCYRLMKAMAIENNRLNT----- 288
Query: 378 PRLVARVVPVSPIGVLEATCLSYKSDERTVESCTSSSQSSP 256
P+++A++ + V ++ L+ SDE +S S SSP
Sbjct: 289 PKVIAKL----RVSVRASSTLTRPSDE------SSFSSSSP 319
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,187,393,229
Number of Sequences: 33410
Number of Extensions: 32187393229
Number of Successful Extensions: 1077085411
Number of sequences better than 0.0: 0
|
