BLASTX 7.6.2
Query= UN74028 /QuerySize=647
(646 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8R323|RFC3_MOUSE Replication factor C subunit 3 OS=Mus muscu... 172 2e-042
sp|P40938|RFC3_HUMAN Replication factor C subunit 3 OS=Homo sapi... 170 9e-042
sp|Q2TBV1|RFC3_BOVIN Replication factor C subunit 3 OS=Bos tauru... 169 1e-041
sp|Q54BN3|RFC3_DICDI Probable replication factor C subunit 3 OS=... 153 1e-036
sp|Q8X082|RFC5_NEUCR Replication factor C subunit 5 OS=Neurospor... 144 7e-034
sp|O94697|RFC5_SCHPO Replication factor C subunit 5 OS=Schizosac... 112 2e-024
sp|P38251|RFC5_YEAST Replication factor C subunit 5 OS=Saccharom... 83 1e-015
>sp|Q8R323|RFC3_MOUSE Replication factor C subunit 3 OS=Mus musculus GN=Rfc3
PE=2 SV=1
Length = 356
Score = 172 bits (434), Expect = 2e-042
Identities = 81/141 (57%), Positives = 107/141 (75%)
Frame = -3
Query: 644 LPHGFAARIAEKSNRSLRRAILSLETCRVQNYPFTDNQVISPMDWEEYVAEIAIDMLREQ 465
LP A R+AEKS R+LR+A+L E CRVQ YPFT++Q I DWE Y+ E A ++ +Q
Sbjct: 207 LPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDWEVYLRETANAIVSQQ 266
Query: 464 SPKSLFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQ 285
+P+ L +VRG++YELL +CIPPE+I+K LL ELL D +LK EV AAYYEHR++LG
Sbjct: 267 TPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGS 326
Query: 284 KAIFHIEAFVAKFMSIYKNFL 222
KAI+H+EAFVAKFM++YK F+
Sbjct: 327 KAIYHLEAFVAKFMALYKKFM 347
>sp|P40938|RFC3_HUMAN Replication factor C subunit 3 OS=Homo sapiens GN=RFC3
PE=1 SV=2
Length = 356
Score = 170 bits (429), Expect = 9e-042
Identities = 81/141 (57%), Positives = 106/141 (75%)
Frame = -3
Query: 644 LPHGFAARIAEKSNRSLRRAILSLETCRVQNYPFTDNQVISPMDWEEYVAEIAIDMLREQ 465
LP A R+AEKS R+LR+A+L E CRVQ YPFT +Q I DWE Y+ E A ++ +Q
Sbjct: 207 LPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQ 266
Query: 464 SPKSLFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQ 285
+P+ L +VRG++YELL +CIPPE+I+K LL ELL D +LK EV AAYYEHR++LG
Sbjct: 267 TPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGS 326
Query: 284 KAIFHIEAFVAKFMSIYKNFL 222
KAI+H+EAFVAKFM++YK F+
Sbjct: 327 KAIYHLEAFVAKFMALYKKFM 347
>sp|Q2TBV1|RFC3_BOVIN Replication factor C subunit 3 OS=Bos taurus GN=RFC3 PE=2
SV=1
Length = 356
Score = 169 bits (428), Expect = 1e-041
Identities = 81/141 (57%), Positives = 106/141 (75%)
Frame = -3
Query: 644 LPHGFAARIAEKSNRSLRRAILSLETCRVQNYPFTDNQVISPMDWEEYVAEIAIDMLREQ 465
LP A R+AEKS R+LR+A+L E CRVQ YPFT +Q I DWE Y+ E A ++ +Q
Sbjct: 207 LPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQ 266
Query: 464 SPKSLFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQ 285
+P+ L +VRG++YELL +CIPPE+I+K LL ELL D +LK EV AAYYEHR++LG
Sbjct: 267 TPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGS 326
Query: 284 KAIFHIEAFVAKFMSIYKNFL 222
KAI+H+EAFVAKFM++YK F+
Sbjct: 327 KAIYHLEAFVAKFMALYKKFM 347
>sp|Q54BN3|RFC3_DICDI Probable replication factor C subunit 3 OS=Dictyostelium
discoideum GN=rfc3 PE=3 SV=1
Length = 347
Score = 153 bits (385), Expect = 1e-036
Identities = 70/140 (50%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Frame = -3
Query: 644 LPHGFAARIAEKSNRSLRRAILSLETCRVQNYPFTDNQVISPMDWEEYVAEIAIDMLREQ 465
LP A +A++S +LR A++ LE+ + + YPF + + +DWE Y+++I D EQ
Sbjct: 207 LPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPFQSTE-LPLLDWENYISQIVKDCFEEQ 265
Query: 464 SPKSLFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQ 285
SP L VRGK+YELL +CIPPE+I K LL E+ +KLD +K E+ HWA+YYEHR ++G
Sbjct: 266 SPARLSIVRGKLYELLGHCIPPELIFKTLLLEIFKKLDHNMKFEIIHWASYYEHRSQIGS 325
Query: 284 KAIFHIEAFVAKFMSIYKNF 225
K IFH+EAF+AKFMS+YK +
Sbjct: 326 KPIFHLEAFIAKFMSVYKKY 345
>sp|Q8X082|RFC5_NEUCR Replication factor C subunit 5 OS=Neurospora crassa
GN=B14D6.460 PE=3 SV=1
Length = 352
Score = 144 bits (361), Expect = 7e-034
Identities = 68/140 (48%), Positives = 96/140 (68%)
Frame = -3
Query: 635 GFAARIAEKSNRSLRRAILSLETCRVQNYPFTDNQVISPMDWEEYVAEIAIDMLREQSPK 456
G RIAE+S R+LRRA+L E QN TD+ I P DWE + +IA +++ E +P
Sbjct: 210 GLHQRIAEESGRNLRRALLMYEAVYAQNEKVTDSTPIPPPDWEALIGQIAKEIMEEHTPA 269
Query: 455 SLFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQKAI 276
+ QVR K+Y+LL +CIP +ILK L +L+ +D LK +V +W+A+YEHR+R G K I
Sbjct: 270 RILQVRAKLYDLLTHCIPATIILKTLTFKLIPLIDDALKADVIYWSAFYEHRIRTGTKVI 329
Query: 275 FHIEAFVAKFMSIYKNFLIS 216
FH+EAFVAKFM I++ +L+S
Sbjct: 330 FHLEAFVAKFMRIFEMYLMS 349
>sp|O94697|RFC5_SCHPO Replication factor C subunit 5 OS=Schizosaccharomyces
pombe GN=rfc5 PE=1 SV=1
Length = 358
Score = 112 bits (279), Expect = 2e-024
Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Frame = -3
Query: 620 IAEKSNRSLRRAILSLETCRVQ---NYPFTDNQVISPM-DWEEYVAEIAIDMLREQSPKS 453
IA +R+LR+AIL LET + N D P+ DW+ ++ ++ ML+EQSP
Sbjct: 214 IANNCDRNLRKAILLLETVHAKSPGNKQLIDTGAQLPLPDWQTFIQQVGDSMLQEQSPAR 273
Query: 452 LFQVRGKVYELLVNCIPPEVILKRLLHELLRKLDSELKLEVCHWAAYYEHRMRLGQKAIF 273
+ VR +Y+LL +CIPP ILK LL L K+D++L + AA YEHR R+G K+IF
Sbjct: 274 ILAVRSMLYDLLSHCIPPTTILKELLSFFLSKVDTKLHPYLIQAAANYEHRTRMGNKSIF 333
Query: 272 HIEAFVAKFMSIY 234
H+EAFVA FM +Y
Sbjct: 334 HLEAFVAYFMKVY 346
>sp|P38251|RFC5_YEAST Replication factor C subunit 5 OS=Saccharomyces cerevisiae
GN=RFC5 PE=1 SV=1
Length = 354
Score = 83 bits (204), Expect = 1e-015
Identities = 46/130 (35%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Frame = -3
Query: 623 RIAEKSNRSLRRAILSLETCRVQN-YPFTDNQVISPMDWEEYVAEIAIDMLREQSPKSLF 447
RIA+ SN +LR ++L LE+ + N + I DW + ++ +++E+S SL
Sbjct: 221 RIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLI 280
Query: 446 QVRGKVYELLVNCIPPEVILKRLLHELL--RKLDSELKLEVCHWAAYYEHRMRLGQKAIF 273
+ R +Y+LL +CIP +ILK L LL L++ K + +++ ++ R+ LG KAIF
Sbjct: 281 ECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIF 340
Query: 272 HIEAFVAKFM 243
H+E F+AK M
Sbjct: 341 HLEGFIAKVM 350
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,696,336,112
Number of Sequences: 518415
Number of Extensions: 242696336112
Number of Successful Extensions: 1575376966
Number of sequences better than 0.0: 0
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